RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 RNF183Q96D59 192 aa12.48□□□□□ -0.41
CNP-201ENST00000393888 C16orf92Q96LL3 132 aa12.48□□□□□ -0.41
CNP-201ENST00000393888 C20orf173Q96LM9 149 aa12.48□□□□□ -0.41
CNP-201ENST00000393888 ATP6V0E1O15342 81 aa12.48□□□□□ -0.41
CNP-201ENST00000393888 CD7P09564 240 aa12.48□□□□□ -0.41
CNP-201ENST00000393888 PRTN3P24158 256 aa12.48□□□□□ -0.41
CNP-201ENST00000393888 Q8N9W7 124 aa12.48□□□□□ -0.41
CNP-201ENST00000393888 PTPRQQ9UMZ3 2332 aa12.47□□□□□ -0.41
CNP-201ENST00000393888 C11orf86A6NJI1 115 aa12.47□□□□□ -0.41
CNP-201ENST00000393888 CRYGDP07320 174 aa12.47□□□□□ -0.41
CNP-201ENST00000393888 UBE2D3P61077 147 aa12.47□□□□□ -0.41
CNP-201ENST00000393888 UBE2D2P62837 147 aa12.47□□□□□ -0.41
CNP-201ENST00000393888 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
CNP-201ENST00000393888 SVIPQ8NHG7 77 aa12.47□□□□□ -0.41
CNP-201ENST00000393888 C9orf47Q6ZRZ4 202 aa12.47□□□□□ -0.41
CNP-201ENST00000393888 PHLDA3Q9Y5J5 127 aa12.46□□□□□ -0.41
CNP-201ENST00000393888 HRNRQ86YZ3 2850 aaPredicted RBP12.46□□□□□ -0.41
CNP-201ENST00000393888 ANKHD1Q8IWZ3 2542 aaKnown RBP12.46□□□□□ -0.41
CNP-201ENST00000393888 GNRH2O43555 120 aa12.46□□□□□ -0.42
CNP-201ENST00000393888 ARL3P36405 182 aa12.46□□□□□ -0.42
CNP-201ENST00000393888 Q8NA96 180 aa12.46□□□□□ -0.42
CNP-201ENST00000393888 PPDPFLQ8WWR9 84 aa12.46□□□□□ -0.42
CNP-201ENST00000393888 METTL26Q96S19 204 aa12.46□□□□□ -0.42
CNP-201ENST00000393888 SCGB1C2P0DMR2 95 aa12.45□□□□□ -0.42
CNP-201ENST00000393888 TEN1Q86WV5 123 aa12.45□□□□□ -0.42
CNP-201ENST00000393888 DPH3P1Q9H4G8 78 aa12.45□□□□□ -0.42
CNP-201ENST00000393888 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
CNP-201ENST00000393888 TSHBP01222 138 aa12.45□□□□□ -0.42
CNP-201ENST00000393888 CFC1BP0CG36 223 aa12.45□□□□□ -0.42
CNP-201ENST00000393888 CFC1P0CG37 223 aa12.45□□□□□ -0.42
CNP-201ENST00000393888 TSPEAR-AS2P59090 65 aa12.45□□□□□ -0.42
CNP-201ENST00000393888 A0A0J9YY99 117 aa12.44□□□□□ -0.42
CNP-201ENST00000393888 FAM90A27PA6NNH2 459 aa12.44□□□□□ -0.42
CNP-201ENST00000393888 ANXA2RQ3ZCQ2 193 aa12.44□□□□□ -0.42
CNP-201ENST00000393888 FAM110DQ8TAY7 271 aaPredicted RBP12.44□□□□□ -0.42
CNP-201ENST00000393888 LINC00527Q9UJ94 153 aa12.44□□□□□ -0.42
CNP-201ENST00000393888 RPL39P62891 51 aaKnown RBP12.44□□□□□ -0.42
CNP-201ENST00000393888 ANKRD29Q8N6D5 301 aa12.44□□□□□ -0.42
CNP-201ENST00000393888 IGKV3-7A0A075B6H7 116 aa12.43□□□□□ -0.42
CNP-201ENST00000393888 IGLV4-69A0A075B6H9 119 aa12.43□□□□□ -0.42
CNP-201ENST00000393888 RAX2Q96IS3 184 aa12.43□□□□□ -0.42
CNP-201ENST00000393888 TP53TG1Q9Y2A0 90 aa12.43□□□□□ -0.42
CNP-201ENST00000393888 NBASA2RRP1 2371 aa12.43□□□□□ -0.42
CNP-201ENST00000393888 F6UB75 175 aa12.43□□□□□ -0.42
CNP-201ENST00000393888 M0R1W7 72 aa12.43□□□□□ -0.42
CNP-201ENST00000393888 RNASE4P34096 147 aaKnown RBP12.43□□□□□ -0.42
CNP-201ENST00000393888 H7C2G1 150 aa12.42□□□□□ -0.42
CNP-201ENST00000393888 TMEM170BQ5T4T1 132 aa12.42□□□□□ -0.42
CNP-201ENST00000393888 A8MWV9 139 aa12.42□□□□□ -0.42
CNP-201ENST00000393888 ZFP36P26651 326 aaKnown RBP12.42□□□□□ -0.42
CNP-201ENST00000393888 CRIP2P52943 208 aaPredicted RBP12.42□□□□□ -0.42
CNP-201ENST00000393888 GPHB5Q86YW7 130 aa12.42□□□□□ -0.42
CNP-201ENST00000393888 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
CNP-201ENST00000393888 JPT2Q9H910 190 aa12.42□□□□□ -0.42
CNP-201ENST00000393888 MUC4Q99102 2169 aa12.42□□□□□ -0.42
CNP-201ENST00000393888 ASIPP42127 132 aa12.41□□□□□ -0.42
CNP-201ENST00000393888 TRPT1Q86TN4 253 aaKnown RBP12.41□□□□□ -0.42
CNP-201ENST00000393888 IGHV3-30P01768 117 aa12.41□□□□□ -0.42
CNP-201ENST00000393888 ZNF688P0C7X2 276 aa12.41□□□□□ -0.42
CNP-201ENST00000393888 IGHV3-30-5P0DP03 117 aa12.41□□□□□ -0.42
CNP-201ENST00000393888 TIMD4Q96H15 378 aa12.41□□□□□ -0.42
CNP-201ENST00000393888 CELSR1Q9NYQ6 3014 aa12.41□□□□□ -0.42
CNP-201ENST00000393888 EBI3Q14213 229 aa12.4□□□□□ -0.42
CNP-201ENST00000393888 SS18L2Q9UHA2 77 aa12.4□□□□□ -0.42
CNP-201ENST00000393888 ERG28Q9UKR5 140 aa12.4□□□□□ -0.42
CNP-201ENST00000393888 ANAPC13Q9BS18 74 aa12.4□□□□□ -0.42
CNP-201ENST00000393888 TLN1Q9Y490 2541 aaKnown RBP12.39□□□□□ -0.43
CNP-201ENST00000393888 K7ENP7 123 aa12.39□□□□□ -0.43
CNP-201ENST00000393888 EEF1AKMT3Q96AZ1 226 aa12.39□□□□□ -0.43
CNP-201ENST00000393888 MRPL53Q96EL3 112 aaKnown RBP12.39□□□□□ -0.43
CNP-201ENST00000393888 TRAV21A0A0B4J279 112 aa12.39□□□□□ -0.43
CNP-201ENST00000393888 ZNRF2Q8NHG8 242 aa12.39□□□□□ -0.43
CNP-201ENST00000393888 IGHV3-64A0A075B6Q5 118 aa12.38□□□□□ -0.43
CNP-201ENST00000393888 RPL11P62913 178 aaKnown RBP12.38□□□□□ -0.43
CNP-201ENST00000393888 C10orf126Q8N4M7 172 aa12.38□□□□□ -0.43
CNP-201ENST00000393888 C9JAW5 83 aa12.38□□□□□ -0.43
CNP-201ENST00000393888 RNASE3P12724 160 aaKnown RBP12.38□□□□□ -0.43
CNP-201ENST00000393888 HERVK_113P61574 105 aa12.38□□□□□ -0.43
CNP-201ENST00000393888 A0A087WWL8 130 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 CENPVL3A0A0U1RRI6 287 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 LYRM7Q5U5X0 104 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 UNQ9165/PRO28630Q6UXU0 137 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 OR10J6PQ8NGY7 276 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 ITLN2Q8WWU7 325 aaPredicted RBP12.37□□□□□ -0.43
CNP-201ENST00000393888 OPRPNQ99935 248 aaPredicted RBP12.37□□□□□ -0.43
CNP-201ENST00000393888 PRO1854Q9UHT4 67 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 IGIPA6NJ69 53 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 U3KQE9 123 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 ACACBO00763 2458 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 ATRXP46100 2492 aa12.37□□□□□ -0.43
CNP-201ENST00000393888 EIF4EBP3O60516 100 aaPredicted RBP12.36□□□□□ -0.43
CNP-201ENST00000393888 TRBV12-3P01733 135 aa12.36□□□□□ -0.43
CNP-201ENST00000393888 PMVKQ15126 192 aa12.36□□□□□ -0.43
CNP-201ENST00000393888 SLC25A29Q8N8R3 303 aa12.36□□□□□ -0.43
CNP-201ENST00000393888 TRBV20-1A0A075B6N2 111 aa12.36□□□□□ -0.43
CNP-201ENST00000393888 F5H697 171 aa12.36□□□□□ -0.43
CNP-201ENST00000393888 SLC25A20O43772 301 aa12.36□□□□□ -0.43
CNP-201ENST00000393888 ZFAND6Q6FIF0 208 aa12.36□□□□□ -0.43
CNP-201ENST00000393888 TMEM219Q86XT9 240 aa12.36□□□□□ -0.43
CNP-201ENST00000393888 SBSPONQ8IVN8 264 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms