RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 EDA2RQ9HAV5 297 aa16.84■□□□□ 0.29
TSPAN4-203ENST00000397397 IGLC6P0CF74 106 aa16.83■□□□□ 0.28
TSPAN4-203ENST00000397397 Q6ZTI0 123 aa16.83■□□□□ 0.28
TSPAN4-203ENST00000397397 TSKUQ8WUA8 353 aa16.83■□□□□ 0.28
TSPAN4-203ENST00000397397 ANAPC16Q96DE5 110 aa16.83■□□□□ 0.28
TSPAN4-203ENST00000397397 SCRT2Q9NQ03 307 aa16.83■□□□□ 0.28
TSPAN4-203ENST00000397397 PHLDA3Q9Y5J5 127 aa16.83■□□□□ 0.28
TSPAN4-203ENST00000397397 A0A1W2PPQ1 181 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 GAGE12BA1L429 117 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 SNAI2O43623 268 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 GAGE7O76087 117 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 GAGE12FP0CL80 117 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 GAGE12GP0CL81 117 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 GAGE12IP0CL82 117 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 DEFB130BP0DP73 79 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 DEFB130AP0DP74 79 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 LGALS9BQ3B8N2 356 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 C11orf45Q8TAV5 145 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 MUC4Q99102 2169 aa16.82■□□□□ 0.28
TSPAN4-203ENST00000397397 OR5AL1P0C617 328 aa16.81■□□□□ 0.28
TSPAN4-203ENST00000397397 DAD1P61803 113 aa16.81■□□□□ 0.28
TSPAN4-203ENST00000397397 CLRN3Q8NCR9 226 aa16.81■□□□□ 0.28
TSPAN4-203ENST00000397397 GTSF1Q8WW33 167 aa16.81■□□□□ 0.28
TSPAN4-203ENST00000397397 SSBP4Q9BWG4 385 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-203ENST00000397397 MUC21A0A0G2JKD1 596 aa16.8■□□□□ 0.28
TSPAN4-203ENST00000397397 MUC21A0A140T8X8 626 aa16.8■□□□□ 0.28
TSPAN4-203ENST00000397397 ZNF876PQ49A33 203 aa16.8■□□□□ 0.28
TSPAN4-203ENST00000397397 LYZL1Q6UWQ5 148 aa16.8■□□□□ 0.28
TSPAN4-203ENST00000397397 SVBPQ8N300 66 aa16.8■□□□□ 0.28
TSPAN4-203ENST00000397397 NANOS2P60321 138 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 LINC00612Q8N6U2 182 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 SYT8Q8NBV8 401 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 OR10AG1Q8NH19 301 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 RASL10AQ92737 203 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 PTH2Q96A98 100 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 GFRA4Q9GZZ7 299 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 F2Z2F3 143 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 M0R381 172 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 SSTP61278 116 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 C12orf74Q32Q52 190 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 ZFP82Q8N141 532 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 PGLYRP4Q96LB8 373 aa16.79■□□□□ 0.28
TSPAN4-203ENST00000397397 TRGV2A0A075B6R0 118 aa16.78■□□□□ 0.28
TSPAN4-203ENST00000397397 FAM231BA6NCW3 169 aa16.78■□□□□ 0.28
TSPAN4-203ENST00000397397 SPANXN1Q5VSR9 72 aa16.78■□□□□ 0.28
TSPAN4-203ENST00000397397 DMRTA1Q5VZB9 504 aa16.78■□□□□ 0.28
TSPAN4-203ENST00000397397 C7orf77A4D0Y5 90 aa16.77■□□□□ 0.27
TSPAN4-203ENST00000397397 HIGD1CA8MV81 97 aa16.77■□□□□ 0.27
TSPAN4-203ENST00000397397 SNAPINO95295 136 aa16.77■□□□□ 0.27
TSPAN4-203ENST00000397397 CTRLP40313 264 aa16.77■□□□□ 0.27
TSPAN4-203ENST00000397397 RHEBQ15382 184 aa16.77■□□□□ 0.27
TSPAN4-203ENST00000397397 CTDSP1Q9GZU7 261 aa16.77■□□□□ 0.27
TSPAN4-203ENST00000397397 SMIM27A0A1W2PRY6 76 aa16.76■□□□□ 0.27
TSPAN4-203ENST00000397397 FOXA3P55318 350 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-203ENST00000397397 CACNG7P62955 275 aa16.76■□□□□ 0.27
TSPAN4-203ENST00000397397 RPS10P5Q9NQ39 176 aa16.76■□□□□ 0.27
TSPAN4-203ENST00000397397 NAT8BQ9UHF3 227 aa16.75■□□□□ 0.27
TSPAN4-203ENST00000397397 NXPH4O95158 308 aa16.74■□□□□ 0.27
TSPAN4-203ENST00000397397 PIK3CD-AS1Q5SR53 167 aa16.74■□□□□ 0.27
TSPAN4-203ENST00000397397 Q6ZTC4 211 aa16.74■□□□□ 0.27
TSPAN4-203ENST00000397397 NUP35Q8NFH5 326 aa16.74■□□□□ 0.27
TSPAN4-203ENST00000397397 NDUFAF3Q9BU61 184 aa16.74■□□□□ 0.27
TSPAN4-203ENST00000397397 WDR73Q6P4I2 378 aa16.73■□□□□ 0.27
TSPAN4-203ENST00000397397 BORCS7Q96B45 105 aa16.73■□□□□ 0.27
TSPAN4-203ENST00000397397 STAB2Q8WWQ8 2551 aa16.72■□□□□ 0.27
TSPAN4-203ENST00000397397 C18orf15Q96N68 181 aa16.72■□□□□ 0.27
TSPAN4-203ENST00000397397 A0A087WWC5 75 aa16.71■□□□□ 0.27
TSPAN4-203ENST00000397397 IGHV3-53P01767 116 aa16.71■□□□□ 0.27
TSPAN4-203ENST00000397397 NTF3P20783 257 aa16.71■□□□□ 0.27
TSPAN4-203ENST00000397397 OR4C5Q8NGB2 326 aa16.71■□□□□ 0.27
TSPAN4-203ENST00000397397 WWC2-AS2Q96NR7 200 aa16.71■□□□□ 0.27
TSPAN4-203ENST00000397397 CNFNQ9BYD5 112 aa16.71■□□□□ 0.27
TSPAN4-203ENST00000397397 JPT2Q9H910 190 aa16.71■□□□□ 0.27
TSPAN4-203ENST00000397397 IGHV4-4A0A075B6R2 117 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 TRAV4A0A0B4J268 109 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 A8MWV9 139 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 RS1O15537 224 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 ATP5G1P05496 136 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 HTN3P15516 51 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 TWIST1Q15672 202 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 POM121L12Q8N7R1 296 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 MSRB1Q9NZV6 116 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 A0A1B0GUT8 65 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 FAM3BP58499 235 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 CFAP126Q5VTH2 177 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 TMEM242Q9NWH2 141 aa16.7■□□□□ 0.26
TSPAN4-203ENST00000397397 ZNF479Q96JC4 524 aa16.69■□□□□ 0.26
TSPAN4-203ENST00000397397 IMMP2LQ96T52 175 aa16.69■□□□□ 0.26
TSPAN4-203ENST00000397397 ATRAIDQ6UW56 229 aa16.68■□□□□ 0.26
TSPAN4-203ENST00000397397 RIGQ13278 110 aa16.67■□□□□ 0.26
TSPAN4-203ENST00000397397 AP1S3Q96PC3 154 aa16.67■□□□□ 0.26
TSPAN4-203ENST00000397397 SAMD10Q9BYL1 202 aa16.67■□□□□ 0.26
TSPAN4-203ENST00000397397 NACAE9PAV3 2078 aa16.66■□□□□ 0.26
TSPAN4-203ENST00000397397 A0A087WWL8 130 aa16.66■□□□□ 0.26
TSPAN4-203ENST00000397397 TRAV10A0A0B4J240 114 aa16.66■□□□□ 0.26
TSPAN4-203ENST00000397397 F5H768 121 aa16.66■□□□□ 0.26
TSPAN4-203ENST00000397397 TRGC1P0CF51 173 aa16.66■□□□□ 0.26
TSPAN4-203ENST00000397397 KCNIP4Q6PIL6 250 aa16.66■□□□□ 0.26
TSPAN4-203ENST00000397397 PHLDA1Q8WV24 401 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-203ENST00000397397 DEFB131BA0A096LNP1 70 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms