RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 UBE2D1P51668 147 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 ZNF876PQ49A33 203 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 CYP4F30PQ9H0H9 118 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 TRGV4A0A0C4DH28 118 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 DIRC1Q969H9 104 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 CD164Q04900 197 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 FAM110DQ8TAY7 271 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-203ENST00000357395 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 PLXNA3P51805 1871 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 IGKV1D-8A0A087WSZ0 117 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 ADAMTS9Q9P2N4 1935 aa3.69□□□□□ -1.82
SYNE2-203ENST00000357395 EFNA4P52798 201 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 WDR86Q86TI4 376 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 SND1-IT1Q9HBX3 110 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 ARID2Q68CP9 1835 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 FDCSPQ8NFU4 85 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 DEFB132Q7Z7B7 95 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 TDRG1Q3Y452 100 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 FNDC1Q4ZHG4 1894 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-203ENST00000357395 IGHV1OR15-1A0A075B7D0 117 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 IGHV1-8P0DP01 117 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 LINC00574Q9H8X3 128 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 TMEM89A2RUT3 159 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.68□□□□□ -1.82
SYNE2-203ENST00000357395 JMJD1CQ15652 2540 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 ZSWIM8A7E2V4 1837 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 ZNF80P51504 273 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-203ENST00000357395 PLXNB3Q9ULL4 1909 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 UBR3Q6ZT12 1888 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 TRBV27A0A0K0K1C4 114 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 C19orf71A6NCJ1 209 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 ZNF726P1Q15940 193 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 ANAPC1Q9H1A4 1944 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 PLXNA2O75051 1894 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 A0A1B0GUS0 222 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 RPL28P46779 137 aaKnown RBP3.68□□□□□ -1.82
SYNE2-203ENST00000357395 MCRIP2Q9BUT9 160 aaKnown RBP3.68□□□□□ -1.82
SYNE2-203ENST00000357395 MRGPRG-AS1Q2M3A8 158 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 UBE2E2Q96LR5 201 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 CCL13Q99616 98 aa3.68□□□□□ -1.82
SYNE2-203ENST00000357395 LST1O00453 97 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 FAM19A5Q7Z5A7 132 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-203ENST00000357395 FAM30AQ9NZY2 134 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 SELENOKQ9Y6D0 94 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 ITLN1Q8WWA0 313 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 EXPH5Q8NEV8 1989 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 E9PLN8 166 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 FOXF2Q12947 444 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 C9orf85Q96MD7 179 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 HTN1P15515 57 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 C20orf204Q6ZNR8 217 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 IGKV3-15P01624 115 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 IGHV4-4A0A075B6R2 117 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 IGHV5-10-1A0A0J9YXX1 117 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 ESRGQ1W209 222 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 ALPK3Q96L96 1907 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-203ENST00000357395 OBSL1O75147 1896 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 COX8CQ7Z4L0 72 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 C16orf74Q96GX8 76 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 DHRS4-AS1Q9P1J3 65 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 TIRAPP58753 221 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 SPINK14Q6IE38 97 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 J3QLI3 93 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 SETD2Q9BYW2 2564 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-203ENST00000357395 IGHV3-21A0A0B4J1V1 117 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 PLAC8L1A1L4L8 177 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 ZNF672Q499Z4 452 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-203ENST00000357395 CSRP1P21291 193 aaKnown RBP3.67□□□□□ -1.82
SYNE2-203ENST00000357395 WFDC11Q8NEX6 87 aa3.67□□□□□ -1.82
SYNE2-203ENST00000357395 BUB1B-PAK6H3BSN5 160 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 C14orf177Q52M58 125 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 SERTAD4-AS1Q5TG53 156 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 ZMAT4Q9H898 229 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 Q9H8V8 135 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 LOC285556D6RIA3 1793 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 NRXN2Q9P2S2 1712 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 PMS2CLQ68D20 193 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 NFE4Q86UQ8 179 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 C14orf178Q8N769 122 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-203ENST00000357395 IGKV1D-33P01593 117 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 IGKV1-33P01594 117 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 A6NED7 52 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 KRTAP27-1Q3LI81 207 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 DCTN5Q9BTE1 182 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 C5orf24Q7Z6I8 188 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 ZNF501Q96CX3 271 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-203ENST00000357395 LCTP09848 1927 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 K7EMT4 169 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 NPBQ8NG41 125 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 SPTBN4Q9H254 2564 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 PCDH15Q96QU1 1955 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 C20orf197Q8N268 126 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 ABCA12Q86UK0 2595 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 BEAN1Q3B7T3 259 aa3.66□□□□□ -1.82
SYNE2-203ENST00000357395 SBF1O95248 1867 aa3.65□□□□□ -1.82
SYNE2-203ENST00000357395 DEFB103AP81534 67 aa3.65□□□□□ -1.82
SYNE2-203ENST00000357395 C1orf147Q96MC9 270 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-203ENST00000357395 HIGD2AQ9BW72 106 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms