RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ZNF705BP0CI00 300 aaPredicted RBP12.87□□□□□ -0.35
TNFSF13-205ENST00000396545 IQCJQ1A5X6 159 aa12.87□□□□□ -0.35
TNFSF13-205ENST00000396545 APRG1Q8IVJ8 170 aa12.87□□□□□ -0.35
TNFSF13-205ENST00000396545 ZFAND2AQ8N6M9 145 aa12.87□□□□□ -0.35
TNFSF13-205ENST00000396545 OR8A1Q8NGG7 326 aa12.87□□□□□ -0.35
TNFSF13-205ENST00000396545 TPPP3Q9BW30 176 aa12.87□□□□□ -0.35
TNFSF13-205ENST00000396545 C11orf21Q9P2W6 132 aa12.87□□□□□ -0.35
TNFSF13-205ENST00000396545 OR2K2Q8NGT1 345 aa12.86□□□□□ -0.35
TNFSF13-205ENST00000396545 BIRC6Q9NR09 4857 aa12.86□□□□□ -0.35
TNFSF13-205ENST00000396545 PCP4L1A6NKN8 68 aa12.86□□□□□ -0.35
TNFSF13-205ENST00000396545 GPX1P07203 203 aa12.86□□□□□ -0.35
TNFSF13-205ENST00000396545 PRR9Q5T870 116 aa12.86□□□□□ -0.35
TNFSF13-205ENST00000396545 WFDC3Q8IUB2 231 aa12.86□□□□□ -0.35
TNFSF13-205ENST00000396545 OR4C46A6NHA9 309 aa12.85□□□□□ -0.35
TNFSF13-205ENST00000396545 ZNF324O75467 553 aaPredicted RBP12.85□□□□□ -0.35
TNFSF13-205ENST00000396545 TMEM61Q8N0U2 210 aa12.85□□□□□ -0.35
TNFSF13-205ENST00000396545 SAMD10Q9BYL1 202 aa12.85□□□□□ -0.35
TNFSF13-205ENST00000396545 DEFB1P60022 68 aa12.84□□□□□ -0.35
TNFSF13-205ENST00000396545 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
TNFSF13-205ENST00000396545 Q6ZWC4 215 aa12.84□□□□□ -0.35
TNFSF13-205ENST00000396545 GSN-AS1Q9NRJ2 163 aa12.84□□□□□ -0.35
TNFSF13-205ENST00000396545 F6UB75 175 aa12.83□□□□□ -0.36
TNFSF13-205ENST00000396545 DUSP14O95147 198 aaKnown RBP12.83□□□□□ -0.36
TNFSF13-205ENST00000396545 TFPI2P48307 235 aa12.83□□□□□ -0.36
TNFSF13-205ENST00000396545 CMC4P56277 68 aaPredicted RBP12.83□□□□□ -0.36
TNFSF13-205ENST00000396545 CD300EQ496F6 205 aaPredicted RBP12.83□□□□□ -0.36
TNFSF13-205ENST00000396545 URB1-AS1Q96HZ7 61 aa12.83□□□□□ -0.36
TNFSF13-205ENST00000396545 ODF3Q96PU9 254 aa12.83□□□□□ -0.36
TNFSF13-205ENST00000396545 SELENOKQ9Y6D0 94 aa12.83□□□□□ -0.36
TNFSF13-205ENST00000396545 ZNF688P0C7X2 276 aa12.82□□□□□ -0.36
TNFSF13-205ENST00000396545 PSMG4Q5JS54 123 aa12.82□□□□□ -0.36
TNFSF13-205ENST00000396545 EBLN2Q6P2I7 272 aa12.82□□□□□ -0.36
TNFSF13-205ENST00000396545 FOXI2Q6ZQN5 318 aa12.82□□□□□ -0.36
TNFSF13-205ENST00000396545 RETNQ9HD89 108 aa12.82□□□□□ -0.36
TNFSF13-205ENST00000396545 HYDINQ4G0P3 5121 aa12.82□□□□□ -0.36
TNFSF13-205ENST00000396545 TRAV21A0A0B4J279 112 aa12.81□□□□□ -0.36
TNFSF13-205ENST00000396545 AMTP48728 403 aa12.81□□□□□ -0.36
TNFSF13-205ENST00000396545 FAM104BQ5XKR9 115 aa12.81□□□□□ -0.36
TNFSF13-205ENST00000396545 SNAI2O43623 268 aa12.81□□□□□ -0.36
TNFSF13-205ENST00000396545 NTF3P20783 257 aa12.81□□□□□ -0.36
TNFSF13-205ENST00000396545 Q6ZQT7 251 aa12.81□□□□□ -0.36
TNFSF13-205ENST00000396545 CHCHD1Q96BP2 118 aaKnown RBP12.81□□□□□ -0.36
TNFSF13-205ENST00000396545 TMEM191AQ9H0A3 160 aa12.81□□□□□ -0.36
TNFSF13-205ENST00000396545 A0A0J9YX75 114 aa12.8□□□□□ -0.36
TNFSF13-205ENST00000396545 OR5AL1P0C617 328 aa12.8□□□□□ -0.36
TNFSF13-205ENST00000396545 TWIST1Q15672 202 aa12.8□□□□□ -0.36
TNFSF13-205ENST00000396545 NIT1Q86X76 327 aa12.8□□□□□ -0.36
TNFSF13-205ENST00000396545 KLLNB2CW77 178 aa12.79□□□□□ -0.36
TNFSF13-205ENST00000396545 HSBP1O75506 76 aa12.79□□□□□ -0.36
TNFSF13-205ENST00000396545 CD7P09564 240 aa12.79□□□□□ -0.36
TNFSF13-205ENST00000396545 PMCHP20382 165 aa12.79□□□□□ -0.36
TNFSF13-205ENST00000396545 AMN1Q8IY45 258 aa12.79□□□□□ -0.36
TNFSF13-205ENST00000396545 FAM110AQ9BQ89 295 aa12.79□□□□□ -0.36
TNFSF13-205ENST00000396545 IGHV4-4A0A075B6R2 117 aa12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 MUC21A0A0G2JKD1 596 aa12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 MUC21A0A140T8X8 626 aa12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 RBMY1BA6NDE4 496 aaKnown RBP12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 RBMY1EA6NEQ0 496 aaKnown RBP12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 RBMY1DP0C7P1 496 aaKnown RBP12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 MUC21Q5SSG8 566 aa12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 RNASEKQ6P5S7 137 aaKnown RBP12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 DEFB125Q8N687 156 aa12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 WFDC10AQ9H1F0 79 aa12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 PLECQ15149 4684 aaKnown RBP12.78□□□□□ -0.36
TNFSF13-205ENST00000396545 MRPL51Q4U2R6 128 aaKnown RBP12.77□□□□□ -0.36
TNFSF13-205ENST00000396545 FAM19A2Q8N3H0 131 aa12.77□□□□□ -0.36
TNFSF13-205ENST00000396545 IL17DQ8TAD2 202 aa12.77□□□□□ -0.36
TNFSF13-205ENST00000396545 MSRB1Q9NZV6 116 aa12.77□□□□□ -0.36
TNFSF13-205ENST00000396545 NAGKQ9UJ70 344 aa12.77□□□□□ -0.36
TNFSF13-205ENST00000396545 MED14OSP0DP75 135 aa12.77□□□□□ -0.37
TNFSF13-205ENST00000396545 TSPOP30536 169 aa12.77□□□□□ -0.37
TNFSF13-205ENST00000396545 LEPP41159 167 aa12.77□□□□□ -0.37
TNFSF13-205ENST00000396545 DEFB131AP59861 70 aa12.77□□□□□ -0.37
TNFSF13-205ENST00000396545 CACNG7P62955 275 aa12.77□□□□□ -0.37
TNFSF13-205ENST00000396545 RNF185Q96GF1 192 aa12.77□□□□□ -0.37
TNFSF13-205ENST00000396545 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
TNFSF13-205ENST00000396545 J3KRW8 73 aa12.76□□□□□ -0.37
TNFSF13-205ENST00000396545 LINC00614P0C842 121 aa12.76□□□□□ -0.37
TNFSF13-205ENST00000396545 RNASE4P34096 147 aaKnown RBP12.76□□□□□ -0.37
TNFSF13-205ENST00000396545 SSTP61278 116 aa12.76□□□□□ -0.37
TNFSF13-205ENST00000396545 ORMDL3Q8N138 153 aa12.76□□□□□ -0.37
TNFSF13-205ENST00000396545 CLUHP3Q96NS8 147 aa12.76□□□□□ -0.37
TNFSF13-205ENST00000396545 A8MTW9 85 aa12.75□□□□□ -0.37
TNFSF13-205ENST00000396545 D6R8Y8 96 aa12.75□□□□□ -0.37
TNFSF13-205ENST00000396545 SCGB1D1O95968 90 aa12.75□□□□□ -0.37
TNFSF13-205ENST00000396545 HLA-DRB4P13762 266 aa12.75□□□□□ -0.37
TNFSF13-205ENST00000396545 KIR3DS1Q14943 382 aa12.75□□□□□ -0.37
TNFSF13-205ENST00000396545 ANXA2RQ3ZCQ2 193 aa12.75□□□□□ -0.37
TNFSF13-205ENST00000396545 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
TNFSF13-205ENST00000396545 HLA-DRB4X5D2U9 266 aa12.75□□□□□ -0.37
TNFSF13-205ENST00000396545 M0R2Z0 102 aa12.74□□□□□ -0.37
TNFSF13-205ENST00000396545 RAB4AP20338 218 aa12.74□□□□□ -0.37
TNFSF13-205ENST00000396545 Q8N976 141 aa12.74□□□□□ -0.37
TNFSF13-205ENST00000396545 OR10AG1Q8NH19 301 aa12.74□□□□□ -0.37
TNFSF13-205ENST00000396545 PKIAP61925 76 aa12.73□□□□□ -0.37
TNFSF13-205ENST00000396545 PRELID3AQ96N28 172 aa12.73□□□□□ -0.37
TNFSF13-205ENST00000396545 SCRT2Q9NQ03 307 aa12.73□□□□□ -0.37
TNFSF13-205ENST00000396545 ALMS1Q8TCU4 4167 aa12.73□□□□□ -0.37
TNFSF13-205ENST00000396545 IGHV1-24A0A0C4DH33 117 aa12.73□□□□□ -0.37
TNFSF13-205ENST00000396545 H3BVH4 76 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms