RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TRAV23DV6A0A075B6W5 121 aa12.6□□□□□ -0.39
SHANK1-204ENST00000391814 H0YGX0 51 aa12.6□□□□□ -0.39
SHANK1-204ENST00000391814 CD59P13987 128 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 C3orf22Q8N5N4 141 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 FER1L5A0AVI2 2057 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 FGF23Q9GZV9 251 aaPredicted RBP12.59□□□□□ -0.39
SHANK1-204ENST00000391814 NOP10Q9NPE3 64 aaKnown RBP12.59□□□□□ -0.39
SHANK1-204ENST00000391814 FRMPD3Q5JV73 1810 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 TEX49A0A1B0GTD5 131 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 VSIG2Q96IQ7 327 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 RNF114Q9Y508 228 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 C11orf86A6NJI1 115 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 Q8N1Y9 231 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 LOXL1Q08397 574 aaPredicted RBP12.59□□□□□ -0.39
SHANK1-204ENST00000391814 NFE4Q86UQ8 179 aa12.59□□□□□ -0.39
SHANK1-204ENST00000391814 SDIM1Q6ZPB5 146 aa12.58□□□□□ -0.4
SHANK1-204ENST00000391814 OBSL1O75147 1896 aa12.58□□□□□ -0.4
SHANK1-204ENST00000391814 ATP5G1P05496 136 aa12.58□□□□□ -0.4
SHANK1-204ENST00000391814 H3BT86 120 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 LECT2O14960 151 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 SPTSSBQ8NFR3 76 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 IGLV3-9A0A075B6K5 115 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 SPRNQ5BIV9 151 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 FAM167A-AS1Q96KT0 104 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 TRIOBPQ9H2D6 2365 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 IGHV1-69P01742 117 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 IGLC6P0CF74 106 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 PIFOQ8TCI5 191 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 LINC01356Q8N9X3 169 aa12.57□□□□□ -0.4
SHANK1-204ENST00000391814 UPK3BQ9BT76 320 aa12.56□□□□□ -0.4
SHANK1-204ENST00000391814 DKK4Q9UBT3 224 aa12.56□□□□□ -0.4
SHANK1-204ENST00000391814 AHCTF1Q8WYP5 2266 aa12.56□□□□□ -0.4
SHANK1-204ENST00000391814 TET1Q8NFU7 2136 aa12.56□□□□□ -0.4
SHANK1-204ENST00000391814 FUSP35637 526 aaKnown RBP eCLIP12.56□□□□□ -0.4
SHANK1-204ENST00000391814 NREPQ16612 68 aa12.56□□□□□ -0.4
SHANK1-204ENST00000391814 TCF20Q9UGU0 1960 aaKnown RBP12.55□□□□□ -0.4
SHANK1-204ENST00000391814 SEC16AO15027 2179 aa12.55□□□□□ -0.4
SHANK1-204ENST00000391814 I3L2K1 104 aa12.55□□□□□ -0.4
SHANK1-204ENST00000391814 UQCRQO14949 82 aa12.55□□□□□ -0.4
SHANK1-204ENST00000391814 LINC00643Q86TS7 51 aa12.55□□□□□ -0.4
SHANK1-204ENST00000391814 MP68P56378 58 aa12.55□□□□□ -0.4
SHANK1-204ENST00000391814 IGLV10-54A0A075B6I4 117 aa12.55□□□□□ -0.4
SHANK1-204ENST00000391814 GDF5OSQ5U4N7 250 aa12.54□□□□□ -0.4
SHANK1-204ENST00000391814 THADAQ6YHU6 1953 aa12.54□□□□□ -0.4
SHANK1-204ENST00000391814 SP5Q6BEB4 398 aaPredicted RBP12.54□□□□□ -0.4
SHANK1-204ENST00000391814 HOXB4P17483 251 aaPredicted RBP12.54□□□□□ -0.4
SHANK1-204ENST00000391814 V9GYY9 64 aa12.54□□□□□ -0.4
SHANK1-204ENST00000391814 FAM236DA0A1B0GTK5 79 aa12.54□□□□□ -0.4
SHANK1-204ENST00000391814 FAM236CP0DP71 79 aa12.54□□□□□ -0.4
SHANK1-204ENST00000391814 C11orf53Q8IXP5 236 aa12.54□□□□□ -0.4
SHANK1-204ENST00000391814 IGLV2-14P01704 120 aa12.54□□□□□ -0.4
SHANK1-204ENST00000391814 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
SHANK1-204ENST00000391814 RLFQ13129 1914 aa12.53□□□□□ -0.4
SHANK1-204ENST00000391814 HIST2H2BCQ6DN03 193 aa12.53□□□□□ -0.4
SHANK1-204ENST00000391814 OPRPNQ99935 248 aaPredicted RBP12.53□□□□□ -0.4
SHANK1-204ENST00000391814 WI2-2373I1.2A0A1W2PRP0 233 aa12.53□□□□□ -0.4
SHANK1-204ENST00000391814 K7EQD1 137 aa12.53□□□□□ -0.4
SHANK1-204ENST00000391814 CLUHP3Q96NS8 147 aa12.53□□□□□ -0.4
SHANK1-204ENST00000391814 C11orf1Q9H5F2 150 aa12.53□□□□□ -0.4
SHANK1-204ENST00000391814 CCDC179H3BU77 68 aa12.52□□□□□ -0.4
SHANK1-204ENST00000391814 RNF152Q8N8N0 203 aa12.52□□□□□ -0.4
SHANK1-204ENST00000391814 ETDCA0A1B0GVM5 59 aa12.52□□□□□ -0.4
SHANK1-204ENST00000391814 ZNF503Q96F45 646 aa12.52□□□□□ -0.41
SHANK1-204ENST00000391814 Q96MF0 132 aa12.52□□□□□ -0.41
SHANK1-204ENST00000391814 CEP290O15078 2479 aa12.52□□□□□ -0.41
SHANK1-204ENST00000391814 BUB3O43684 328 aa12.52□□□□□ -0.41
SHANK1-204ENST00000391814 C10orf105Q8TEF2 133 aa12.52□□□□□ -0.41
SHANK1-204ENST00000391814 AKAP6Q13023 2319 aa12.51□□□□□ -0.41
SHANK1-204ENST00000391814 MRPL55Q7Z7F7 128 aaKnown RBP12.51□□□□□ -0.41
SHANK1-204ENST00000391814 ZMAT4Q9H898 229 aa12.51□□□□□ -0.41
SHANK1-204ENST00000391814 KIAA1671Q9BY89 1806 aa12.51□□□□□ -0.41
SHANK1-204ENST00000391814 LYPD6Q86Y78 171 aa12.51□□□□□ -0.41
SHANK1-204ENST00000391814 FNDC1Q4ZHG4 1894 aaPredicted RBP12.51□□□□□ -0.41
SHANK1-204ENST00000391814 RMI2Q96E14 147 aa12.51□□□□□ -0.41
SHANK1-204ENST00000391814 CTRLP40313 264 aa12.51□□□□□ -0.41
SHANK1-204ENST00000391814 JMJD7-PLA2G4BH0Y9G9 81 aa12.51□□□□□ -0.41
SHANK1-204ENST00000391814 RTTNQ86VV8 2226 aa12.5□□□□□ -0.41
SHANK1-204ENST00000391814 ABCA7Q8IZY2 2146 aa12.5□□□□□ -0.41
SHANK1-204ENST00000391814 TRBV12-3P01733 135 aa12.5□□□□□ -0.41
SHANK1-204ENST00000391814 YPEL4Q96NS1 127 aa12.5□□□□□ -0.41
SHANK1-204ENST00000391814 PRSS33Q8NF86 280 aa12.5□□□□□ -0.41
SHANK1-204ENST00000391814 IGLV1-44P01699 117 aa12.5□□□□□ -0.41
SHANK1-204ENST00000391814 TICRRQ7Z2Z1 1910 aa12.5□□□□□ -0.41
SHANK1-204ENST00000391814 MSMBP08118 114 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 KRTAP27-1Q3LI81 207 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 ESM1Q9NQ30 184 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 IGHV3-30P01768 117 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 IGHV3-33P01772 117 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 IGHV3-30-3P0DP02 117 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 IGHV3-30-5P0DP03 117 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 APRG1Q8IVJ8 170 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 NDUFC2-KCTD14E9PQ53 114 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 PRR30Q53SZ7 412 aaPredicted RBP12.49□□□□□ -0.41
SHANK1-204ENST00000391814 C19orf71A6NCJ1 209 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 K7EIM0 57 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 APOC4P55056 127 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 NCOR1O75376 2440 aa12.49□□□□□ -0.41
SHANK1-204ENST00000391814 C20orf197Q8N268 126 aa12.48□□□□□ -0.41
SHANK1-204ENST00000391814 LTBP1Q14766 1721 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms