RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 MAP1LC3B2A6NCE7 125 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 BOLA2-SMG1P6H3BVE0 249 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 INSP01308 110 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 MBP02144 154 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 C1QBP02746 253 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 SLC25A5P05141 298 aaKnown RBP3.1□□□□□ -1.91
PTPRK-209ENST00000415046 STAG3L2P0CL84 134 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 STAG3L3P0CL85 134 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 TPT1P13693 172 aaKnown RBP3.1□□□□□ -1.91
PTPRK-209ENST00000415046 GCHFRP30047 84 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 CSN1S1P47710 185 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 NKX2-5P52952 324 aaPredicted RBP3.1□□□□□ -1.91
PTPRK-209ENST00000415046 EMP1P54849 157 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 UBE2G2P60604 165 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 GNG5P63218 68 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 SERF2P84101 59 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 PDE6HQ13956 83 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 ZNF726P1Q15940 193 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 LGALSLQ3ZCW2 172 aaPredicted RBP3.1□□□□□ -1.91
PTPRK-209ENST00000415046 AMTNQ6UX39 209 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 Q8TAT8 98 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 FAM213BQ8TBF2 198 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 MAP1LC3BQ9GZQ8 125 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 EDA2RQ9HAV5 297 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 PRELID1Q9Y255 219 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 TP53TG1Q9Y2A0 90 aa3.1□□□□□ -1.91
PTPRK-209ENST00000415046 TRAV12-3A0A0B4J271 114 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 XKRY2A2RUG3 117 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 PGPA6NDG6 321 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 ZNF705GA8MUZ8 300 aaPredicted RBP3.09□□□□□ -1.91
PTPRK-209ENST00000415046 ZNF253O75346 499 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 CXorf1O96002 111 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 IFNA7P01567 189 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 PRM2P04554 102 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 RBMY1A1P0DJD3 496 aaKnown RBP3.09□□□□□ -1.91
PTPRK-209ENST00000415046 RBMY1CP0DJD4 496 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 CT45A10P0DMU9 189 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 HTN1P15515 57 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 TSPOP30536 169 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 RNASE4P34096 147 aaKnown RBP3.09□□□□□ -1.91
PTPRK-209ENST00000415046 LEPP41159 167 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 EIF5AP63241 154 aaKnown RBP3.09□□□□□ -1.91
PTPRK-209ENST00000415046 RBMY1FQ15415 496 aaKnown RBP3.09□□□□□ -1.91
PTPRK-209ENST00000415046 LINC01620Q4KN68 170 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 TMEM78Q5T7P6 136 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 GOLT1AQ6ZVE7 132 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 ZNF767PQ75MW2 155 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 C9orf62Q8N4C0 152 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 Q8NAQ8 132 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 CSNK1G2-AS1Q8NCQ2 148 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 MUC7Q8TAX7 377 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 CMTM2Q8TAZ6 248 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 IGF2BP2-AS1Q96M15 143 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 LYSTQ99698 3801 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 OTORQ9NRC9 128 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 CELA1Q9UNI1 258 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 GOLT1BQ9Y3E0 138 aa3.09□□□□□ -1.91
PTPRK-209ENST00000415046 STARD9Q9P2P6 4700 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 TRAV8-1A0A0A6YYK1 113 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 A8MTW9 85 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 ZNF705EA8MWA4 302 aaPredicted RBP3.08□□□□□ -1.92
PTPRK-209ENST00000415046 GGTLC3B5MD39 225 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 CRXO43186 299 aaPredicted RBP3.08□□□□□ -1.92
PTPRK-209ENST00000415046 HBE1P02100 147 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 GPX1P07203 203 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 SEC11BP0C7V7 166 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 MIFP14174 115 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 CDKN1BP46527 198 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 PPT1P50897 306 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 BTN1A1Q13410 526 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 HIGD2BQ4VC39 106 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 FAM74A1Q5RGS3 127 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 PRR9Q5T870 116 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 C1orf158Q8N1D5 194 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 STOML3Q8TAV4 291 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 SFT2D1Q8WV19 159 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 LINC01587Q99440 93 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 AGPAT4-IT1Q9H0P7 198 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 C11orf68Q9H3H3 251 aaKnown RBP3.08□□□□□ -1.92
PTPRK-209ENST00000415046 TMEM167BQ9NRX6 74 aa3.08□□□□□ -1.92
PTPRK-209ENST00000415046 YTHDF2Q9Y5A9 579 aaKnown RBP3.08□□□□□ -1.92
PTPRK-209ENST00000415046 C7orf71A4D174 169 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 UMAD1C9J7I0 102 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 F6UZH7 168 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 HTN3P15516 51 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 ATP5G3P48201 142 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 ZNF138P52744 262 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 RRN3P1Q2M238 152 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 MUC21Q5SSG8 566 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 FAM222AQ5U5X8 452 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 ALKAL2Q6UX46 152 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 ZNF705AQ6ZN79 300 aaPredicted RBP3.07□□□□□ -1.92
PTPRK-209ENST00000415046 Q6ZQT7 251 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 SLC51BQ86UW2 128 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 LYPD1Q8N2G4 141 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 C5orf17Q8NAS9 161 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 C11orf45Q8TAV5 145 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 RXFP4Q8TDU9 374 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 LINC00477Q96M19 166 aa3.07□□□□□ -1.92
PTPRK-209ENST00000415046 NIPSNAP3BQ9BS92 247 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms