RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 SUMO4Q6EEV6 95 aa16.33■□□□□ 0.2
SMURF1-201ENST00000361125 ARFGEF3Q5TH69 2177 aa16.33■□□□□ 0.2
SMURF1-201ENST00000361125 IGKV1OR2-108A0A075B7D4 117 aa16.33■□□□□ 0.2
SMURF1-201ENST00000361125 FGF6P10767 208 aa16.33■□□□□ 0.2
SMURF1-201ENST00000361125 CCL25O15444 150 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 PRAC2D3DTV9 90 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 BUB3O43684 328 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 FRMD6-AS1P0C7T7 363 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 ZNF493Q6ZR52 646 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 SCRT2Q9NQ03 307 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 H3BMM0 161 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 TAL2Q16559 108 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 UBE2WQ96B02 151 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 MSRB1Q9NZV6 116 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 LENEPQ9Y5L5 61 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 DENND4AQ7Z401 1863 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 WNK2Q9Y3S1 2297 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 WI2-2373I1.2A0A1W2PRP0 233 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 PCP2Q8IVA1 136 aa16.32■□□□□ 0.2
SMURF1-201ENST00000361125 IGKV2D-24A0A075B6R9 120 aa16.31■□□□□ 0.2
SMURF1-201ENST00000361125 PLA2G5P39877 138 aa16.31■□□□□ 0.2
SMURF1-201ENST00000361125 DEFB125Q8N687 156 aa16.31■□□□□ 0.2
SMURF1-201ENST00000361125 IGLV1-47P01700 117 aa16.31■□□□□ 0.2
SMURF1-201ENST00000361125 TRBV20-1A0A075B6N2 111 aa16.3■□□□□ 0.2
SMURF1-201ENST00000361125 NBASA2RRP1 2371 aa16.3■□□□□ 0.2
SMURF1-201ENST00000361125 GTSF1Q8WW33 167 aa16.3■□□□□ 0.2
SMURF1-201ENST00000361125 PIFOQ8TCI5 191 aa16.3■□□□□ 0.2
SMURF1-201ENST00000361125 SIRPDQ9H106 197 aa16.29■□□□□ 0.2
SMURF1-201ENST00000361125 RMI2Q96E14 147 aa16.29■□□□□ 0.2
SMURF1-201ENST00000361125 MRPL36Q9P0J6 103 aaKnown RBP16.29■□□□□ 0.2
SMURF1-201ENST00000361125 DEFB1P60022 68 aa16.29■□□□□ 0.2
SMURF1-201ENST00000361125 TMEM126AQ9H061 195 aa16.29■□□□□ 0.2
SMURF1-201ENST00000361125 H3BMG7 143 aa16.29■□□□□ 0.2
SMURF1-201ENST00000361125 Q9HAA7 133 aa16.29■□□□□ 0.2
SMURF1-201ENST00000361125 ZGRF1Q86YA3 2104 aa16.28■□□□□ 0.2
SMURF1-201ENST00000361125 TMEM131Q92545 1883 aa16.28■□□□□ 0.2
SMURF1-201ENST00000361125 EDA2RQ9HAV5 297 aa16.28■□□□□ 0.2
SMURF1-201ENST00000361125 SOCS3O14543 225 aa16.28■□□□□ 0.2
SMURF1-201ENST00000361125 P0C879 139 aa16.28■□□□□ 0.2
SMURF1-201ENST00000361125 ESM1Q9NQ30 184 aa16.28■□□□□ 0.2
SMURF1-201ENST00000361125 C2orf70A6NJV1 201 aa16.27■□□□□ 0.2
SMURF1-201ENST00000361125 ZNF295-AS1Q8N0V1 137 aa16.27■□□□□ 0.2
SMURF1-201ENST00000361125 C16orf74Q96GX8 76 aa16.27■□□□□ 0.2
SMURF1-201ENST00000361125 TRAV25A0A0B4J276 109 aa16.27■□□□□ 0.2
SMURF1-201ENST00000361125 C12orf74Q32Q52 190 aa16.27■□□□□ 0.2
SMURF1-201ENST00000361125 LINC01545Q5VT33 79 aa16.27■□□□□ 0.2
SMURF1-201ENST00000361125 PRO1854Q9UHT4 67 aa16.27■□□□□ 0.19
SMURF1-201ENST00000361125 DOCK10Q96BY6 2186 aa16.27■□□□□ 0.19
SMURF1-201ENST00000361125 PPDPFLQ8WWR9 84 aa16.27■□□□□ 0.19
SMURF1-201ENST00000361125 PCNX1Q96RV3 2341 aa16.26■□□□□ 0.19
SMURF1-201ENST00000361125 CRYGCP07315 174 aa16.26■□□□□ 0.19
SMURF1-201ENST00000361125 GYPEP15421 78 aa16.26■□□□□ 0.19
SMURF1-201ENST00000361125 K7EQD1 137 aa16.26■□□□□ 0.19
SMURF1-201ENST00000361125 TRBV12-3P01733 135 aa16.26■□□□□ 0.19
SMURF1-201ENST00000361125 MALRD1Q5VYJ5 2156 aa16.26■□□□□ 0.19
SMURF1-201ENST00000361125 CGB7P0DN87 165 aa16.26■□□□□ 0.19
SMURF1-201ENST00000361125 AMTNQ6UX39 209 aa16.25■□□□□ 0.19
SMURF1-201ENST00000361125 C19orf84I3L1E1 186 aa16.25■□□□□ 0.19
SMURF1-201ENST00000361125 CRLF1O75462 422 aa16.24■□□□□ 0.19
SMURF1-201ENST00000361125 EML6Q6ZMW3 1958 aa16.24■□□□□ 0.19
SMURF1-201ENST00000361125 ANKRD39Q53RE8 183 aa16.24■□□□□ 0.19
SMURF1-201ENST00000361125 C5orf38Q86SI9 138 aa16.24■□□□□ 0.19
SMURF1-201ENST00000361125 Q9H8V8 135 aa16.24■□□□□ 0.19
SMURF1-201ENST00000361125 Q8N1Y9 231 aa16.24■□□□□ 0.19
SMURF1-201ENST00000361125 TRAV13-2A0A0B4J235 113 aa16.23■□□□□ 0.19
SMURF1-201ENST00000361125 PCNX2A6NKB5 2137 aa16.23■□□□□ 0.19
SMURF1-201ENST00000361125 ZFHX2Q9C0A1 2572 aaPredicted RBP16.23■□□□□ 0.19
SMURF1-201ENST00000361125 GAGE12HA6NDE8 117 aa16.22■□□□□ 0.19
SMURF1-201ENST00000361125 FBXL19-AS1Q494R0 122 aa16.22■□□□□ 0.19
SMURF1-201ENST00000361125 IGLV10-54A0A075B6I4 117 aa16.22■□□□□ 0.19
SMURF1-201ENST00000361125 UTF1Q5T230 341 aa16.22■□□□□ 0.19
SMURF1-201ENST00000361125 BRWD1-AS2P59051 145 aa16.22■□□□□ 0.19
SMURF1-201ENST00000361125 PRORYQ9H606 182 aa16.22■□□□□ 0.19
SMURF1-201ENST00000361125 IGHV3-30P01768 117 aa16.21■□□□□ 0.19
SMURF1-201ENST00000361125 IGHV3-33P01772 117 aa16.21■□□□□ 0.19
SMURF1-201ENST00000361125 IGHV3-30-3P0DP02 117 aa16.21■□□□□ 0.19
SMURF1-201ENST00000361125 IGHV3-30-5P0DP03 117 aa16.21■□□□□ 0.19
SMURF1-201ENST00000361125 UNQ9165/PRO28630Q6UXU0 137 aa16.21■□□□□ 0.19
SMURF1-201ENST00000361125 SRCAPQ6ZRS2 3230 aa16.21■□□□□ 0.19
SMURF1-201ENST00000361125 C4orf3Q8WVX3 66 aa16.21■□□□□ 0.19
SMURF1-201ENST00000361125 ZNF503Q96F45 646 aa16.21■□□□□ 0.18
SMURF1-201ENST00000361125 IGHG2P01859 326 aa16.2■□□□□ 0.18
SMURF1-201ENST00000361125 ZFP2Q6ZN57 461 aa16.2■□□□□ 0.18
SMURF1-201ENST00000361125 CITED2Q99967 270 aaPredicted RBP16.2■□□□□ 0.18
SMURF1-201ENST00000361125 MED13Q9UHV7 2174 aa16.2■□□□□ 0.18
SMURF1-201ENST00000361125 C22orf34Q6ZV56 151 aa16.2■□□□□ 0.18
SMURF1-201ENST00000361125 CARD19Q96LW7 228 aa16.2■□□□□ 0.18
SMURF1-201ENST00000361125 DEFB4AO15263 64 aa16.2■□□□□ 0.18
SMURF1-201ENST00000361125 RNF152Q8N8N0 203 aa16.2■□□□□ 0.18
SMURF1-201ENST00000361125 RPL32P62910 135 aaKnown RBP16.19■□□□□ 0.18
SMURF1-201ENST00000361125 C9orf47Q6ZRZ4 202 aa16.19■□□□□ 0.18
SMURF1-201ENST00000361125 SLC25A29Q8N8R3 303 aa16.19■□□□□ 0.18
SMURF1-201ENST00000361125 ATP6V0E2Q8NHE4 81 aa16.19■□□□□ 0.18
SMURF1-201ENST00000361125 K7EMI3 77 aa16.19■□□□□ 0.18
SMURF1-201ENST00000361125 INAFM2P0DMQ5 153 aa16.18■□□□□ 0.18
SMURF1-201ENST00000361125 ICOSQ9Y6W8 199 aa16.18■□□□□ 0.18
SMURF1-201ENST00000361125 DOPEY2Q9Y3R5 2298 aa16.18■□□□□ 0.18
SMURF1-201ENST00000361125 A6NDX4 124 aa16.18■□□□□ 0.18
SMURF1-201ENST00000361125 YPEL4Q96NS1 127 aa16.18■□□□□ 0.18
SMURF1-201ENST00000361125 SPART-AS1P0CW21 52 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms