RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 ARL6IP5O75915 188 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 ORM2P19652 201 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 CXCL2P19875 107 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 RNASE4P34096 147 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 ZNF138P52744 262 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 TSPAN5P62079 268 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 COX6A2Q02221 97 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 BTN1A1Q13410 526 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 KRTAP6-3Q3LI67 103 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 ASB16-AS1Q495Z4 193 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 GPR107Q5VW38 600 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 LCN15Q6UWW0 184 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 TRGV9Q99603 122 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 SLC50A1Q9BRV3 221 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 KCNIP3Q9Y2W7 256 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 MEIS3P1A6NDR6 274 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 CEBPZOSA8MTT3 80 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 H3BRN7 92 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 TNFAIP8O95379 198 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 IGKV1-5P01602 117 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 MT-ND6P03923 174 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 GPX1P07203 203 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 TBPP20226 339 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 MIAQ16674 131 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 NMSQ5H8A3 153 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 SPANXN2Q5MJ10 180 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 S100A7AQ86SG5 101 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 CYB561D1Q8N8Q1 229 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 RNASE11Q8TAA1 199 aaKnown RBP2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 APH1BQ8WW43 257 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 HIST1H4GQ99525 98 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 ZNF2Q9BSG1 426 aaPredicted RBP2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 SHANK2-AS3Q9BTD1 123 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 KRTAP4-1Q9BYQ7 146 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 AUNIPQ9H7T9 357 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 ZNF331Q9NQX6 463 aaPredicted RBP2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 LINC00474Q9P2X8 69 aa2.34□□□□□ -2.03
ECHDC1-211ENST00000460558 IGLV10-54A0A075B6I4 117 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 SERTM2A0A1B0GWG4 89 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 ANKRD65E5RJM6 399 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 KRTAP4-16G5E9R7 235 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 H0Y9J4 135 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 M0R2P5 195 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 OR4E1P0C645 316 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 GPX4P36969 197 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 DSCR10P59022 87 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 LPCAT3Q6P1A2 487 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 ENHOQ6UWT2 76 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 OR51S1Q8NGJ8 323 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 LHFPL5Q8TAF8 219 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 RETNLBQ9BQ08 111 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 SRRQ9GZT4 340 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 FXYD6Q9H0Q3 95 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 HIGD1AQ9Y241 93 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 PXMP4Q9Y6I8 212 aa2.33□□□□□ -2.04
ECHDC1-211ENST00000460558 IFITM5A6NNB3 132 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 PDCD5O14737 125 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 SNAPINO95295 136 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 ANGP03950 147 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 NMBP08949 121 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 KRTAP1-4P0C5Y4 121 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 MGST1P10620 155 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 CRISP2P16562 243 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 C1orf137Q5JT78 98 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 C9orf129Q5T035 196 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 C1orf146Q5VVC0 180 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 LINC00337Q8N6G1 96 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 OR1S1Q8NH92 325 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 SUN5Q8TC36 379 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 MARCH1Q8TCQ1 289 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 LINC00477Q96M19 166 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 SAMD10Q9BYL1 202 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 SLC39A9Q9NUM3 307 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 CACFD1Q9UGQ2 172 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 POMPQ9Y244 141 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 PKIGQ9Y2B9 76 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 AP4S1Q9Y587 144 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 U3KQ87 197 aa2.32□□□□□ -2.04
ECHDC1-211ENST00000460558 A0A096LNI7 61 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 IGHV3-73A0A0B4J1V6 119 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 LOC100130705A0A1B0GUX0 176 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 TMEM262E9PQX1 116 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 SLC17A3O00476 420 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 HYPMO75409 117 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 IGLV7-43P04211 117 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 OR5G3P0C626 314 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 LINC00694P0DN24 101 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 RPS10P46783 165 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 INPP1P49441 399 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 UBE2MP61081 183 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 TRAM1Q15629 374 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 TMEM91Q6ZNR0 172 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 TMEM252Q8N6L7 170 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 ZFAND2AQ8N6M9 145 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 YIPF6Q96EC8 236 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 FAM19A4Q96LR4 140 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 ATP5SQ99766 215 aa2.31□□□□□ -2.04
ECHDC1-211ENST00000460558 FAM107BQ9H098 131 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms