RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SAMD13Q5VXD3 122 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 UNQ9165/PRO28630Q6UXU0 137 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 Q6ZN92 141 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 UBE2DNLQ8IWF7 75 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 RNASE8Q8TDE3 154 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 XCL2Q9UBD3 114 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 MXRA5Q9NR99 2828 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 NHLRC4P0CG21 123 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 UBE2V1Q13404 147 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 LINC01587Q99440 93 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 TRAV25A0A0B4J276 109 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 IGLC6P0CF74 106 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 ZNF138P52744 262 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 FXYD7P58549 80 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 RPL19P84098 196 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 hDV102S1A0JD36 115 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 P01737 135 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 CAMPP49913 170 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 PRR27Q6MZM9 219 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 OR2D3Q8NGH3 330 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 TIMM8BQ9Y5J9 83 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 CSMD2Q7Z408 3487 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 OR5AL1P0C617 328 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 C8orf49Q96NF6 230 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 CSTL1Q9H114 145 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 KNCNA6PVL3 124 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 TNFRSF6BO95407 300 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 CTSGP08311 255 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 ZNF80P51504 273 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 RPS20P60866 119 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 PDE6HQ13956 83 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 OR2K2Q8NGT1 345 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 RNF185Q96GF1 192 aa5.54□□□□□ -1.52
CDC42BPA-208ENST00000442054 NF1P21359 2839 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 DUSP14O95147 198 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 NTF3P20783 257 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 HNRNPA3P51991 378 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 SAMD5Q5TGI4 173 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 RNASEKQ6P5S7 137 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 BORCS7Q96B45 105 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 CCDC140Q96MF4 163 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 SIGLEC8Q9NYZ4 499 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 HSBP1O75506 76 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 GOLT1AQ6ZVE7 132 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 IGLV2-18A0A075B6J9 118 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 CBY3A6NI87 242 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 S100A4P26447 101 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 HINT1P49773 126 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 C19orf54Q5BKX5 351 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 TMEM78Q5T7P6 136 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 MS4A6AQ9H2W1 248 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 ZNF580Q9UK33 172 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 PSG8Q9UQ74 426 aa5.53□□□□□ -1.52
CDC42BPA-208ENST00000442054 A0A1B0GW15 77 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 A4D1N5 150 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 K7EMT4 169 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 CSN3P07498 182 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 COX8AP10176 69 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 MPV17L2Q567V2 206 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 UFSP1Q6NVU6 142 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 WFDC10AQ9H1F0 79 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 KLK5Q9Y337 293 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 CHEK1O14757 476 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 IGLV1-51P01701 117 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 OR11H2Q8NH07 326 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 A0A1B0GUT8 65 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 TMEM213A2RRL7 107 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 TMEM238C9JI98 176 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 LGALS9O00182 355 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 GAS8-AS1O95177 125 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 FAM162BQ5T6X4 162 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 ADAMTSL5Q6ZMM2 481 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 ZFAND3Q9H8U3 227 aa5.52□□□□□ -1.53
CDC42BPA-208ENST00000442054 K7EIL1 84 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 M0R3E3 92 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 LEPROTL1O95214 131 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 FAM104BQ5XKR9 115 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 PRNTQ86SH4 94 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 RNF152Q8N8N0 203 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 A0A087X0K7 114 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 DEFB4AO15263 64 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 CT45A10P0DMU9 189 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 PRB4P10163 310 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 BEAN1Q3B7T3 259 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 WWC2-AS2Q96NR7 200 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 SPRY2O43597 315 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 CRIP2P52943 208 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 Q6AWC8 147 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 BOD1L2Q8IYS8 172 aa5.51□□□□□ -1.53
CDC42BPA-208ENST00000442054 IFI27P40305 119 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 SH2D1AO60880 128 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 DEFB130BP0DP73 79 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 DEFB130AP0DP74 79 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 KIR3DS1Q14943 382 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 MRPL51Q4U2R6 128 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 ATP6V0BQ99437 205 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 HHLA3Q9XRX5 114 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 TRGV2A0A075B6R0 118 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 MUC21A0A0G2JKD1 596 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms