RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 OTORQ9NRC9 128 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 ZNF586Q9NXT0 402 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 S4R3C0 116 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 TET2Q6N021 2002 aaPredicted RBP2.73□□□□□ -1.97
VPS29-202ENST00000447578 TRAV30A0A087WSZ9 112 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 A0A1B0GV90 55 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 HIGD1CA8MV81 97 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 A8MWP6 167 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 ODF3BA8MYP8 253 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 NDUFC2-KCTD14E9PQ53 114 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 H3BRN7 92 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 GNG7O60262 68 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 NDUFA3O95167 84 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 LTAP01374 205 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 IGKV1-17P01599 117 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 TRBV12-3P01733 135 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 HLA-DRB1P01911 266 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 IL4P05112 153 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 TLX1NBP0CAT3 122 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 PRB4P10163 310 aaPredicted RBP2.72□□□□□ -1.97
VPS29-202ENST00000447578 NTF3P20783 257 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 PRTN3P24158 256 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 C1orf194Q5T5A4 169 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 GDF5OSQ5U4N7 250 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 RASL11AQ6T310 242 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 LINC00322Q6ZN03 302 aaPredicted RBP2.72□□□□□ -1.97
VPS29-202ENST00000447578 GOLT1AQ6ZVE7 132 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 VMO1Q7Z5L0 202 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 Q86TA4 180 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 BPIFA4PQ86YQ2 179 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 DYNAPQ8N1N2 210 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 SMIM12Q96EX1 92 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 KCNS1Q96KK3 526 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 FAM19A4Q96LR4 140 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 CAMK2N2Q96S95 79 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 SHANK2-AS3Q9BTD1 123 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 PRORYQ9H606 182 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 MRPL27Q9P0M9 148 aaKnown RBP2.72□□□□□ -1.97
VPS29-202ENST00000447578 TMEM14CQ9P0S9 112 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 ZNF492Q9P255 531 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 TBL2Q9Y4P3 447 aaKnown RBP2.72□□□□□ -1.97
VPS29-202ENST00000447578 ARID1AO14497 2285 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 AHCTF1Q8WYP5 2266 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 PCNX2A6NKB5 2137 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 KIAA2026Q5HYC2 2103 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 DYSFO75923 2080 aa2.72□□□□□ -1.97
VPS29-202ENST00000447578 TRBV19A0A075B6N1 114 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 TRAV8-1A0A0A6YYK1 113 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 TRAV8-6A0A0B4J262 113 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 TRBV6-1A0A0K0K1D8 114 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 A0A1B0GXF2 115 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 WI2-2373I1.2A0A1W2PRP0 233 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 C19orf71A6NCJ1 209 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 A8MWL6 223 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 OOSP1A8MZH6 123 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 PANO1I0J062 215 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 PSPHP1O15172 72 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 ZNF324O75467 553 aaPredicted RBP2.71□□□□□ -1.98
VPS29-202ENST00000447578 BRI3O95415 125 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 GPX1P07203 203 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 IGLC2P0DOY2 106 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 HBBP68871 147 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 MPV17L2Q567V2 206 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 TTC32Q5I0X7 151 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 MINOS1Q5TGZ0 78 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 ZNF705AQ6ZN79 300 aaPredicted RBP2.71□□□□□ -1.98
VPS29-202ENST00000447578 ATP5L2Q7Z4Y8 100 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 FAM19A1Q7Z5A9 133 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 FAM19A2Q8N3H0 131 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 TTC9CQ8N5M4 171 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 OR4B1Q8NGF8 309 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 OR2D3Q8NGH3 330 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 C18orf32Q8TCD1 76 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 FAM104AQ969W3 186 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 BORCS7Q96B45 105 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 C2orf88Q9BSF0 95 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 VAMP8Q9BV40 100 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 C21orf62Q9NYP8 219 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 SOX21Q9Y651 276 aaPredicted RBP2.71□□□□□ -1.98
VPS29-202ENST00000447578 MINOS1-NBL1R4GNA1 71 aa2.71□□□□□ -1.98
VPS29-202ENST00000447578 TNRC18O15417 2968 aaPredicted RBP2.7□□□□□ -1.98
VPS29-202ENST00000447578 CNTRLQ7Z7A1 2325 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 DSCAMO60469 2012 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 IGKV2-40A0A087WW87 121 aaPredicted RBP2.7□□□□□ -1.98
VPS29-202ENST00000447578 OR2T8A6NH00 312 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 M0R143 59 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 M0R2Z0 102 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 M0R3E3 92 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 IGKV2D-40P01614 121 aaPredicted RBP2.7□□□□□ -1.98
VPS29-202ENST00000447578 C3orf79P0CE67 100 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 CSN1S1P47710 185 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 EFNA4P52798 201 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 FOXA3P55318 350 aaPredicted RBP2.7□□□□□ -1.98
VPS29-202ENST00000447578 EBI3Q14213 229 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 TDRG1Q3Y452 100 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 C6orf99Q4VX62 202 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 C5orf47Q569G3 176 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 UNQ5815/PRO19632Q6UWF5 114 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 S100A7AQ86SG5 101 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms