RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CASC10Q5T4H9 136 aa12.67□□□□□ -0.38
PDLIM7-202ENST00000355841 SMIM12Q96EX1 92 aa12.67□□□□□ -0.38
PDLIM7-202ENST00000355841 NDUFS6O75380 124 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-202ENST00000355841 S100A8P05109 93 aa12.67□□□□□ -0.38
PDLIM7-202ENST00000355841 RAB5AP20339 215 aa12.67□□□□□ -0.38
PDLIM7-202ENST00000355841 S100A12P80511 92 aa12.67□□□□□ -0.38
PDLIM7-202ENST00000355841 A0A087WWC5 75 aa12.66□□□□□ -0.38
PDLIM7-202ENST00000355841 DEFB131BA0A096LNP1 70 aa12.66□□□□□ -0.38
PDLIM7-202ENST00000355841 C3orf84H3BNL1 204 aa12.66□□□□□ -0.38
PDLIM7-202ENST00000355841 S100A4P26447 101 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-202ENST00000355841 ASIPP42127 132 aa12.66□□□□□ -0.38
PDLIM7-202ENST00000355841 LINC00612Q8N6U2 182 aa12.66□□□□□ -0.38
PDLIM7-202ENST00000355841 DAZAP1Q96EP5 407 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-202ENST00000355841 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
PDLIM7-202ENST00000355841 C19orf71A6NCJ1 209 aa12.65□□□□□ -0.38
PDLIM7-202ENST00000355841 C5orf52A6NGY3 159 aa12.65□□□□□ -0.38
PDLIM7-202ENST00000355841 H3BVH4 76 aa12.65□□□□□ -0.38
PDLIM7-202ENST00000355841 CEMP1Q6PRD7 247 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-202ENST00000355841 C9orf85Q96MD7 179 aa12.65□□□□□ -0.38
PDLIM7-202ENST00000355841 C12orf57Q99622 126 aa12.65□□□□□ -0.38
PDLIM7-202ENST00000355841 SPXQ9BT56 116 aa12.65□□□□□ -0.38
PDLIM7-202ENST00000355841 RNASE7Q9H1E1 156 aaKnown RBP12.65□□□□□ -0.38
PDLIM7-202ENST00000355841 S100A6P06703 90 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 ZFP82Q8N141 532 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 TRAV10A0A0B4J240 114 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 M0R2P5 195 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 SMIM6P0DI80 62 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 GZMBP10144 247 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 LINC01551Q86U37 167 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 YPEL4Q96NS1 127 aa12.64□□□□□ -0.39
PDLIM7-202ENST00000355841 NUPR2A6NF83 97 aa12.63□□□□□ -0.39
PDLIM7-202ENST00000355841 P01737 135 aa12.63□□□□□ -0.39
PDLIM7-202ENST00000355841 IGHV3-53P01767 116 aa12.63□□□□□ -0.39
PDLIM7-202ENST00000355841 ARMS2P0C7Q2 107 aa12.63□□□□□ -0.39
PDLIM7-202ENST00000355841 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
PDLIM7-202ENST00000355841 NUDT10Q8NFP7 164 aa12.63□□□□□ -0.39
PDLIM7-202ENST00000355841 NUDT11Q96G61 164 aa12.63□□□□□ -0.39
PDLIM7-202ENST00000355841 ZNF876PQ49A33 203 aa12.62□□□□□ -0.39
PDLIM7-202ENST00000355841 RASL10AQ92737 203 aa12.62□□□□□ -0.39
PDLIM7-202ENST00000355841 IGLL5B9A064 214 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 F5H768 121 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 ATP5G1P05496 136 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 SNRPEP62304 92 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 ISOC2Q96AB3 205 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 IL36BQ9NZH7 164 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 MUC4Q99102 2169 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 MUC21A0A0G2JKD1 596 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 MUC21A0A140T8X8 626 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 DNLZQ5SXM8 178 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 LY96Q9Y6Y9 160 aa12.61□□□□□ -0.39
PDLIM7-202ENST00000355841 DYNC2H1Q8NCM8 4307 aaKnown RBP12.6□□□□□ -0.39
PDLIM7-202ENST00000355841 HOXA5P20719 270 aa12.6□□□□□ -0.39
PDLIM7-202ENST00000355841 SSTP61278 116 aa12.6□□□□□ -0.39
PDLIM7-202ENST00000355841 PNRC1Q12796 327 aaPredicted RBP12.6□□□□□ -0.39
PDLIM7-202ENST00000355841 ERVFC1-1P60608 527 aa12.59□□□□□ -0.39
PDLIM7-202ENST00000355841 RPL23P62829 140 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-202ENST00000355841 ADIRFQ15847 76 aa12.59□□□□□ -0.39
PDLIM7-202ENST00000355841 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
PDLIM7-202ENST00000355841 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
PDLIM7-202ENST00000355841 TPPP3Q9BW30 176 aa12.59□□□□□ -0.39
PDLIM7-202ENST00000355841 NAT8Q9UHE5 227 aa12.59□□□□□ -0.39
PDLIM7-202ENST00000355841 KLK5Q9Y337 293 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-202ENST00000355841 PLECQ15149 4684 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-202ENST00000355841 ZNF479Q96JC4 524 aa12.58□□□□□ -0.4
PDLIM7-202ENST00000355841 RPP21Q9H633 154 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-202ENST00000355841 SCRT2Q9NQ03 307 aa12.58□□□□□ -0.4
PDLIM7-202ENST00000355841 PHLDA3Q9Y5J5 127 aa12.58□□□□□ -0.4
PDLIM7-202ENST00000355841 M0R381 172 aa12.57□□□□□ -0.4
PDLIM7-202ENST00000355841 OR10AG1Q8NH19 301 aa12.57□□□□□ -0.4
PDLIM7-202ENST00000355841 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
PDLIM7-202ENST00000355841 JPT2Q9H910 190 aa12.57□□□□□ -0.4
PDLIM7-202ENST00000355841 IGHV4-4A0A075B6R2 117 aa12.57□□□□□ -0.4
PDLIM7-202ENST00000355841 PCP4L1A6NKN8 68 aa12.57□□□□□ -0.4
PDLIM7-202ENST00000355841 CXCL1P09341 107 aa12.57□□□□□ -0.4
PDLIM7-202ENST00000355841 TMEM242Q9NWH2 141 aa12.57□□□□□ -0.4
PDLIM7-202ENST00000355841 IGHV3-73A0A0B4J1V6 119 aa12.56□□□□□ -0.4
PDLIM7-202ENST00000355841 RPS20P60866 119 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-202ENST00000355841 CTAG1AP78358 180 aa12.56□□□□□ -0.4
PDLIM7-202ENST00000355841 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
PDLIM7-202ENST00000355841 A0A0J9YY99 117 aa12.55□□□□□ -0.4
PDLIM7-202ENST00000355841 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-202ENST00000355841 FABP9Q0Z7S8 132 aa12.55□□□□□ -0.4
PDLIM7-202ENST00000355841 FAM231DQ6ZW35 169 aa12.55□□□□□ -0.4
PDLIM7-202ENST00000355841 TRAV26-1A0A087WT03 109 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 XKRY2A2RUG3 117 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 IGLC6P0CF74 106 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 CFAP126Q5VTH2 177 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 FER1L6-AS1Q8NA97 138 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 PTH2Q96A98 100 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 SSBP4Q9BWG4 385 aaPredicted RBP12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 LYSTQ99698 3801 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 SNAI2O43623 268 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 OR5AL1P0C617 328 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 MED14OSP0DP75 135 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 FHL2Q14192 279 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 ELOBQ15370 118 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms