RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 Q9HAA7 133 aa13.89□□□□□ -0.19
CPNE1-219ENST00000440240 SRRM2Q9UQ35 2752 aaKnown RBP13.88□□□□□ -0.19
CPNE1-219ENST00000440240 PGPEP1LA6NFU8 196 aa13.88□□□□□ -0.19
CPNE1-219ENST00000440240 CXorf1O96002 111 aa13.88□□□□□ -0.19
CPNE1-219ENST00000440240 IGLV2-11P01706 119 aa13.88□□□□□ -0.19
CPNE1-219ENST00000440240 SMR3BP02814 79 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-219ENST00000440240 ZNF506Q5JVG8 444 aa13.88□□□□□ -0.19
CPNE1-219ENST00000440240 CYB561D1Q8N8Q1 229 aa13.88□□□□□ -0.19
CPNE1-219ENST00000440240 IGHV3-30P01768 117 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 IGHV3-33P01772 117 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 IGHV3-30-3P0DP02 117 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 IGHV3-30-5P0DP03 117 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 RNASE3P12724 160 aaKnown RBP13.87□□□□□ -0.19
CPNE1-219ENST00000440240 ATP6V0CP27449 155 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 Q8N814 137 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 TMEM75Q8N9X5 138 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 AQP10Q96PS8 301 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 TM2D2Q9BX73 214 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 ACTR3CQ9C0K3 210 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-219ENST00000440240 TNFSF18Q9UNG2 199 aa13.87□□□□□ -0.19
CPNE1-219ENST00000440240 GGTLC3B5MD39 225 aa13.86□□□□□ -0.19
CPNE1-219ENST00000440240 LAGE3Q14657 143 aa13.86□□□□□ -0.19
CPNE1-219ENST00000440240 ALG5Q9Y673 324 aa13.86□□□□□ -0.19
CPNE1-219ENST00000440240 PIK3CD-AS1Q5SR53 167 aa13.85□□□□□ -0.19
CPNE1-219ENST00000440240 ZFP2Q6ZN57 461 aa13.85□□□□□ -0.19
CPNE1-219ENST00000440240 A0A1W2PRE2 83 aa13.84□□□□□ -0.19
CPNE1-219ENST00000440240 A8MWV9 139 aa13.84□□□□□ -0.19
CPNE1-219ENST00000440240 S100A4P26447 101 aaKnown RBP13.84□□□□□ -0.19
CPNE1-219ENST00000440240 FABP5P3A8MUU1 101 aa13.83□□□□□ -0.2
CPNE1-219ENST00000440240 FLG2Q5D862 2391 aaPredicted RBP13.83□□□□□ -0.2
CPNE1-219ENST00000440240 VPS13BQ7Z7G8 4022 aa13.82□□□□□ -0.2
CPNE1-219ENST00000440240 C1QBP02746 253 aa13.82□□□□□ -0.2
CPNE1-219ENST00000440240 LGALSLQ3ZCW2 172 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-219ENST00000440240 Q6ZSN1 163 aa13.82□□□□□ -0.2
CPNE1-219ENST00000440240 MED28Q9H204 178 aa13.82□□□□□ -0.2
CPNE1-219ENST00000440240 PARLQ9H300 379 aa13.82□□□□□ -0.2
CPNE1-219ENST00000440240 TRAV8-3A0A0A6YYJ7 113 aa13.81□□□□□ -0.2
CPNE1-219ENST00000440240 IGKV3D-20A0A0C4DH25 116 aa13.81□□□□□ -0.2
CPNE1-219ENST00000440240 LINC00479Q96M42 142 aa13.81□□□□□ -0.2
CPNE1-219ENST00000440240 MYCBP2O75592 4640 aa13.81□□□□□ -0.2
CPNE1-219ENST00000440240 A0A087WWC5 75 aa13.8□□□□□ -0.2
CPNE1-219ENST00000440240 IFNA7P01567 189 aa13.8□□□□□ -0.2
CPNE1-219ENST00000440240 ASIPP42127 132 aa13.8□□□□□ -0.2
CPNE1-219ENST00000440240 HAMPP81172 84 aa13.8□□□□□ -0.2
CPNE1-219ENST00000440240 TOR2AQ5JU69 321 aa13.8□□□□□ -0.2
CPNE1-219ENST00000440240 INO80EQ8NBZ0 244 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-219ENST00000440240 IL36BQ9NZH7 164 aa13.8□□□□□ -0.2
CPNE1-219ENST00000440240 TRAV34A0A0B4J273 112 aa13.79□□□□□ -0.2
CPNE1-219ENST00000440240 GAGE12JA6NER3 117 aa13.79□□□□□ -0.2
CPNE1-219ENST00000440240 FGF8P55075 233 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-219ENST00000440240 GAGE1Q13065 139 aa13.79□□□□□ -0.2
CPNE1-219ENST00000440240 GAGE4Q13068 117 aa13.79□□□□□ -0.2
CPNE1-219ENST00000440240 GAGE5Q13069 117 aa13.79□□□□□ -0.2
CPNE1-219ENST00000440240 GAGE13Q4V321 117 aa13.79□□□□□ -0.2
CPNE1-219ENST00000440240 OR2T35Q8NGX2 323 aa13.79□□□□□ -0.2
CPNE1-219ENST00000440240 NKX6-2Q9C056 277 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-219ENST00000440240 ARL2-SNX15V9GYD0 113 aa13.79□□□□□ -0.2
CPNE1-219ENST00000440240 BORCS7-ASMTA0A0B4J1R7 106 aa13.78□□□□□ -0.2
CPNE1-219ENST00000440240 LINC00694P0DN24 101 aa13.77□□□□□ -0.21
CPNE1-219ENST00000440240 Q5BKY6 102 aa13.77□□□□□ -0.21
CPNE1-219ENST00000440240 HIST1H2BAQ96A08 127 aa13.77□□□□□ -0.21
CPNE1-219ENST00000440240 FAM30AQ9NZY2 134 aa13.77□□□□□ -0.21
CPNE1-219ENST00000440240 COX11Q9Y6N1 276 aa13.77□□□□□ -0.21
CPNE1-219ENST00000440240 CTXND1A0A1B0GTU2 59 aa13.76□□□□□ -0.21
CPNE1-219ENST00000440240 B4DEV8 164 aa13.76□□□□□ -0.21
CPNE1-219ENST00000440240 PEX7O00628 323 aa13.76□□□□□ -0.21
CPNE1-219ENST00000440240 PTTG1O95997 202 aa13.76□□□□□ -0.21
CPNE1-219ENST00000440240 GIPP09681 153 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-219ENST00000440240 RPL7L1Q6DKI1 246 aaKnown RBP13.76□□□□□ -0.21
CPNE1-219ENST00000440240 SYT8Q8NBV8 401 aa13.76□□□□□ -0.21
CPNE1-219ENST00000440240 RHODO00212 210 aa13.75□□□□□ -0.21
CPNE1-219ENST00000440240 ZNF726P1Q15940 193 aa13.75□□□□□ -0.21
CPNE1-219ENST00000440240 DNLZQ5SXM8 178 aa13.75□□□□□ -0.21
CPNE1-219ENST00000440240 DMRTA1Q5VZB9 504 aa13.75□□□□□ -0.21
CPNE1-219ENST00000440240 UFSP1Q6NVU6 142 aa13.75□□□□□ -0.21
CPNE1-219ENST00000440240 DAZ4Q86SG3 579 aaKnown RBP13.75□□□□□ -0.21
CPNE1-219ENST00000440240 Q8N3U1 123 aa13.75□□□□□ -0.21
CPNE1-219ENST00000440240 JPT2Q9H910 190 aa13.75□□□□□ -0.21
CPNE1-219ENST00000440240 DAZ3Q9NR90 486 aaKnown RBP13.75□□□□□ -0.21
CPNE1-219ENST00000440240 ZFP30Q9Y2G7 519 aa13.75□□□□□ -0.21
CPNE1-219ENST00000440240 SEC11BP0C7V7 166 aa13.74□□□□□ -0.21
CPNE1-219ENST00000440240 UBE2G2P60604 165 aa13.74□□□□□ -0.21
CPNE1-219ENST00000440240 SAMD10Q9BYL1 202 aa13.74□□□□□ -0.21
CPNE1-219ENST00000440240 Q9UF83 564 aa13.74□□□□□ -0.21
CPNE1-219ENST00000440240 URGCP-MRPS24S4R325 110 aa13.74□□□□□ -0.21
CPNE1-219ENST00000440240 DNAH8Q96JB1 4490 aa13.74□□□□□ -0.21
CPNE1-219ENST00000440240 RNF222A6NCQ9 220 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 FAM74A7A6NL05 159 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 KRBOX1C9JBD0 128 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 H3BVH4 76 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 ARMS2P0C7Q2 107 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 CRIP1P50238 77 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 WFDC2Q14508 124 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 COX8CQ7Z4L0 72 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 Q86TA4 180 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 C14orf178Q8N769 122 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-219ENST00000440240 OR11H4Q8NGC9 324 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 RMI2Q96E14 147 aa13.73□□□□□ -0.21
CPNE1-219ENST00000440240 AKR1C8PQ5T2L2 129 aa13.72□□□□□ -0.21
CPNE1-219ENST00000440240 BATF3Q9NR55 127 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms