RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 CTSGP08311 255 aa13.27□□□□□ -0.28
SNAPC3-202ENST00000380821 MAPK1IP1LQ8NDC0 245 aa13.27□□□□□ -0.28
SNAPC3-202ENST00000380821 IGLV2-23P01705 113 aa13.27□□□□□ -0.28
SNAPC3-202ENST00000380821 RITA1Q96K30 269 aa13.27□□□□□ -0.28
SNAPC3-202ENST00000380821 DEFB105AQ8NG35 78 aa13.27□□□□□ -0.29
SNAPC3-202ENST00000380821 LGALS9O00182 355 aa13.27□□□□□ -0.29
SNAPC3-202ENST00000380821 SPRNQ5BIV9 151 aa13.27□□□□□ -0.29
SNAPC3-202ENST00000380821 OPRPNQ99935 248 aaPredicted RBP13.27□□□□□ -0.29
SNAPC3-202ENST00000380821 C11orf1Q9H5F2 150 aa13.27□□□□□ -0.29
SNAPC3-202ENST00000380821 NDUFS5O43920 106 aa13.26□□□□□ -0.29
SNAPC3-202ENST00000380821 PHF3Q92576 2039 aaKnown RBP13.26□□□□□ -0.29
SNAPC3-202ENST00000380821 BUB3O43684 328 aa13.26□□□□□ -0.29
SNAPC3-202ENST00000380821 Q6ZQT7 251 aa13.26□□□□□ -0.29
SNAPC3-202ENST00000380821 JMJD7-PLA2G4BH0Y9G9 81 aa13.26□□□□□ -0.29
SNAPC3-202ENST00000380821 PLA2G2CQ5R387 149 aa13.26□□□□□ -0.29
SNAPC3-202ENST00000380821 SVILO95425 2214 aa13.26□□□□□ -0.29
SNAPC3-202ENST00000380821 IGKV3D-7A0A0C4DH55 119 aa13.25□□□□□ -0.29
SNAPC3-202ENST00000380821 SPRY2O43597 315 aa13.25□□□□□ -0.29
SNAPC3-202ENST00000380821 ODF1Q14990 250 aa13.25□□□□□ -0.29
SNAPC3-202ENST00000380821 C5orf38Q86SI9 138 aa13.25□□□□□ -0.29
SNAPC3-202ENST00000380821 PTPRZ1P23471 2315 aaPredicted RBP13.25□□□□□ -0.29
SNAPC3-202ENST00000380821 ESPL1Q14674 2120 aa13.25□□□□□ -0.29
SNAPC3-202ENST00000380821 IGLV2-14P01704 120 aa13.25□□□□□ -0.29
SNAPC3-202ENST00000380821 KIAA1671Q9BY89 1806 aa13.25□□□□□ -0.29
SNAPC3-202ENST00000380821 IGKV2D-24A0A075B6R9 120 aa13.24□□□□□ -0.29
SNAPC3-202ENST00000380821 COX7A2LO14548 114 aa13.24□□□□□ -0.29
SNAPC3-202ENST00000380821 HELZP42694 1942 aaKnown RBP13.24□□□□□ -0.29
SNAPC3-202ENST00000380821 ETDCA0A1B0GVM5 59 aa13.24□□□□□ -0.29
SNAPC3-202ENST00000380821 ATP5G1P05496 136 aa13.24□□□□□ -0.29
SNAPC3-202ENST00000380821 DEFB112Q30KQ8 113 aa13.24□□□□□ -0.29
SNAPC3-202ENST00000380821 FANCMQ8IYD8 2048 aa13.23□□□□□ -0.29
SNAPC3-202ENST00000380821 A0A0J9YY99 117 aa13.23□□□□□ -0.29
SNAPC3-202ENST00000380821 VSIG2Q96IQ7 327 aa13.23□□□□□ -0.29
SNAPC3-202ENST00000380821 MGAMO43451 1857 aa13.23□□□□□ -0.29
SNAPC3-202ENST00000380821 FRMPD3Q5JV73 1810 aa13.23□□□□□ -0.29
SNAPC3-202ENST00000380821 IGKV1OR2-108A0A075B7D4 117 aa13.23□□□□□ -0.29
SNAPC3-202ENST00000380821 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
SNAPC3-202ENST00000380821 TEX22C9J3V5 150 aa13.23□□□□□ -0.29
SNAPC3-202ENST00000380821 PRB1P04280 392 aa13.23□□□□□ -0.29
SNAPC3-202ENST00000380821 TMEM61Q8N0U2 210 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 SPTSSBQ8NFR3 76 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 CGB3P0DN86 165 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 UBE2BP63146 152 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 HIST2H2BCQ6DN03 193 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 MP68P56378 58 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 RBX1P62877 108 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 RPL39P62891 51 aaKnown RBP13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 C1orf195Q5TG92 126 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 AJUBAQ96IF1 538 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 YLPM1P49750 1951 aaKnown RBP13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 CCL24O00175 119 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 IGHV4-59P01825 116 aa13.22□□□□□ -0.29
SNAPC3-202ENST00000380821 RP1L1Q8IWN7 2480 aaPredicted RBP13.21□□□□□ -0.29
SNAPC3-202ENST00000380821 SPATA12Q7Z6I5 190 aa13.21□□□□□ -0.29
SNAPC3-202ENST00000380821 TANC1Q9C0D5 1861 aa13.21□□□□□ -0.29
SNAPC3-202ENST00000380821 CXCL5P42830 114 aa13.21□□□□□ -0.3
SNAPC3-202ENST00000380821 RPL18AQ02543 176 aaKnown RBP13.21□□□□□ -0.3
SNAPC3-202ENST00000380821 CAMK2N2Q96S95 79 aa13.21□□□□□ -0.3
SNAPC3-202ENST00000380821 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
SNAPC3-202ENST00000380821 PTH2Q96A98 100 aa13.2□□□□□ -0.3
SNAPC3-202ENST00000380821 MRPL36Q9P0J6 103 aaKnown RBP13.2□□□□□ -0.3
SNAPC3-202ENST00000380821 PLXND1Q9Y4D7 1925 aa13.2□□□□□ -0.3
SNAPC3-202ENST00000380821 PRB2P02812 416 aaPredicted RBP13.2□□□□□ -0.3
SNAPC3-202ENST00000380821 GYPEP15421 78 aa13.2□□□□□ -0.3
SNAPC3-202ENST00000380821 TTTY13Q9BZ97 58 aa13.2□□□□□ -0.3
SNAPC3-202ENST00000380821 PRAC2D3DTV9 90 aa13.2□□□□□ -0.3
SNAPC3-202ENST00000380821 K7EMT4 169 aa13.2□□□□□ -0.3
SNAPC3-202ENST00000380821 IGHV1-58A0A0C4DH39 117 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 M0QXV9 152 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 NREPQ16612 68 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 IGFL2Q6UWQ7 119 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 CLEC2BQ92478 149 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 DOCK11Q5JSL3 2073 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 ODF3L1Q8IXM7 274 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 Q8N1Y9 231 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 IGHV4-4A0A075B6R2 117 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 NDUFV3P56181 108 aaKnown RBP13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 NDUFA11Q86Y39 141 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 C5orf56Q8N8D9 126 aa13.19□□□□□ -0.3
SNAPC3-202ENST00000380821 SLURP1P55000 103 aa13.18□□□□□ -0.3
SNAPC3-202ENST00000380821 ZNF503Q96F45 646 aa13.18□□□□□ -0.3
SNAPC3-202ENST00000380821 CACNA1DQ01668 2161 aa13.18□□□□□ -0.3
SNAPC3-202ENST00000380821 TRBV7-3A0A075B6L6 115 aa13.18□□□□□ -0.3
SNAPC3-202ENST00000380821 A0A1B0GXF2 115 aa13.18□□□□□ -0.3
SNAPC3-202ENST00000380821 C2orf70A6NJV1 201 aa13.18□□□□□ -0.3
SNAPC3-202ENST00000380821 Q8N9W7 124 aa13.18□□□□□ -0.3
SNAPC3-202ENST00000380821 ASXL3Q9C0F0 2248 aa13.17□□□□□ -0.3
SNAPC3-202ENST00000380821 SDK2Q58EX2 2172 aa13.17□□□□□ -0.3
SNAPC3-202ENST00000380821 CRYGBP07316 175 aa13.17□□□□□ -0.3
SNAPC3-202ENST00000380821 DAND5Q8N907 189 aa13.17□□□□□ -0.3
SNAPC3-202ENST00000380821 NCR3O14931 201 aa13.17□□□□□ -0.3
SNAPC3-202ENST00000380821 CHKB-CPT1BH3BT56 60 aa13.16□□□□□ -0.3
SNAPC3-202ENST00000380821 TMEM256-PLSCR3K7ERE1 68 aa13.16□□□□□ -0.3
SNAPC3-202ENST00000380821 LECT2O14960 151 aa13.16□□□□□ -0.3
SNAPC3-202ENST00000380821 MAP1BP46821 2468 aaKnown RBP13.16□□□□□ -0.3
SNAPC3-202ENST00000380821 FRMD6-AS1P0C7T7 363 aa13.15□□□□□ -0.3
SNAPC3-202ENST00000380821 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
SNAPC3-202ENST00000380821 NUP210Q8TEM1 1887 aaPredicted RBP13.15□□□□□ -0.3
SNAPC3-202ENST00000380821 KIAA2026Q5HYC2 2103 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms