RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 SPINK13Q1W4C9 94 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 VMA21Q3ZAQ7 101 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 HACD4Q5VWC8 232 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 SPINK6Q6UWN8 80 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 TMED4Q7Z7H5 227 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 OR4C12Q96R67 309 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 STOML2Q9UJZ1 356 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 NINQ8N4C6 2090 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 DNAH3Q8TD57 4116 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 VPS13BQ7Z7G8 4022 aa0.1□□□□□ -2.39
RNU6-48P-201ENST00000384161 ZCCHC11Q5TAX3 1644 aaKnown RBP0.09□□□□□ -2.39
RNU6-48P-201ENST00000384161 FLGP20930 4061 aaPredicted RBP0.09□□□□□ -2.39
RNU6-48P-201ENST00000384161 EIF3AQ14152 1382 aaKnown RBP0.09□□□□□ -2.39
RNU6-48P-201ENST00000384161 H3BQV1 296 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 SULT1C4O75897 302 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 IGHV3-30P01768 117 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 IGHV3-30-5P0DP03 117 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 RPL19P84098 196 aaKnown RBP0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 RTL8BQ17RB0 113 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 LINC00269Q8N2A0 174 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 PLEKHB2Q96CS7 222 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 AP1S3Q96PC3 154 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 NABP2Q9BQ15 211 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 LIMD2Q9BT23 127 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 LPAR5Q9H1C0 372 aa0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 NUP210Q8TEM1 1887 aaPredicted RBP0.09□□□□□ -2.4
RNU6-48P-201ENST00000384161 USP54Q70EL1 1684 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 CUX1P39880 1505 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 SMARCA2P51531 1590 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 CEP170BQ9Y4F5 1589 aaPredicted RBP0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 TRAPPC8Q9Y2L5 1435 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 MT-ND6P03923 174 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 FABP4P15090 132 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 MRPS15P82914 257 aaKnown RBP0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 CASC2Q6XLA1 102 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 ZCCHC23Q6ZST2 131 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 OR4B1Q8NGF8 309 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 OR5AK2Q8NH90 309 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 NAT8BQ9UHF3 227 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 MAP3K4Q9Y6R4 1608 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 BIVM-ERCC5R4GMW8 1640 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 CTTNBP2Q8WZ74 1663 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 FAM135AQ9P2D6 1515 aa0.08□□□□□ -2.4
RNU6-48P-201ENST00000384161 TRPM7Q96QT4 1865 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 NRKQ7Z2Y5 1582 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 TANC2Q9HCD6 1990 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 LAMC1P11047 1609 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 ALKQ9UM73 1620 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 PRORSD1PA6NEY8 169 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 KPNA4O00629 521 aaPredicted RBP0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 TCTAP57738 103 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 GNG3P63215 75 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 XAF1Q6GPH4 301 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 CCL4L1Q8NHW4 92 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 ISOC1Q96CN7 298 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 SPRR2FQ96RM1 72 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 SS18L2Q9UHA2 77 aa0.07□□□□□ -2.4
RNU6-48P-201ENST00000384161 COL14A1Q05707 1796 aaKnown RBP0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 XIRP1Q702N8 1843 aaKnown RBP0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 TMEM131LA2VDJ0 1609 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 LRP6O75581 1613 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 MFSD11O43934 449 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 TRACP01848 142 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 SMR3BP02814 79 aaPredicted RBP0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 CSN2P05814 226 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 RPS3P23396 243 aaKnown RBP eCLIP0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 NEDD8Q15843 81 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 IZUMO2Q6UXV1 221 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 DIRC1Q969H9 104 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 CHD1O14646 1710 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 MYO7AQ13402 2215 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 LAMC3Q9Y6N6 1575 aa0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 AFDNP55196 1824 aaKnown RBP0.06□□□□□ -2.4
RNU6-48P-201ENST00000384161 DNAH17Q9UFH2 4485 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 EEA1Q15075 1411 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 C10orf71Q711Q0 1435 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 WIZO95785 1651 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 PKDREJQ9NTG1 2253 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 MAPKBP1O60336 1514 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 C5orf58C9J3I9 102 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 GYPBP06028 91 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 EVI2AP22794 236 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 NDUFA6P56556 154 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 KRTAP20-2Q3LI61 65 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 CCSMST1Q4G0I0 132 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 BORCS8Q96FH0 119 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 CIB3Q96Q77 187 aaPredicted RBP0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 NUBP2Q9Y5Y2 271 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 KIF13AQ9H1H9 1805 aa0.05□□□□□ -2.4
RNU6-48P-201ENST00000384161 PPIP5K1Q6PFW1 1433 aa0.04□□□□□ -2.4
RNU6-48P-201ENST00000384161 THOC2Q8NI27 1593 aaKnown RBP0.04□□□□□ -2.4
RNU6-48P-201ENST00000384161 SAA1P0DJI8 122 aaPredicted RBP0.04□□□□□ -2.4
RNU6-48P-201ENST00000384161 RPL37P61927 97 aaKnown RBP0.04□□□□□ -2.4
RNU6-48P-201ENST00000384161 GLYATL3Q5SZD4 288 aa0.04□□□□□ -2.4
RNU6-48P-201ENST00000384161 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.04□□□□□ -2.4
RNU6-48P-201ENST00000384161 AP3S1Q92572 193 aa0.04□□□□□ -2.4
RNU6-48P-201ENST00000384161 BIN3Q9NQY0 253 aa0.04□□□□□ -2.4
RNU6-48P-201ENST00000384161 OTORQ9NRC9 128 aa0.04□□□□□ -2.4
RNU6-48P-201ENST00000384161 IL20Q9NYY1 176 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms