RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 PHLDA1Q8WV24 401 aaPredicted RBP12.79□□□□□ -0.36
SYNC-202ENST00000409190 UTP20O75691 2785 aaKnown RBP12.79□□□□□ -0.36
SYNC-202ENST00000409190 OOSP1A8MZH6 123 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 RBAKDNA6NC62 111 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 F8VRH5 84 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 H7C1H1 209 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 ASIPP42127 132 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 Q6ZS46 218 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 C5orf56Q8N8D9 126 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 SMPXQ9UHP9 88 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 FLNCQ14315 2725 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 ZANQ9Y493 2812 aa12.78□□□□□ -0.36
SYNC-202ENST00000409190 ZNF815PA8K554 130 aa12.77□□□□□ -0.36
SYNC-202ENST00000409190 DUSP14O95147 198 aaKnown RBP12.77□□□□□ -0.36
SYNC-202ENST00000409190 HLA-DRB4P13762 266 aa12.77□□□□□ -0.36
SYNC-202ENST00000409190 SLC25A16P16260 332 aa12.77□□□□□ -0.36
SYNC-202ENST00000409190 FBXL19-AS1Q494R0 122 aa12.77□□□□□ -0.36
SYNC-202ENST00000409190 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.36
SYNC-202ENST00000409190 HIGD1BQ9P298 99 aa12.77□□□□□ -0.36
SYNC-202ENST00000409190 HLA-DRB4X5D2U9 266 aa12.77□□□□□ -0.36
SYNC-202ENST00000409190 C9orf47Q6ZRZ4 202 aa12.77□□□□□ -0.37
SYNC-202ENST00000409190 TRBV7-1A0A0A6YYK4 115 aa12.77□□□□□ -0.37
SYNC-202ENST00000409190 PRSS29PA6NIE9 313 aa12.77□□□□□ -0.37
SYNC-202ENST00000409190 BLCAPP62952 87 aa12.77□□□□□ -0.37
SYNC-202ENST00000409190 TMEM190Q8WZ59 177 aa12.77□□□□□ -0.37
SYNC-202ENST00000409190 PLEKHB2Q96CS7 222 aa12.77□□□□□ -0.37
SYNC-202ENST00000409190 RPL39P62891 51 aaKnown RBP12.76□□□□□ -0.37
SYNC-202ENST00000409190 C1orf122Q6ZSJ8 110 aa12.76□□□□□ -0.37
SYNC-202ENST00000409190 ZFAND2AQ8N6M9 145 aa12.76□□□□□ -0.37
SYNC-202ENST00000409190 MRPL16Q9NX20 251 aaKnown RBP12.76□□□□□ -0.37
SYNC-202ENST00000409190 PGPEP1Q9NXJ5 209 aa12.76□□□□□ -0.37
SYNC-202ENST00000409190 PIEZO1Q92508 2521 aa12.76□□□□□ -0.37
SYNC-202ENST00000409190 PLNP26678 52 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 LMO4P61968 165 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 TMEM95Q3KNT9 176 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 ZNF418Q8TF45 676 aaPredicted RBP12.75□□□□□ -0.37
SYNC-202ENST00000409190 TM2D2Q9BX73 214 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 ZFYVE26Q68DK2 2539 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 IGHV3-64A0A075B6Q5 118 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 A0A1B0GWB2 263 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 HTN1P15515 57 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 AZU1P20160 251 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 SRSF2Q01130 221 aaKnown RBP12.75□□□□□ -0.37
SYNC-202ENST00000409190 KLRB1Q12918 225 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 TRAV21A0A0B4J279 112 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 MYMXA0A1B0GTQ4 84 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 FOXI2Q6ZQN5 318 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 GPHB5Q86YW7 130 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 ZNF256Q9Y2P7 627 aaPredicted RBP12.75□□□□□ -0.37
SYNC-202ENST00000409190 NACAE9PAV3 2078 aa12.75□□□□□ -0.37
SYNC-202ENST00000409190 SAMD13Q5VXD3 122 aa12.74□□□□□ -0.37
SYNC-202ENST00000409190 BAALCQ8WXS3 180 aa12.74□□□□□ -0.37
SYNC-202ENST00000409190 DPH3P1Q9H4G8 78 aa12.74□□□□□ -0.37
SYNC-202ENST00000409190 MUC4Q99102 2169 aa12.74□□□□□ -0.37
SYNC-202ENST00000409190 TRAV12-3A0A0B4J271 114 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 E9PLD3 99 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 IGHV4-38-2P0DP08 117 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 TRAV12-2A0A075B6T6 113 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 LINC01549A6NIU2 74 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 C9orf139Q6ZV77 190 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 PRSS47A8MTI9 375 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 H3BUX3 64 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 C19orf84I3L1E1 186 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 LGALS1P09382 135 aaKnown RBP12.73□□□□□ -0.37
SYNC-202ENST00000409190 GAGE13Q4V321 117 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 TMEM170BQ5T4T1 132 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 RHPN1-AS1Q9BWJ2 59 aa12.73□□□□□ -0.37
SYNC-202ENST00000409190 ORMDL2Q53FV1 153 aa12.72□□□□□ -0.37
SYNC-202ENST00000409190 TP53TG1Q9Y2A0 90 aa12.72□□□□□ -0.37
SYNC-202ENST00000409190 WNK1Q9H4A3 2382 aa12.72□□□□□ -0.37
SYNC-202ENST00000409190 OPRPNQ99935 248 aaPredicted RBP12.72□□□□□ -0.37
SYNC-202ENST00000409190 LINC01546A6NGU7 62 aa12.72□□□□□ -0.37
SYNC-202ENST00000409190 H7C2G1 150 aa12.72□□□□□ -0.37
SYNC-202ENST00000409190 CD7P09564 240 aa12.72□□□□□ -0.37
SYNC-202ENST00000409190 PSMB2P49721 201 aa12.72□□□□□ -0.37
SYNC-202ENST00000409190 MOB4Q9Y3A3 225 aa12.72□□□□□ -0.37
SYNC-202ENST00000409190 ITPR1Q14643 2758 aa12.71□□□□□ -0.37
SYNC-202ENST00000409190 HOXA3O43365 443 aaPredicted RBP12.71□□□□□ -0.37
SYNC-202ENST00000409190 PTH2Q96A98 100 aa12.71□□□□□ -0.37
SYNC-202ENST00000409190 MRAP2Q96G30 205 aa12.71□□□□□ -0.37
SYNC-202ENST00000409190 LINC00477Q96M19 166 aa12.71□□□□□ -0.37
SYNC-202ENST00000409190 RRN3P1Q2M238 152 aa12.71□□□□□ -0.38
SYNC-202ENST00000409190 SPAG8Q99932 426 aaPredicted RBP12.71□□□□□ -0.38
SYNC-202ENST00000409190 PIFOQ8TCI5 191 aa12.7□□□□□ -0.38
SYNC-202ENST00000409190 SPANXB1Q9NS25 103 aaPredicted RBP12.7□□□□□ -0.38
SYNC-202ENST00000409190 ZFP2Q6ZN57 461 aa12.7□□□□□ -0.38
SYNC-202ENST00000409190 NEXN-AS1Q8NBZ9 246 aa12.7□□□□□ -0.38
SYNC-202ENST00000409190 ZNF688P0C7X2 276 aa12.7□□□□□ -0.38
SYNC-202ENST00000409190 TOMM6Q96B49 74 aa12.7□□□□□ -0.38
SYNC-202ENST00000409190 TRBV7-3A0A075B6L6 115 aa12.69□□□□□ -0.38
SYNC-202ENST00000409190 C11orf86A6NJI1 115 aa12.69□□□□□ -0.38
SYNC-202ENST00000409190 RNASE3P12724 160 aaKnown RBP12.69□□□□□ -0.38
SYNC-202ENST00000409190 PKD1L2Q7Z442 2459 aa12.69□□□□□ -0.38
SYNC-202ENST00000409190 SONP18583 2426 aaKnown RBP12.69□□□□□ -0.38
SYNC-202ENST00000409190 ITLN2Q8WWU7 325 aaPredicted RBP12.69□□□□□ -0.38
SYNC-202ENST00000409190 DUX5Q96PT3 197 aa12.69□□□□□ -0.38
SYNC-202ENST00000409190 U3KQE9 123 aa12.69□□□□□ -0.38
SYNC-202ENST00000409190 GAGE12HA6NDE8 117 aa12.69□□□□□ -0.38
SYNC-202ENST00000409190 FAM159AQ6UWV7 190 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms