RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TMEM75Q8N9X5 138 aa12□□□□□ -0.49
UPK3BP1-201ENST00000428678 CIRBP-AS1Q8TBR5 109 aa12□□□□□ -0.49
UPK3BP1-201ENST00000428678 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
UPK3BP1-201ENST00000428678 A0A1W2PPV4 95 aa11.99□□□□□ -0.49
UPK3BP1-201ENST00000428678 GCGP01275 180 aa11.99□□□□□ -0.49
UPK3BP1-201ENST00000428678 PTH2Q96A98 100 aa11.99□□□□□ -0.49
UPK3BP1-201ENST00000428678 SMIM3Q9BZL3 60 aa11.99□□□□□ -0.49
UPK3BP1-201ENST00000428678 A0A087WWC5 75 aa11.98□□□□□ -0.49
UPK3BP1-201ENST00000428678 LINC00694P0DN24 101 aa11.98□□□□□ -0.49
UPK3BP1-201ENST00000428678 ACOT6Q3I5F7 207 aaPredicted RBP11.98□□□□□ -0.49
UPK3BP1-201ENST00000428678 MZT2BQ6NZ67 158 aa11.98□□□□□ -0.49
UPK3BP1-201ENST00000428678 OR2T35Q8NGX2 323 aa11.98□□□□□ -0.49
UPK3BP1-201ENST00000428678 PARLQ9H300 379 aa11.98□□□□□ -0.49
UPK3BP1-201ENST00000428678 HSPB11Q9Y547 144 aa11.98□□□□□ -0.49
UPK3BP1-201ENST00000428678 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
UPK3BP1-201ENST00000428678 RNF222A6NCQ9 220 aa11.97□□□□□ -0.49
UPK3BP1-201ENST00000428678 HMGB3O15347 200 aaKnown RBP11.97□□□□□ -0.49
UPK3BP1-201ENST00000428678 RNASE3P12724 160 aaKnown RBP11.97□□□□□ -0.49
UPK3BP1-201ENST00000428678 CYCSP99999 105 aaKnown RBP11.97□□□□□ -0.49
UPK3BP1-201ENST00000428678 CYB561D1Q8N8Q1 229 aa11.97□□□□□ -0.49
UPK3BP1-201ENST00000428678 DNAJC30Q96LL9 226 aa11.97□□□□□ -0.49
UPK3BP1-201ENST00000428678 CCDC32Q9BV29 185 aa11.97□□□□□ -0.49
UPK3BP1-201ENST00000428678 SERTM2A0A1B0GWG4 89 aa11.96□□□□□ -0.49
UPK3BP1-201ENST00000428678 IGLV2-8P01709 118 aa11.96□□□□□ -0.49
UPK3BP1-201ENST00000428678 RAB2AP61019 212 aa11.96□□□□□ -0.49
UPK3BP1-201ENST00000428678 LGALSLQ3ZCW2 172 aaPredicted RBP11.96□□□□□ -0.49
UPK3BP1-201ENST00000428678 ZFP69Q49AA0 526 aa11.96□□□□□ -0.49
UPK3BP1-201ENST00000428678 ZFP2Q6ZN57 461 aa11.96□□□□□ -0.49
UPK3BP1-201ENST00000428678 Q9UF83 564 aa11.96□□□□□ -0.49
UPK3BP1-201ENST00000428678 A8MWV9 139 aa11.95□□□□□ -0.5
UPK3BP1-201ENST00000428678 K7EQM0 130 aa11.95□□□□□ -0.5
UPK3BP1-201ENST00000428678 SEC11BP0C7V7 166 aa11.95□□□□□ -0.5
UPK3BP1-201ENST00000428678 SMUG1Q53HV7 270 aa11.95□□□□□ -0.5
UPK3BP1-201ENST00000428678 PPP1R1CQ8WVI7 109 aa11.95□□□□□ -0.5
UPK3BP1-201ENST00000428678 SAMD10Q9BYL1 202 aa11.95□□□□□ -0.5
UPK3BP1-201ENST00000428678 KLK12Q9UKR0 248 aa11.95□□□□□ -0.5
UPK3BP1-201ENST00000428678 PSG8Q9UQ74 426 aa11.95□□□□□ -0.5
UPK3BP1-201ENST00000428678 PKHD1L1Q86WI1 4243 aa11.95□□□□□ -0.5
UPK3BP1-201ENST00000428678 TCRAP04437 139 aa11.94□□□□□ -0.5
UPK3BP1-201ENST00000428678 ARL14EPLP0DKL9 152 aa11.94□□□□□ -0.5
UPK3BP1-201ENST00000428678 S100A4P26447 101 aaKnown RBP11.94□□□□□ -0.5
UPK3BP1-201ENST00000428678 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
UPK3BP1-201ENST00000428678 PRNTQ86SH4 94 aa11.94□□□□□ -0.5
UPK3BP1-201ENST00000428678 NIT1Q86X76 327 aa11.94□□□□□ -0.5
UPK3BP1-201ENST00000428678 C14orf178Q8N769 122 aaPredicted RBP11.94□□□□□ -0.5
UPK3BP1-201ENST00000428678 C5orf17Q8NAS9 161 aa11.94□□□□□ -0.5
UPK3BP1-201ENST00000428678 UBE2WQ96B02 151 aa11.94□□□□□ -0.5
UPK3BP1-201ENST00000428678 RPL12P30050 165 aaKnown RBP11.93□□□□□ -0.5
UPK3BP1-201ENST00000428678 OR10G9Q8NGN4 311 aa11.93□□□□□ -0.5
UPK3BP1-201ENST00000428678 OR10G7Q8NGN6 311 aa11.93□□□□□ -0.5
UPK3BP1-201ENST00000428678 LINC00479Q96M42 142 aa11.93□□□□□ -0.5
UPK3BP1-201ENST00000428678 JPT2Q9H910 190 aa11.93□□□□□ -0.5
UPK3BP1-201ENST00000428678 PET100P0DJ07 73 aa11.92□□□□□ -0.5
UPK3BP1-201ENST00000428678 H2BFSP57053 126 aa11.92□□□□□ -0.5
UPK3BP1-201ENST00000428678 RPL37AP61513 92 aaKnown RBP11.92□□□□□ -0.5
UPK3BP1-201ENST00000428678 FLI1Q01543 452 aaPredicted RBP11.92□□□□□ -0.5
UPK3BP1-201ENST00000428678 ENKURQ8TC29 256 aa11.92□□□□□ -0.5
UPK3BP1-201ENST00000428678 A0A087WX48 190 aa11.91□□□□□ -0.5
UPK3BP1-201ENST00000428678 MPC2O95563 127 aa11.91□□□□□ -0.5
UPK3BP1-201ENST00000428678 IGLV2-11P01706 119 aa11.91□□□□□ -0.5
UPK3BP1-201ENST00000428678 PIK3CD-AS1Q5SR53 167 aa11.91□□□□□ -0.5
UPK3BP1-201ENST00000428678 WFDC1Q9HC57 220 aa11.91□□□□□ -0.5
UPK3BP1-201ENST00000428678 ASIPP42127 132 aa11.9□□□□□ -0.5
UPK3BP1-201ENST00000428678 CDC34P49427 236 aaPredicted RBP11.9□□□□□ -0.5
UPK3BP1-201ENST00000428678 UFSP1Q6NVU6 142 aa11.9□□□□□ -0.5
UPK3BP1-201ENST00000428678 KCNIP4Q6PIL6 250 aa11.9□□□□□ -0.5
UPK3BP1-201ENST00000428678 IGKV3D-20A0A0C4DH25 116 aa11.89□□□□□ -0.51
UPK3BP1-201ENST00000428678 ELOBQ15370 118 aa11.89□□□□□ -0.51
UPK3BP1-201ENST00000428678 C14orf177Q52M58 125 aa11.89□□□□□ -0.51
UPK3BP1-201ENST00000428678 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
UPK3BP1-201ENST00000428678 RHODO00212 210 aa11.88□□□□□ -0.51
UPK3BP1-201ENST00000428678 GCHFRP30047 84 aa11.88□□□□□ -0.51
UPK3BP1-201ENST00000428678 SUMO1P63165 101 aaKnown RBP11.88□□□□□ -0.51
UPK3BP1-201ENST00000428678 SAPCD1Q5SSQ6 148 aa11.88□□□□□ -0.51
UPK3BP1-201ENST00000428678 FAM74A4Q5TZK3 123 aa11.88□□□□□ -0.51
UPK3BP1-201ENST00000428678 OR2G3Q8NGZ4 309 aa11.88□□□□□ -0.51
UPK3BP1-201ENST00000428678 EPDR1Q9UM22 224 aa11.88□□□□□ -0.51
UPK3BP1-201ENST00000428678 H3BVH4 76 aa11.87□□□□□ -0.51
UPK3BP1-201ENST00000428678 STAG3L2P0CL84 134 aa11.87□□□□□ -0.51
UPK3BP1-201ENST00000428678 STAG3L3P0CL85 134 aa11.87□□□□□ -0.51
UPK3BP1-201ENST00000428678 HNRNPA3P51991 378 aaKnown RBP11.87□□□□□ -0.51
UPK3BP1-201ENST00000428678 ATRAIDQ6UW56 229 aa11.87□□□□□ -0.51
UPK3BP1-201ENST00000428678 CHCHD7Q9BUK0 85 aa11.87□□□□□ -0.51
UPK3BP1-201ENST00000428678 C1orf43Q9BWL3 253 aa11.87□□□□□ -0.51
UPK3BP1-201ENST00000428678 IL36BQ9NZH7 164 aa11.87□□□□□ -0.51
UPK3BP1-201ENST00000428678 INMT-MINDY4F8WBC2 141 aa11.86□□□□□ -0.51
UPK3BP1-201ENST00000428678 Q0VG73 95 aa11.86□□□□□ -0.51
UPK3BP1-201ENST00000428678 RAB24Q969Q5 203 aa11.86□□□□□ -0.51
UPK3BP1-201ENST00000428678 DAZAP1Q96EP5 407 aaKnown RBP11.86□□□□□ -0.51
UPK3BP1-201ENST00000428678 TRAV34A0A0B4J273 112 aa11.85□□□□□ -0.51
UPK3BP1-201ENST00000428678 FABP5P3A8MUU1 101 aa11.85□□□□□ -0.51
UPK3BP1-201ENST00000428678 B4DEV8 164 aa11.85□□□□□ -0.51
UPK3BP1-201ENST00000428678 SSNA1O43805 119 aa11.85□□□□□ -0.51
UPK3BP1-201ENST00000428678 SUN5Q8TC36 379 aa11.85□□□□□ -0.51
UPK3BP1-201ENST00000428678 A0A087WWL8 130 aa11.84□□□□□ -0.51
UPK3BP1-201ENST00000428678 OR11H4Q8NGC9 324 aa11.84□□□□□ -0.51
UPK3BP1-201ENST00000428678 TMEM262E9PQX1 116 aa11.83□□□□□ -0.52
UPK3BP1-201ENST00000428678 CRPP02741 224 aa11.83□□□□□ -0.52
UPK3BP1-201ENST00000428678 ARMS2P0C7Q2 107 aa11.83□□□□□ -0.52
UPK3BP1-201ENST00000428678 HSD17B11Q8NBQ5 300 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms