RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 EDN2P20800 178 aa5.96□□□□□ -1.46
VTI1A-201ENST00000393077 SUMO2P61956 95 aaKnown RBP5.96□□□□□ -1.46
VTI1A-201ENST00000393077 FGF23Q9GZV9 251 aaPredicted RBP5.96□□□□□ -1.46
VTI1A-201ENST00000393077 CHD8Q9HCK8 2581 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 TRBV7-7A0A0K0K1E9 115 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 MYCNOSP40205 109 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 B3GALT5-AS1P59052 145 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 RPL11P62913 178 aaKnown RBP5.95□□□□□ -1.46
VTI1A-201ENST00000393077 C9orf106Q8NAJ2 232 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 METRNQ9UJH8 293 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 PYGO1Q9Y3Y4 419 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 A0A0J9YY99 117 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 IGKV1-16P04430 117 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 ERCC8Q13216 396 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 CEMP1Q6PRD7 247 aaPredicted RBP5.95□□□□□ -1.46
VTI1A-201ENST00000393077 TRBV19A0A075B6N1 114 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 IGHG2P01859 326 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 Q6ZT83 130 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 C20orf197Q8N268 126 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 KLF14Q8TD94 323 aaPredicted RBP5.95□□□□□ -1.46
VTI1A-201ENST00000393077 ZMAT4Q9H898 229 aa5.95□□□□□ -1.46
VTI1A-201ENST00000393077 BAALC-AS2P0C853 105 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 EGR2P11161 476 aaPredicted RBP5.94□□□□□ -1.46
VTI1A-201ENST00000393077 RPL18AQ02543 176 aaKnown RBP5.94□□□□□ -1.46
VTI1A-201ENST00000393077 DGAT2L7PQ6IED9 249 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 SDIM1Q6ZPB5 146 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 C7orf69Q9H7B7 122 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 ANKRD11Q6UB99 2663 aaPredicted RBP5.94□□□□□ -1.46
VTI1A-201ENST00000393077 TRAV21A0A0B4J279 112 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 A0A0U1RRA0 63 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 FAM27E3Q08E93 113 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 PIP4P1Q86T03 277 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 PIP4P2Q8N4L2 257 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 C16orf92Q96LL3 132 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 MUC22E2RYF6 1773 aaPredicted RBP5.94□□□□□ -1.46
VTI1A-201ENST00000393077 CRYGAP11844 174 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 IGHV1-2P23083 117 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 TP53TG1Q9Y2A0 90 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 U3KQK5 164 aa5.94□□□□□ -1.46
VTI1A-201ENST00000393077 SLC25A29Q8N8R3 303 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 SLC50A1Q9BRV3 221 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 AGPAT4-IT1Q9H0P7 198 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 K7EM74 188 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 M0R1W7 72 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 CCL21O00585 134 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 RNASE1P07998 156 aaKnown RBP5.93□□□□□ -1.46
VTI1A-201ENST00000393077 GP9P14770 177 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 C1orf159Q96HA4 380 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 ZNF625Q96I27 306 aaPredicted RBP5.93□□□□□ -1.46
VTI1A-201ENST00000393077 KIAA1549LQ6ZVL6 1849 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 A0A1W2PNU3 283 aaPredicted RBP5.93□□□□□ -1.46
VTI1A-201ENST00000393077 IQCF6A8MYZ5 107 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 MDS2Q8NDY4 140 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 U3KQE9 123 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 ANKHD1Q8IWZ3 2542 aaKnown RBP5.93□□□□□ -1.46
VTI1A-201ENST00000393077 TRIAP1O43715 76 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 SPRNQ5BIV9 151 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 MRPL55Q7Z7F7 128 aaKnown RBP5.93□□□□□ -1.46
VTI1A-201ENST00000393077 SBSPONQ8IVN8 264 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 NDUFA4L2Q9NRX3 87 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 S4R3C0 116 aa5.93□□□□□ -1.46
VTI1A-201ENST00000393077 CXCL5P42830 114 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 UBE2E1P51965 193 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 THAP8Q8NA92 274 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 CCL13Q99616 98 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 SIRPDQ9H106 197 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 C11orf86A6NJI1 115 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 GHRHP01286 108 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 FAM74A4Q5TZK3 123 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 C14orf178Q8N769 122 aaPredicted RBP5.92□□□□□ -1.46
VTI1A-201ENST00000393077 CFHR4Q92496 578 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 C17orf77Q96MU5 243 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 TIMM21Q9BVV7 248 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 IGKV3D-15A0A087WSY6 115 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 ADARB2-AS1A8MUL3 147 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 IGHV3-30P01768 117 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 IGHV3-30-5P0DP03 117 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 WT1-ASQ06250 92 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 TEX36Q5VZQ5 186 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 TMEM14CQ9P0S9 112 aa5.92□□□□□ -1.46
VTI1A-201ENST00000393077 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 IGHV3-35A0A0C4DH35 117 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 TRBV30A0A0K0K1B3 111 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 H7C423 109 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 SOCS3O14543 225 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 SPRY2O43597 315 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 ZNF134P52741 427 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 PVRIGQ6DKI7 326 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 DPH3P1Q9H4G8 78 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 TRAV12-2A0A075B6T6 113 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 WT1P19544 449 aaPredicted RBP5.91□□□□□ -1.46
VTI1A-201ENST00000393077 TMEM167AQ8TBQ9 72 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 SHANK2-AS3Q9BTD1 123 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 PRORYQ9H606 182 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 C10orf142B7Z368 130 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 NDUFC2-KCTD14E9PQ53 114 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 DAZAP2Q15038 168 aaPredicted RBP5.91□□□□□ -1.46
VTI1A-201ENST00000393077 FAM201AQ5SY85 155 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms