RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PFDN1O60925 122 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 IGHV3-30P01768 117 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 IGHV3-33P01772 117 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 IGHV3-30-3P0DP02 117 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 IGHV3-30-5P0DP03 117 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 FFAR4Q5NUL3 377 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 CFAP126Q5VTH2 177 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 SERTM2A0A1B0GWG4 89 aa11.6□□□□□ -0.55
EXOSC3-202ENST00000396521 SEC11BP0C7V7 166 aa11.6□□□□□ -0.55
EXOSC3-202ENST00000396521 RPL7L1Q6DKI1 246 aaKnown RBP11.6□□□□□ -0.55
EXOSC3-202ENST00000396521 PQLC2Q6ZP29 291 aa11.6□□□□□ -0.55
EXOSC3-202ENST00000396521 OR11H4Q8NGC9 324 aa11.6□□□□□ -0.55
EXOSC3-202ENST00000396521 NDFIP1Q9BT67 221 aa11.6□□□□□ -0.55
EXOSC3-202ENST00000396521 A0A087WWC5 75 aa11.59□□□□□ -0.55
EXOSC3-202ENST00000396521 A0A0D9SG52 128 aa11.59□□□□□ -0.55
EXOSC3-202ENST00000396521 OXTP01178 125 aa11.59□□□□□ -0.55
EXOSC3-202ENST00000396521 ZFP69Q49AA0 526 aa11.59□□□□□ -0.55
EXOSC3-202ENST00000396521 GOLT1AQ6ZVE7 132 aa11.59□□□□□ -0.55
EXOSC3-202ENST00000396521 KCNRGQ8N5I3 272 aa11.59□□□□□ -0.55
EXOSC3-202ENST00000396521 RMI2Q96E14 147 aa11.59□□□□□ -0.55
EXOSC3-202ENST00000396521 BCL2L11O43521 198 aa11.58□□□□□ -0.56
EXOSC3-202ENST00000396521 ACOT6Q3I5F7 207 aaPredicted RBP11.58□□□□□ -0.56
EXOSC3-202ENST00000396521 Q8N976 141 aa11.58□□□□□ -0.56
EXOSC3-202ENST00000396521 PSMG3Q9BT73 122 aaPredicted RBP11.58□□□□□ -0.56
EXOSC3-202ENST00000396521 GGTLC3B5MD39 225 aa11.57□□□□□ -0.56
EXOSC3-202ENST00000396521 ATP6V0CP27449 155 aa11.57□□□□□ -0.56
EXOSC3-202ENST00000396521 PIK3CD-AS1Q5SR53 167 aa11.57□□□□□ -0.56
EXOSC3-202ENST00000396521 K7EQM0 130 aa11.56□□□□□ -0.56
EXOSC3-202ENST00000396521 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
EXOSC3-202ENST00000396521 TVP23CQ96ET8 276 aa11.56□□□□□ -0.56
EXOSC3-202ENST00000396521 ZNF471Q9BX82 626 aaPredicted RBP11.56□□□□□ -0.56
EXOSC3-202ENST00000396521 RPH3ALQ9UNE2 315 aa11.56□□□□□ -0.56
EXOSC3-202ENST00000396521 A0A1W2PPV4 95 aa11.55□□□□□ -0.56
EXOSC3-202ENST00000396521 F6UZH7 168 aa11.55□□□□□ -0.56
EXOSC3-202ENST00000396521 RAB2AP61019 212 aa11.55□□□□□ -0.56
EXOSC3-202ENST00000396521 EIF5AP63241 154 aaKnown RBP11.55□□□□□ -0.56
EXOSC3-202ENST00000396521 TMUB2Q71RG4 321 aa11.55□□□□□ -0.56
EXOSC3-202ENST00000396521 OR2G3Q8NGZ4 309 aa11.55□□□□□ -0.56
EXOSC3-202ENST00000396521 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
EXOSC3-202ENST00000396521 CHAC1Q9BUX1 264 aa11.55□□□□□ -0.56
EXOSC3-202ENST00000396521 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
EXOSC3-202ENST00000396521 A8MWV9 139 aa11.54□□□□□ -0.56
EXOSC3-202ENST00000396521 MBP02144 154 aa11.54□□□□□ -0.56
EXOSC3-202ENST00000396521 FGF8P55075 233 aaPredicted RBP11.54□□□□□ -0.56
EXOSC3-202ENST00000396521 WFDC2Q14508 124 aa11.54□□□□□ -0.56
EXOSC3-202ENST00000396521 DNAH8Q96JB1 4490 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 RBFOX3A6NFN3 312 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 SERF2P84101 59 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 ZNF506Q5JVG8 444 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 AKR1C8PQ5T2L2 129 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 DPPA3Q6W0C5 159 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 SCXQ7RTU7 201 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 OR10G9Q8NGN4 311 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 OR10G7Q8NGN6 311 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 CYTL1Q9NRR1 136 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 URGCP-MRPS24S4R325 110 aa11.53□□□□□ -0.56
EXOSC3-202ENST00000396521 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.52□□□□□ -0.57
EXOSC3-202ENST00000396521 IGHV3-73A0A0B4J1V6 119 aa11.52□□□□□ -0.57
EXOSC3-202ENST00000396521 TPT1P13693 172 aaKnown RBP11.52□□□□□ -0.57
EXOSC3-202ENST00000396521 CDC34P49427 236 aaPredicted RBP11.52□□□□□ -0.57
EXOSC3-202ENST00000396521 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.57
EXOSC3-202ENST00000396521 C5orf17Q8NAS9 161 aa11.52□□□□□ -0.57
EXOSC3-202ENST00000396521 PGPEP1LA6NFU8 196 aa11.51□□□□□ -0.57
EXOSC3-202ENST00000396521 LECT2O14960 151 aa11.51□□□□□ -0.57
EXOSC3-202ENST00000396521 GCGP01275 180 aa11.51□□□□□ -0.57
EXOSC3-202ENST00000396521 ELOBQ15370 118 aa11.51□□□□□ -0.57
EXOSC3-202ENST00000396521 SMUG1Q53HV7 270 aa11.51□□□□□ -0.57
EXOSC3-202ENST00000396521 DAZ4Q86SG3 579 aaKnown RBP11.51□□□□□ -0.57
EXOSC3-202ENST00000396521 BAALCQ8WXS3 180 aa11.51□□□□□ -0.57
EXOSC3-202ENST00000396521 DAZ3Q9NR90 486 aaKnown RBP11.51□□□□□ -0.57
EXOSC3-202ENST00000396521 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
EXOSC3-202ENST00000396521 SAPCD1Q5SSQ6 148 aa11.5□□□□□ -0.57
EXOSC3-202ENST00000396521 CHCHD7Q9BUK0 85 aa11.5□□□□□ -0.57
EXOSC3-202ENST00000396521 IGLV2-8P01709 118 aa11.49□□□□□ -0.57
EXOSC3-202ENST00000396521 TCRAP04437 139 aa11.49□□□□□ -0.57
EXOSC3-202ENST00000396521 RNASE3P12724 160 aaKnown RBP11.49□□□□□ -0.57
EXOSC3-202ENST00000396521 LGALSLQ3ZCW2 172 aaPredicted RBP11.49□□□□□ -0.57
EXOSC3-202ENST00000396521 C9orf62Q8N4C0 152 aa11.49□□□□□ -0.57
EXOSC3-202ENST00000396521 ACTR3CQ9C0K3 210 aaPredicted RBP11.49□□□□□ -0.57
EXOSC3-202ENST00000396521 PARLQ9H300 379 aa11.49□□□□□ -0.57
EXOSC3-202ENST00000396521 C11orf21Q9P2W6 132 aa11.49□□□□□ -0.57
EXOSC3-202ENST00000396521 GAGE12JA6NER3 117 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 S100A4P26447 101 aaKnown RBP11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 ZNF80P51504 273 aaPredicted RBP11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 GNG5P63218 68 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 GAGE1Q13065 139 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 GAGE4Q13068 117 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 GAGE5Q13069 117 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 GAGE13Q4V321 117 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 C14orf177Q52M58 125 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 STOML3Q8TAV4 291 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 PLA2G2DQ9UNK4 145 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 PSG8Q9UQ74 426 aa11.48□□□□□ -0.57
EXOSC3-202ENST00000396521 IGKV2D-24A0A075B6R9 120 aa11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 RHODO00212 210 aa11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 HMGB3O15347 200 aaKnown RBP11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 EIF3GO75821 320 aaKnown RBP eCLIP11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 NKX2-5P52952 324 aaPredicted RBP11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 KRTAP10-4P60372 401 aaPredicted RBP11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 FLI1Q01543 452 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms