RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 MUC21A0A0G2JKD1 596 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 A0A1W2PP18 115 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 MCRIP1C9JLW8 97 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 H3BT86 120 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 TMEM256-PLSCR3K7ERE1 68 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 SYNGR2O43760 224 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 NXPH4O95158 308 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 RBP4P02753 201 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 SLC25A5P05141 298 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 SRP19P09132 144 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 INAFM2P0DMQ5 153 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 IGLC2P0DOY2 106 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 IGLC3P0DOY3 106 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 IGHV3-43DP0DP04 118 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 TPT1P13693 172 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 ADCYAP1P18509 176 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 IL3RAP26951 378 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 DAPP51397 102 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 ZNF80P51504 273 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 RPL23P62829 140 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 SEC11AP67812 179 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 HBBP68871 147 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 REG3AQ06141 175 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 MARCH3Q86UD3 253 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 MDP1Q86V88 176 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 OR5H2Q8NGV7 314 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 FLVCR1-AS1Q8TAF5 88 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 STAG3L4Q8TBR4 150 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 SHANK2-AS3Q9BTD1 123 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 PARLQ9H300 379 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 ST20Q9HBF5 79 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 TXNL4BQ9NX01 149 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 TP73-AS1Q9UF72 201 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 A0A087X002 238 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 TRGV5A0A0B4J1U4 118 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 IGKV1D-43A0A0B4J1Z2 117 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 LOC107986453A0A1B0GWG9 222 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 FAM24AA6NFZ4 105 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 K7EQG2 157 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 PLXNB1O43157 2135 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 SIX6O95475 246 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 CD3DP04234 171 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 HLA-DPB1P04440 258 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 SLC25A4P12235 298 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 POLR2JP52435 117 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 SNRPD3P62318 126 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 GNB2P62879 340 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 UBE2BP63146 152 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 SPRNQ5BIV9 151 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 TMEM91Q6ZNR0 172 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 Q6ZRP5 223 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 SLC25A42Q86VD7 318 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 APCDD1LQ8NCL9 501 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 OR8A1Q8NGG7 326 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 VSTM2AQ8TAG5 236 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 IMMP2LQ96T52 175 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 SLC25A2Q9BXI2 301 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 RPS10P5Q9NQ39 176 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 CACFD1Q9UGQ2 172 aa3.66□□□□□ -1.82
ECHDC1-204ENST00000368292 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.82
ECHDC1-204ENST00000368292 IGHV3-38A0A0C4DH36 116 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 GRIFINA4D1Z8 144 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 H3BRM9 83 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 PLA2G10O15496 165 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 HYPMO75409 117 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 GABARAPO95166 117 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 SLC25A14O95258 325 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 IGKV1-5P01602 117 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 SPINT3P49223 89 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 CRISP3P54108 245 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 FOXF1Q12946 379 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 C17orf58Q2M2W7 97 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 ZNF876PQ49A33 203 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 PHF5AQ7RTV0 110 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 PCP2Q8IVA1 136 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 NKAPP1Q8N9T2 125 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 TAF15Q92804 592 aaKnown RBP eCLIP3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 AIG1Q9NVV5 245 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 RABAC1Q9UI14 185 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 CSMD3Q7Z407 3707 aa3.65□□□□□ -1.83
ECHDC1-204ENST00000368292 MED12LQ86YW9 2145 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 TMEM235A6NFC5 223 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 ZFP92A6NM28 416 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 ZNF253O75346 499 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 GYPBP06028 91 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 TRGC1P0CF51 173 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 CFC1BP0CG36 223 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 CFC1P0CG37 223 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 S100A4P26447 101 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 TMEM155Q4W5P6 130 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 H2AFVQ71UI9 128 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 GPHB5Q86YW7 130 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 ZNF101Q8IZC7 436 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 TMEM61Q8N0U2 210 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 LINC01555Q8NAE3 123 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 MORN4Q8NDC4 146 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 LSM10Q969L4 123 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 PRELID3AQ96N28 172 aa3.64□□□□□ -1.83
ECHDC1-204ENST00000368292 PYGO2Q9BRQ0 406 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms