RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 H3BMG7 143 aa7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 CIDEAO60543 219 aa7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 IGHV1-69P01742 117 aa7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 PMVKQ15126 192 aa7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 TIMM17AQ99595 171 aa7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 BPESC1Q9GZL8 116 aa7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 RPL11P62913 178 aaKnown RBP7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 SYT8Q8NBV8 401 aa7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 ODF3Q96PU9 254 aa7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 TRBV20-1A0A075B6N2 111 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 K7EMT4 169 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 WFDC2Q14508 124 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 CDSNQ15517 529 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 RPL39LQ96EH5 51 aaKnown RBP7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 DAZ1Q9NQZ3 744 aaKnown RBP7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 PGPEP1Q9NXJ5 209 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 PIEZO2Q9H5I5 2752 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 C11orf86A6NJI1 115 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 J3KRW8 73 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 IGHG2P01859 326 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 GPHB5Q86YW7 130 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 TSSC4Q9Y5U2 329 aaPredicted RBP7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 SELENOKQ9Y6D0 94 aa7.59□□□□□ -1.19
UBE2D3-208ENST00000394803 TRBV6-5A0A0K0K1A5 114 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 A0A1B0GV72 72 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 NDUFS8O00217 210 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 APOMO95445 188 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 AZU1P20160 251 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 UBE2D1P51668 147 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 TMEM219Q86XT9 240 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 PIMREGQ9BSJ6 248 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 KLLNB2CW77 178 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 COX6B1P14854 86 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 ETDBQ3ZM63 59 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 UNQ9165/PRO28630Q6UXU0 137 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 ZFP2Q6ZN57 461 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 RHPN1-AS1Q9BWJ2 59 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 C1QTNF4Q9BXJ3 329 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 ZNF580Q9UK33 172 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 TP53TG1Q9Y2A0 90 aa7.58□□□□□ -1.2
UBE2D3-208ENST00000394803 SMG1Q96Q15 3661 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 ITPR1Q14643 2758 aa7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 RNF223E7ERA6 249 aa7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 PF4V1P10720 104 aa7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 POLR2KP53803 58 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 RHOHQ15669 191 aa7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 MORN3Q6PF18 240 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 LCNL1Q6ZST4 164 aa7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 MTURNQ8N3F0 131 aa7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 PRO0461Q9UI25 63 aa7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 KIF25-AS1Q9Y6Z4 181 aa7.57□□□□□ -1.2
UBE2D3-208ENST00000394803 IGIPA6NJ69 53 aa7.56□□□□□ -1.2
UBE2D3-208ENST00000394803 LGALS9O00182 355 aa7.56□□□□□ -1.2
UBE2D3-208ENST00000394803 SPAG8Q99932 426 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-208ENST00000394803 PTPRQQ9UMZ3 2332 aa7.56□□□□□ -1.2
UBE2D3-208ENST00000394803 TRBV27A0A0K0K1C4 114 aa7.56□□□□□ -1.2
UBE2D3-208ENST00000394803 GNRH2O43555 120 aa7.56□□□□□ -1.2
UBE2D3-208ENST00000394803 DUSP14O95147 198 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-208ENST00000394803 CFAP126Q5VTH2 177 aa7.56□□□□□ -1.2
UBE2D3-208ENST00000394803 Q6ZQT7 251 aa7.56□□□□□ -1.2
UBE2D3-208ENST00000394803 A6NDX4 124 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 F5H697 171 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 LGALS3P17931 250 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 SUMO4Q6EEV6 95 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 GTSF1LQ9H1H1 148 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 IGLV4-69A0A075B6H9 119 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 A0A0J9YY99 117 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 LINC00315P59091 139 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 UBE2D3P61077 147 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 UBE2D2P62837 147 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 FOXI1Q12951 378 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 AMTNQ6UX39 209 aa7.55□□□□□ -1.2
UBE2D3-208ENST00000394803 LOC107984156A0A0G2JMH3 177 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 A0A1W2PPR1 153 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 TMEM89A2RUT3 159 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 SDHAF1A6NFY7 115 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 TSPAN13O95857 204 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 IGLV1-40P01703 118 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 SNRPD3P62318 126 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 SMAGPQ0VAQ4 97 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 NSUN5P1Q3KNT7 163 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 ZNF876PQ49A33 203 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 TCTEX1D4Q5JR98 221 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 SH2D6Q7Z4S9 175 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 TRPT1Q86TN4 253 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 NFE4Q86UQ8 179 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 ARL17AQ8IVW1 177 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 SLC25A29Q8N8R3 303 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 LINC00527Q9UJ94 153 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 CRYGDP07320 174 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 CD7P09564 240 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 PSMB2P49721 201 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 TMEM170BQ5T4T1 132 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 NDUFA11Q86Y39 141 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 PPDPFLQ8WWR9 84 aa7.54□□□□□ -1.2
UBE2D3-208ENST00000394803 ABCA4P78363 2273 aa7.53□□□□□ -1.2
UBE2D3-208ENST00000394803 AGRNO00468 2067 aa7.53□□□□□ -1.2
UBE2D3-208ENST00000394803 PLEKHB2Q96CS7 222 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms