RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ESM1Q9NQ30 184 aa17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 C9orf66Q5T8R8 295 aa17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 WIPF2Q8TF74 440 aaPredicted RBP17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 KMT2EQ8IZD2 1858 aa17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 NRGNQ92686 78 aa17.25■□□□□ 0.35
TM9SF3-201ENST00000371142 BAALC-AS2P0C853 105 aa17.25■□□□□ 0.35
TM9SF3-201ENST00000371142 GAGE12HA6NDE8 117 aa17.25■□□□□ 0.35
TM9SF3-201ENST00000371142 K7EQD1 137 aa17.25■□□□□ 0.35
TM9SF3-201ENST00000371142 ORMDL1Q9P0S3 153 aa17.25■□□□□ 0.35
TM9SF3-201ENST00000371142 LENEPQ9Y5L5 61 aa17.24■□□□□ 0.35
TM9SF3-201ENST00000371142 K7EIM0 57 aa17.24■□□□□ 0.35
TM9SF3-201ENST00000371142 C16orf74Q96GX8 76 aa17.24■□□□□ 0.35
TM9SF3-201ENST00000371142 Q8NFD4 153 aa17.24■□□□□ 0.35
TM9SF3-201ENST00000371142 FRMPD3Q5JV73 1810 aa17.23■□□□□ 0.35
TM9SF3-201ENST00000371142 MSRB1Q9NZV6 116 aa17.23■□□□□ 0.35
TM9SF3-201ENST00000371142 SPANXA1Q9NS26 97 aa17.22■□□□□ 0.35
TM9SF3-201ENST00000371142 CCL25O15444 150 aa17.22■□□□□ 0.35
TM9SF3-201ENST00000371142 CAMK2N2Q96S95 79 aa17.22■□□□□ 0.35
TM9SF3-201ENST00000371142 RIF1Q5UIP0 2472 aaKnown RBP17.22■□□□□ 0.35
TM9SF3-201ENST00000371142 IGLV11-55A0A075B6I3 123 aa17.22■□□□□ 0.35
TM9SF3-201ENST00000371142 Q6ZVH6 145 aa17.22■□□□□ 0.35
TM9SF3-201ENST00000371142 K7EMI3 77 aa17.21■□□□□ 0.35
TM9SF3-201ENST00000371142 ATP6V0E2Q8NHE4 81 aa17.21■□□□□ 0.35
TM9SF3-201ENST00000371142 ICOSQ9Y6W8 199 aa17.21■□□□□ 0.35
TM9SF3-201ENST00000371142 HERV-K104P63124 156 aa17.21■□□□□ 0.35
TM9SF3-201ENST00000371142 IGHV4OR15-8A0A075B7B6 117 aa17.2■□□□□ 0.34
TM9SF3-201ENST00000371142 A0A087WW49 117 aa17.2■□□□□ 0.34
TM9SF3-201ENST00000371142 ETDCA0A1B0GVM5 59 aa17.2■□□□□ 0.34
TM9SF3-201ENST00000371142 CTSGP08311 255 aa17.2■□□□□ 0.34
TM9SF3-201ENST00000371142 IGHV4-28A0A0C4DH34 117 aa17.19■□□□□ 0.34
TM9SF3-201ENST00000371142 CDPF1Q6NVV7 123 aa17.19■□□□□ 0.34
TM9SF3-201ENST00000371142 C16orf54Q6UWD8 224 aa17.19■□□□□ 0.34
TM9SF3-201ENST00000371142 PATE2Q6UY27 113 aa17.19■□□□□ 0.34
TM9SF3-201ENST00000371142 ZFP2Q6ZN57 461 aa17.18■□□□□ 0.34
TM9SF3-201ENST00000371142 LINC00173Q6ZV60 143 aa17.18■□□□□ 0.34
TM9SF3-201ENST00000371142 IGFL2Q6UWQ7 119 aa17.18■□□□□ 0.34
TM9SF3-201ENST00000371142 SPART-AS1P0CW21 52 aa17.18■□□□□ 0.34
TM9SF3-201ENST00000371142 MRPL23Q16540 153 aaKnown RBP17.18■□□□□ 0.34
TM9SF3-201ENST00000371142 LYPD6BQ8NI32 183 aa17.18■□□□□ 0.34
TM9SF3-201ENST00000371142 IGKV1-17P01599 117 aa17.18■□□□□ 0.34
TM9SF3-201ENST00000371142 C5orf56Q8N8D9 126 aa17.18■□□□□ 0.34
TM9SF3-201ENST00000371142 GPR179Q6PRD1 2367 aa17.17■□□□□ 0.34
TM9SF3-201ENST00000371142 ATP5G1P05496 136 aa17.17■□□□□ 0.34
TM9SF3-201ENST00000371142 A0A0J9YXV3 536 aa17.17■□□□□ 0.34
TM9SF3-201ENST00000371142 HIST2H2BCQ6DN03 193 aa17.17■□□□□ 0.34
TM9SF3-201ENST00000371142 Q8N9W7 124 aa17.17■□□□□ 0.34
TM9SF3-201ENST00000371142 TIRAPP58753 221 aa17.17■□□□□ 0.34
TM9SF3-201ENST00000371142 KRTAP27-1Q3LI81 207 aa17.17■□□□□ 0.34
TM9SF3-201ENST00000371142 COX7A2LO14548 114 aa17.16■□□□□ 0.34
TM9SF3-201ENST00000371142 ZNF503Q96F45 646 aa17.16■□□□□ 0.34
TM9SF3-201ENST00000371142 PRAC2D3DTV9 90 aa17.16■□□□□ 0.34
TM9SF3-201ENST00000371142 MUSTN1Q8IVN3 82 aa17.15■□□□□ 0.34
TM9SF3-201ENST00000371142 PRSS47A8MTI9 375 aa17.15■□□□□ 0.34
TM9SF3-201ENST00000371142 ADORA2A-AS1P86434 159 aa17.15■□□□□ 0.34
TM9SF3-201ENST00000371142 CCL18P55774 89 aa17.15■□□□□ 0.34
TM9SF3-201ENST00000371142 DAZ2Q13117 558 aaKnown RBP17.15■□□□□ 0.34
TM9SF3-201ENST00000371142 DAZ4Q86SG3 579 aaKnown RBP17.15■□□□□ 0.34
TM9SF3-201ENST00000371142 SND1-IT1Q9HBX3 110 aa17.15■□□□□ 0.34
TM9SF3-201ENST00000371142 DAZ3Q9NR90 486 aaKnown RBP17.15■□□□□ 0.34
TM9SF3-201ENST00000371142 Q8N1Y9 231 aa17.14■□□□□ 0.34
TM9SF3-201ENST00000371142 RNF152Q8N8N0 203 aa17.14■□□□□ 0.34
TM9SF3-201ENST00000371142 C10orf105Q8TEF2 133 aa17.14■□□□□ 0.34
TM9SF3-201ENST00000371142 COX7B2Q8TF08 81 aa17.14■□□□□ 0.34
TM9SF3-201ENST00000371142 ANAPC1Q9H1A4 1944 aa17.14■□□□□ 0.33
TM9SF3-201ENST00000371142 EML6Q6ZMW3 1958 aa17.14■□□□□ 0.33
TM9SF3-201ENST00000371142 TANC1Q9C0D5 1861 aa17.13■□□□□ 0.33
TM9SF3-201ENST00000371142 RPL39P62891 51 aaKnown RBP17.13■□□□□ 0.33
TM9SF3-201ENST00000371142 DAND5Q8N907 189 aa17.13■□□□□ 0.33
TM9SF3-201ENST00000371142 F8W735 103 aaPredicted RBP17.13■□□□□ 0.33
TM9SF3-201ENST00000371142 DEFB4AO15263 64 aa17.12■□□□□ 0.33
TM9SF3-201ENST00000371142 NCR3O14931 201 aa17.12■□□□□ 0.33
TM9SF3-201ENST00000371142 NUPR1O60356 82 aa17.12■□□□□ 0.33
TM9SF3-201ENST00000371142 SPANXDQ9BXN6 97 aa17.12■□□□□ 0.33
TM9SF3-201ENST00000371142 DEFB1P60022 68 aa17.12■□□□□ 0.33
TM9SF3-201ENST00000371142 TIMM17AQ99595 171 aa17.12■□□□□ 0.33
TM9SF3-201ENST00000371142 C2orf70A6NJV1 201 aa17.11■□□□□ 0.33
TM9SF3-201ENST00000371142 RBM3P98179 157 aaKnown RBP17.11■□□□□ 0.33
TM9SF3-201ENST00000371142 ZFP36P26651 326 aaKnown RBP17.11■□□□□ 0.33
TM9SF3-201ENST00000371142 SPTAN1Q13813 2472 aaKnown RBP17.11■□□□□ 0.33
TM9SF3-201ENST00000371142 ANKRD39Q53RE8 183 aa17.1■□□□□ 0.33
TM9SF3-201ENST00000371142 FUSP35637 526 aaKnown RBP eCLIP17.1■□□□□ 0.33
TM9SF3-201ENST00000371142 WI2-2373I1.2A0A1W2PRP0 233 aa17.1■□□□□ 0.33
TM9SF3-201ENST00000371142 TEX48A0A1B0GUV7 120 aa17.1■□□□□ 0.33
TM9SF3-201ENST00000371142 SH2D6Q7Z4S9 175 aa17.1■□□□□ 0.33
TM9SF3-201ENST00000371142 IGLL5B9A064 214 aa17.09■□□□□ 0.33
TM9SF3-201ENST00000371142 GTSF1Q8WW33 167 aa17.09■□□□□ 0.33
TM9SF3-201ENST00000371142 HHLA3Q9XRX5 114 aa17.09■□□□□ 0.33
TM9SF3-201ENST00000371142 A4D1N5 150 aa17.09■□□□□ 0.33
TM9SF3-201ENST00000371142 TEX22C9J3V5 150 aa17.08■□□□□ 0.33
TM9SF3-201ENST00000371142 NBASA2RRP1 2371 aa17.08■□□□□ 0.32
TM9SF3-201ENST00000371142 PRB2P02812 416 aaPredicted RBP17.08■□□□□ 0.32
TM9SF3-201ENST00000371142 NOTCH3Q9UM47 2321 aa17.08■□□□□ 0.32
TM9SF3-201ENST00000371142 PLA2G2EQ9NZK7 142 aa17.07■□□□□ 0.32
TM9SF3-201ENST00000371142 Q8N7P7 452 aa17.07■□□□□ 0.32
TM9SF3-201ENST00000371142 NCKAP5O14513 1909 aa17.07■□□□□ 0.32
TM9SF3-201ENST00000371142 DYSFO75923 2080 aa17.07■□□□□ 0.32
TM9SF3-201ENST00000371142 DEFB135Q30KP9 77 aa17.06■□□□□ 0.32
TM9SF3-201ENST00000371142 FAM167A-AS1Q96KT0 104 aa17.06■□□□□ 0.32
TM9SF3-201ENST00000371142 MRPL36Q9P0J6 103 aaKnown RBP17.06■□□□□ 0.32
TM9SF3-201ENST00000371142 DEFB125Q8N687 156 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms