RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 C1orf43Q9BWL3 253 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 DKK2Q9UBU2 259 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 VPREB3Q9UKI3 123 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 CDKN1BP46527 198 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 KIR3DS1Q14943 382 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 KLHL30-AS1Q8NEE0 82 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 NAA38Q9BRA0 125 aaKnown RBP5.04□□□□□ -1.6
BDNF-203ENST00000395978 ZFAND3Q9H8U3 227 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 MRPL16Q9NX20 251 aaKnown RBP5.04□□□□□ -1.6
BDNF-203ENST00000395978 MRPL35Q9NZE8 188 aaKnown RBP5.04□□□□□ -1.6
BDNF-203ENST00000395978 IGHV1OR15-1A0A075B7D0 117 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 TRBV12-3P01733 135 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 IGF1P05019 195 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 IGLC6P0CF74 106 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 BVES-AS1Q5T3Y7 98 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 SMAD5-AS1Q9Y6J3 95 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 ASPMQ8IZT6 3477 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 A0A1W2PPR1 153 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 K7EMT4 169 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 SPRY2O43597 315 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 APOMO95445 188 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 SAMD5Q5TGI4 173 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 CHAC1Q9BUX1 264 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 TRAV12-2A0A075B6T6 113 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 TMEM238C9JI98 176 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 H7C2G1 150 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 SPATA12Q7Z6I5 190 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 OR5A1Q8NGJ0 315 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 Q96MF0 132 aa5.03□□□□□ -1.6
BDNF-203ENST00000395978 SDHAF1A6NFY7 115 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 ZNF415Q09FC8 603 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 KLK9Q9UKQ9 250 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 RNF114Q9Y508 228 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 SETD2Q9BYW2 2564 aaPredicted RBP5.02□□□□□ -1.61
BDNF-203ENST00000395978 IGHV3-73A0A0B4J1V6 119 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 IGKV3D-20A0A0C4DH25 116 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 F8VRH5 84 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 HOXA3O43365 443 aaPredicted RBP5.02□□□□□ -1.61
BDNF-203ENST00000395978 LGALS1P09382 135 aaKnown RBP5.02□□□□□ -1.61
BDNF-203ENST00000395978 GPHB5Q86YW7 130 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 LINC01619G3V211 115 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 UBE2L6O14933 153 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 MRPS12O15235 138 aaKnown RBP5.02□□□□□ -1.61
BDNF-203ENST00000395978 SAP30O75446 220 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 PRB1P04280 392 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 CD28P10747 220 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 HOXD3P31249 432 aaPredicted RBP5.02□□□□□ -1.61
BDNF-203ENST00000395978 DEFB1P60022 68 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 TRPT1Q86TN4 253 aaKnown RBP5.02□□□□□ -1.61
BDNF-203ENST00000395978 ZNF479Q96JC4 524 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 TP53TG1Q9Y2A0 90 aa5.02□□□□□ -1.61
BDNF-203ENST00000395978 PKD1L2Q7Z442 2459 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 HIVEP2P31629 2446 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 K7EMI3 77 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 COX6CP09669 75 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 LOXL1Q08397 574 aaPredicted RBP5.01□□□□□ -1.61
BDNF-203ENST00000395978 CIRBPQ14011 172 aaKnown RBP5.01□□□□□ -1.61
BDNF-203ENST00000395978 A0A087WX48 190 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 H3BRM9 83 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 EMP1P54849 157 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 HERV-K104P63124 156 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 C19orf54Q5BKX5 351 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 NEGR1Q7Z3B1 354 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 SCRT2Q9NQ03 307 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 ABCA2Q9BZC7 2435 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 HLA-DRB4P13762 266 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 MRPL23Q16540 153 aaKnown RBP5.01□□□□□ -1.61
BDNF-203ENST00000395978 PCP2Q8IVA1 136 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 DEFB125Q8N687 156 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 HLA-DRB4X5D2U9 266 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 BSNQ9UPA5 3926 aa5.01□□□□□ -1.61
BDNF-203ENST00000395978 TRGV2A0A075B6R0 118 aa5□□□□□ -1.61
BDNF-203ENST00000395978 TMEM89A2RUT3 159 aa5□□□□□ -1.61
BDNF-203ENST00000395978 INSP01308 110 aa5□□□□□ -1.61
BDNF-203ENST00000395978 CMC4P56277 68 aaPredicted RBP5□□□□□ -1.61
BDNF-203ENST00000395978 TMEM141Q96I45 108 aa5□□□□□ -1.61
BDNF-203ENST00000395978 KNCNA6PVL3 124 aa5□□□□□ -1.61
BDNF-203ENST00000395978 F8W735 103 aaPredicted RBP5□□□□□ -1.61
BDNF-203ENST00000395978 CRXO43186 299 aaPredicted RBP5□□□□□ -1.61
BDNF-203ENST00000395978 PMVKQ15126 192 aa5□□□□□ -1.61
BDNF-203ENST00000395978 FOXI2Q6ZQN5 318 aa5□□□□□ -1.61
BDNF-203ENST00000395978 RAI1Q7Z5J4 1906 aaPredicted RBP5□□□□□ -1.61
BDNF-203ENST00000395978 TRBV7-9A0A0J9YWB2 115 aa5□□□□□ -1.61
BDNF-203ENST00000395978 GAGE12BA1L429 117 aa5□□□□□ -1.61
BDNF-203ENST00000395978 DEFB113Q30KQ7 82 aa5□□□□□ -1.61
BDNF-203ENST00000395978 UBE2E2Q96LR5 201 aa5□□□□□ -1.61
BDNF-203ENST00000395978 PGPEP1Q9NXJ5 209 aa5□□□□□ -1.61
BDNF-203ENST00000395978 CELSR3Q9NYQ7 3312 aa5□□□□□ -1.61
BDNF-203ENST00000395978 A0A1B0GWB2 263 aa4.99□□□□□ -1.61
BDNF-203ENST00000395978 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
BDNF-203ENST00000395978 IGHG4P01861 327 aa4.99□□□□□ -1.61
BDNF-203ENST00000395978 MED14OSP0DP75 135 aa4.99□□□□□ -1.61
BDNF-203ENST00000395978 RPL39LQ96EH5 51 aaKnown RBP4.99□□□□□ -1.61
BDNF-203ENST00000395978 ABCA12Q86UK0 2595 aa4.99□□□□□ -1.61
BDNF-203ENST00000395978 DOPEY1Q5JWR5 2465 aa4.99□□□□□ -1.61
BDNF-203ENST00000395978 MGAQ8IWI9 3026 aa4.99□□□□□ -1.61
BDNF-203ENST00000395978 TRAV8-2A0A0B4J237 113 aa4.99□□□□□ -1.61
BDNF-203ENST00000395978 PRSS29PA6NIE9 313 aa4.99□□□□□ -1.61
BDNF-203ENST00000395978 RPL13AP40429 203 aaKnown RBP4.99□□□□□ -1.61
BDNF-203ENST00000395978 SFTA2Q6UW10 78 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms