RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-203ENST00000429416 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
SMARCA4-203ENST00000429416 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
SMARCA4-203ENST00000429416 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
SMARCA4-203ENST00000429416 FAM104BQ5XKR9 115 aa13.17□□□□□ -0.3
SMARCA4-203ENST00000429416 KLF5Q13887 457 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-203ENST00000429416 LAMTOR2Q9Y2Q5 125 aa13.17□□□□□ -0.3
SMARCA4-203ENST00000429416 C10orf99Q6UWK7 81 aa13.16□□□□□ -0.3
SMARCA4-203ENST00000429416 C2orf66Q6UXQ4 117 aa13.16□□□□□ -0.3
SMARCA4-203ENST00000429416 FSTL3O95633 263 aa13.16□□□□□ -0.3
SMARCA4-203ENST00000429416 CTAG1AP78358 180 aa13.16□□□□□ -0.3
SMARCA4-203ENST00000429416 IGHV1-24A0A0C4DH33 117 aa13.15□□□□□ -0.3
SMARCA4-203ENST00000429416 GHRHP01286 108 aa13.15□□□□□ -0.3
SMARCA4-203ENST00000429416 HILS1P60008 231 aa13.15□□□□□ -0.3
SMARCA4-203ENST00000429416 LINC01006Q8NI28 216 aa13.15□□□□□ -0.3
SMARCA4-203ENST00000429416 PFN2P35080 140 aa13.15□□□□□ -0.3
SMARCA4-203ENST00000429416 LENEPQ9Y5L5 61 aa13.15□□□□□ -0.31
SMARCA4-203ENST00000429416 FAM231BA6NCW3 169 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 IGHV3-30P01768 117 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 IGHV3-33P01772 117 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 IGHV3-30-3P0DP02 117 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 IGHV3-30-5P0DP03 117 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 MRPL36Q9P0J6 103 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 INS-IGF2F8WCM5 200 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 CT83Q5H943 113 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 MORN5Q5VZ52 161 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 C1orf43Q9BWL3 253 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 EGR2P11161 476 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 IGLV2-14P01704 120 aa13.14□□□□□ -0.31
SMARCA4-203ENST00000429416 RBAKDNA6NC62 111 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 TMEM238C9JI98 176 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 LINC01559Q495D7 138 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 PATE2Q6UY27 113 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 RNF152Q8N8N0 203 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 ARHGAP21Q5T5U3 1957 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 RNASE13Q5GAN3 156 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 GATD1Q8NB37 220 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 IGF1P05019 195 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 MRPL51Q4U2R6 128 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 NHP2Q9NX24 153 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 POLQO75417 2590 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 MYMXA0A1B0GTQ4 84 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 PAX2Q02962 417 aa13.13□□□□□ -0.31
SMARCA4-203ENST00000429416 PROP1O75360 226 aa13.12□□□□□ -0.31
SMARCA4-203ENST00000429416 XCL1P47992 114 aa13.12□□□□□ -0.31
SMARCA4-203ENST00000429416 IL17DQ8TAD2 202 aa13.12□□□□□ -0.31
SMARCA4-203ENST00000429416 PRAC2D3DTV9 90 aa13.12□□□□□ -0.31
SMARCA4-203ENST00000429416 NXPH4O95158 308 aa13.12□□□□□ -0.31
SMARCA4-203ENST00000429416 NKAPP1Q8N9T2 125 aa13.12□□□□□ -0.31
SMARCA4-203ENST00000429416 ATP6V0E2Q8NHE4 81 aa13.12□□□□□ -0.31
SMARCA4-203ENST00000429416 CCDC140Q96MF4 163 aa13.12□□□□□ -0.31
SMARCA4-203ENST00000429416 TYMSP04818 313 aa13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 FN1P02751 2386 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 WI2-2373I1.2A0A1W2PRP0 233 aa13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 CHAC1Q9BUX1 264 aa13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 SIGLEC8Q9NYZ4 499 aa13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 DDTP30046 118 aa13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 C11orf45Q8TAV5 145 aa13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 MAP6D1Q9H9H5 199 aa13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 ARHGAP32A7KAX9 2087 aa13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 LINC00574Q9H8X3 128 aa13.11□□□□□ -0.31
SMARCA4-203ENST00000429416 PRSS29PA6NIE9 313 aa13.1□□□□□ -0.31
SMARCA4-203ENST00000429416 ZC2HC1BQ5TFG8 222 aa13.1□□□□□ -0.31
SMARCA4-203ENST00000429416 LINC00482Q8N8I6 264 aa13.1□□□□□ -0.31
SMARCA4-203ENST00000429416 LRP4O75096 1905 aa13.1□□□□□ -0.31
SMARCA4-203ENST00000429416 C9JQL5 133 aa13.1□□□□□ -0.31
SMARCA4-203ENST00000429416 LTAP01374 205 aa13.1□□□□□ -0.31
SMARCA4-203ENST00000429416 FAM110AQ9BQ89 295 aa13.1□□□□□ -0.31
SMARCA4-203ENST00000429416 PRB2P02812 416 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-203ENST00000429416 ZNF295-AS1Q8N0V1 137 aa13.09□□□□□ -0.31
SMARCA4-203ENST00000429416 Q8N1Y9 231 aa13.09□□□□□ -0.31
SMARCA4-203ENST00000429416 A0A1W2PPR1 153 aa13.09□□□□□ -0.31
SMARCA4-203ENST00000429416 IL15RAQ13261 267 aa13.09□□□□□ -0.31
SMARCA4-203ENST00000429416 MBD6Q96DN6 1003 aa13.09□□□□□ -0.31
SMARCA4-203ENST00000429416 FLNBO75369 2602 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-203ENST00000429416 AVPP01185 164 aa13.09□□□□□ -0.31
SMARCA4-203ENST00000429416 IGLV10-54A0A075B6I4 117 aa13.08□□□□□ -0.31
SMARCA4-203ENST00000429416 Q8N8P6 123 aa13.08□□□□□ -0.31
SMARCA4-203ENST00000429416 PMVKQ15126 192 aa13.08□□□□□ -0.32
SMARCA4-203ENST00000429416 HHLA3Q9XRX5 114 aa13.08□□□□□ -0.32
SMARCA4-203ENST00000429416 PKD1L2Q7Z442 2459 aa13.08□□□□□ -0.32
SMARCA4-203ENST00000429416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-203ENST00000429416 IGKV2-29A2NJV5 120 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-203ENST00000429416 FAM231DQ6ZW35 169 aa13.08□□□□□ -0.32
SMARCA4-203ENST00000429416 A0A1B0GV72 72 aa13.07□□□□□ -0.32
SMARCA4-203ENST00000429416 NUP210LQ5VU65 1888 aa13.07□□□□□ -0.32
SMARCA4-203ENST00000429416 COL5A1P20908 1838 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-203ENST00000429416 ZNF702PQ9H963 129 aa13.07□□□□□ -0.32
SMARCA4-203ENST00000429416 PLP1P60201 277 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 C1orf229Q6ZS94 237 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 V9GYV3 84 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 A8MWP6 167 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 LEPROTO15243 131 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 F8WEM9 126 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 TSPAN13O95857 204 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 DEFB114Q30KQ6 69 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 SMIM2Q9BVW6 85 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 K7EQD1 137 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 KIAA1549Q9HCM3 1950 aa13.06□□□□□ -0.32
SMARCA4-203ENST00000429416 TMEM141Q96I45 108 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms