RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TAAR5O14804 337 aa11.79□□□□□ -0.52
CHCHD3-203ENST00000448878 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
CHCHD3-203ENST00000448878 SCGB1C1Q8TD33 95 aa11.79□□□□□ -0.52
CHCHD3-203ENST00000448878 KLK12Q9UKR0 248 aa11.79□□□□□ -0.52
CHCHD3-203ENST00000448878 LGALSLQ3ZCW2 172 aaPredicted RBP11.78□□□□□ -0.52
CHCHD3-203ENST00000448878 CYB561D1Q8N8Q1 229 aa11.78□□□□□ -0.52
CHCHD3-203ENST00000448878 TMEM75Q8N9X5 138 aa11.78□□□□□ -0.52
CHCHD3-203ENST00000448878 DNAJC30Q96LL9 226 aa11.78□□□□□ -0.52
CHCHD3-203ENST00000448878 C11orf21Q9P2W6 132 aa11.78□□□□□ -0.52
CHCHD3-203ENST00000448878 A0A087WWC5 75 aa11.77□□□□□ -0.53
CHCHD3-203ENST00000448878 A0A1W2PPV4 95 aa11.77□□□□□ -0.53
CHCHD3-203ENST00000448878 GCGP01275 180 aa11.77□□□□□ -0.53
CHCHD3-203ENST00000448878 ZNF80P51504 273 aaPredicted RBP11.77□□□□□ -0.53
CHCHD3-203ENST00000448878 UBE2WQ96B02 151 aa11.77□□□□□ -0.53
CHCHD3-203ENST00000448878 C9orf85Q96MD7 179 aa11.77□□□□□ -0.53
CHCHD3-203ENST00000448878 FAM240BA0A1B0GVZ2 78 aa11.76□□□□□ -0.53
CHCHD3-203ENST00000448878 HMGB3O15347 200 aaKnown RBP11.76□□□□□ -0.53
CHCHD3-203ENST00000448878 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
CHCHD3-203ENST00000448878 S100A4P26447 101 aaKnown RBP11.76□□□□□ -0.53
CHCHD3-203ENST00000448878 SAMD10Q9BYL1 202 aa11.76□□□□□ -0.53
CHCHD3-203ENST00000448878 SMIM3Q9BZL3 60 aa11.76□□□□□ -0.53
CHCHD3-203ENST00000448878 FGF8P55075 233 aaPredicted RBP11.75□□□□□ -0.53
CHCHD3-203ENST00000448878 ZFP69Q49AA0 526 aa11.75□□□□□ -0.53
CHCHD3-203ENST00000448878 KCNIP4Q6PIL6 250 aa11.75□□□□□ -0.53
CHCHD3-203ENST00000448878 ARL6IP6Q8N6S5 226 aa11.75□□□□□ -0.53
CHCHD3-203ENST00000448878 PARLQ9H300 379 aa11.75□□□□□ -0.53
CHCHD3-203ENST00000448878 Q9UF83 564 aa11.75□□□□□ -0.53
CHCHD3-203ENST00000448878 A0A087WX48 190 aa11.74□□□□□ -0.53
CHCHD3-203ENST00000448878 A8MWV9 139 aa11.74□□□□□ -0.53
CHCHD3-203ENST00000448878 H0YIZ8 118 aa11.74□□□□□ -0.53
CHCHD3-203ENST00000448878 K7EQM0 130 aa11.74□□□□□ -0.53
CHCHD3-203ENST00000448878 RNASE3P12724 160 aaKnown RBP11.74□□□□□ -0.53
CHCHD3-203ENST00000448878 PQLC2Q6ZP29 291 aa11.74□□□□□ -0.53
CHCHD3-203ENST00000448878 SMUG1Q53HV7 270 aa11.73□□□□□ -0.53
CHCHD3-203ENST00000448878 ZFP2Q6ZN57 461 aa11.73□□□□□ -0.53
CHCHD3-203ENST00000448878 NIT1Q86X76 327 aa11.73□□□□□ -0.53
CHCHD3-203ENST00000448878 C14orf178Q8N769 122 aaPredicted RBP11.73□□□□□ -0.53
CHCHD3-203ENST00000448878 PTH2Q96A98 100 aa11.73□□□□□ -0.53
CHCHD3-203ENST00000448878 PSG8Q9UQ74 426 aa11.73□□□□□ -0.53
CHCHD3-203ENST00000448878 ELOBQ15370 118 aa11.72□□□□□ -0.53
CHCHD3-203ENST00000448878 PRNTQ86SH4 94 aa11.72□□□□□ -0.53
CHCHD3-203ENST00000448878 JPT2Q9H910 190 aa11.72□□□□□ -0.53
CHCHD3-203ENST00000448878 FAT3Q8TDW7 4589 aa11.71□□□□□ -0.53
CHCHD3-203ENST00000448878 SERTM2A0A1B0GWG4 89 aa11.71□□□□□ -0.53
CHCHD3-203ENST00000448878 IGLV2-11P01706 119 aa11.71□□□□□ -0.53
CHCHD3-203ENST00000448878 LINC00694P0DN24 101 aa11.71□□□□□ -0.53
CHCHD3-203ENST00000448878 CYCSP99999 105 aaKnown RBP11.71□□□□□ -0.53
CHCHD3-203ENST00000448878 C14orf177Q52M58 125 aa11.71□□□□□ -0.53
CHCHD3-203ENST00000448878 DAZAP1Q96EP5 407 aaKnown RBP11.71□□□□□ -0.53
CHCHD3-203ENST00000448878 HSPB11Q9Y547 144 aa11.71□□□□□ -0.53
CHCHD3-203ENST00000448878 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
CHCHD3-203ENST00000448878 TCRAP04437 139 aa11.7□□□□□ -0.54
CHCHD3-203ENST00000448878 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
CHCHD3-203ENST00000448878 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
CHCHD3-203ENST00000448878 MZT2BQ6NZ67 158 aa11.7□□□□□ -0.54
CHCHD3-203ENST00000448878 OR2G3Q8NGZ4 309 aa11.7□□□□□ -0.54
CHCHD3-203ENST00000448878 RAB2AP61019 212 aa11.69□□□□□ -0.54
CHCHD3-203ENST00000448878 FLI1Q01543 452 aaPredicted RBP11.69□□□□□ -0.54
CHCHD3-203ENST00000448878 FAM74A4Q5TZK3 123 aa11.69□□□□□ -0.54
CHCHD3-203ENST00000448878 C5orf17Q8NAS9 161 aa11.69□□□□□ -0.54
CHCHD3-203ENST00000448878 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
CHCHD3-203ENST00000448878 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
CHCHD3-203ENST00000448878 LINC00479Q96M42 142 aa11.69□□□□□ -0.54
CHCHD3-203ENST00000448878 C1orf43Q9BWL3 253 aa11.69□□□□□ -0.54
CHCHD3-203ENST00000448878 ARL14EPLP0DKL9 152 aa11.68□□□□□ -0.54
CHCHD3-203ENST00000448878 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
CHCHD3-203ENST00000448878 ASIPP42127 132 aa11.68□□□□□ -0.54
CHCHD3-203ENST00000448878 Q0VG73 95 aa11.68□□□□□ -0.54
CHCHD3-203ENST00000448878 PPP1R1CQ8WVI7 109 aa11.68□□□□□ -0.54
CHCHD3-203ENST00000448878 SUMO1P63165 101 aaKnown RBP11.67□□□□□ -0.54
CHCHD3-203ENST00000448878 HLA-DQA1P01909 254 aa11.66□□□□□ -0.54
CHCHD3-203ENST00000448878 CRPP02741 224 aa11.66□□□□□ -0.54
CHCHD3-203ENST00000448878 SAPCD1Q5SSQ6 148 aa11.66□□□□□ -0.54
CHCHD3-203ENST00000448878 LINC00299Q6ZSB3 139 aa11.66□□□□□ -0.54
CHCHD3-203ENST00000448878 IGKV3D-20A0A0C4DH25 116 aa11.65□□□□□ -0.54
CHCHD3-203ENST00000448878 H3BVH4 76 aa11.65□□□□□ -0.54
CHCHD3-203ENST00000448878 RHODO00212 210 aa11.65□□□□□ -0.54
CHCHD3-203ENST00000448878 PET100P0DJ07 73 aa11.65□□□□□ -0.54
CHCHD3-203ENST00000448878 CDC34P49427 236 aaPredicted RBP11.65□□□□□ -0.54
CHCHD3-203ENST00000448878 PIK3CD-AS1Q5SR53 167 aa11.65□□□□□ -0.54
CHCHD3-203ENST00000448878 ENKURQ8TC29 256 aa11.65□□□□□ -0.54
CHCHD3-203ENST00000448878 CHCHD7Q9BUK0 85 aa11.65□□□□□ -0.54
CHCHD3-203ENST00000448878 CCDC32Q9BV29 185 aa11.65□□□□□ -0.54
CHCHD3-203ENST00000448878 A0A087WWL8 130 aa11.64□□□□□ -0.55
CHCHD3-203ENST00000448878 FABP5P3A8MUU1 101 aa11.64□□□□□ -0.55
CHCHD3-203ENST00000448878 UFSP1Q6NVU6 142 aa11.64□□□□□ -0.55
CHCHD3-203ENST00000448878 C15orf54Q8N8G6 183 aa11.64□□□□□ -0.55
CHCHD3-203ENST00000448878 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
CHCHD3-203ENST00000448878 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
CHCHD3-203ENST00000448878 B4DEV8 164 aa11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 USP17L23D6RBM5 183 aa11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 MPC2O95563 127 aa11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 H2BFSP57053 126 aa11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 RPL36AP83881 106 aaKnown RBP11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 ATRAIDQ6UW56 229 aa11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 S100ZQ8WXG8 99 aa11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 RPL36ALQ969Q0 106 aaKnown RBP11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 ZC2HC1AQ96GY0 325 aa11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 IL36BQ9NZH7 164 aa11.63□□□□□ -0.55
CHCHD3-203ENST00000448878 TRAV34A0A0B4J273 112 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms