RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 K7EIM0 57 aa14.04□□□□□ -0.16
COL18A1-202ENST00000355480 MED13LQ71F56 2210 aa14.04□□□□□ -0.16
COL18A1-202ENST00000355480 TSC2P49815 1807 aa14.03□□□□□ -0.16
COL18A1-202ENST00000355480 GATA1P15976 413 aaPredicted RBP14.03□□□□□ -0.16
COL18A1-202ENST00000355480 ETDBQ3ZM63 59 aa14.03□□□□□ -0.16
COL18A1-202ENST00000355480 K7ERJ3 54 aa14.03□□□□□ -0.16
COL18A1-202ENST00000355480 C5orf56Q8N8D9 126 aa14.03□□□□□ -0.16
COL18A1-202ENST00000355480 SPANXA1Q9NS26 97 aa14.03□□□□□ -0.16
COL18A1-202ENST00000355480 IGHV4-4A0A075B6R2 117 aa14.03□□□□□ -0.16
COL18A1-202ENST00000355480 BVES-AS1Q5T3Y7 98 aa14.03□□□□□ -0.16
COL18A1-202ENST00000355480 TRAV4A0A0B4J268 109 aa14.02□□□□□ -0.16
COL18A1-202ENST00000355480 ETDCA0A1B0GVM5 59 aa14.02□□□□□ -0.16
COL18A1-202ENST00000355480 CTSGP08311 255 aa14.02□□□□□ -0.16
COL18A1-202ENST00000355480 ZGRF1Q86YA3 2104 aa14.02□□□□□ -0.16
COL18A1-202ENST00000355480 K7EMI3 77 aa14.02□□□□□ -0.16
COL18A1-202ENST00000355480 PLXNA2O75051 1894 aa14.02□□□□□ -0.17
COL18A1-202ENST00000355480 Q8N9W7 124 aa14.02□□□□□ -0.17
COL18A1-202ENST00000355480 ZNF503Q96F45 646 aa14.02□□□□□ -0.17
COL18A1-202ENST00000355480 NDUFS6O75380 124 aaKnown RBP14.01□□□□□ -0.17
COL18A1-202ENST00000355480 RPL39LQ96EH5 51 aaKnown RBP14.01□□□□□ -0.17
COL18A1-202ENST00000355480 F8W1H4 67 aa14.01□□□□□ -0.17
COL18A1-202ENST00000355480 F8W735 103 aaPredicted RBP14.01□□□□□ -0.17
COL18A1-202ENST00000355480 DAZAP2Q15038 168 aaPredicted RBP14.01□□□□□ -0.17
COL18A1-202ENST00000355480 C16orf54Q6UWD8 224 aa14.01□□□□□ -0.17
COL18A1-202ENST00000355480 SH2D6Q7Z4S9 175 aa14.01□□□□□ -0.17
COL18A1-202ENST00000355480 TIRAPP58753 221 aa14.01□□□□□ -0.17
COL18A1-202ENST00000355480 HERV-K104P63124 156 aa14□□□□□ -0.17
COL18A1-202ENST00000355480 PLXND1Q9Y4D7 1925 aa14□□□□□ -0.17
COL18A1-202ENST00000355480 IGKV1-17P01599 117 aa14□□□□□ -0.17
COL18A1-202ENST00000355480 ZFHX2Q9C0A1 2572 aaPredicted RBP13.99□□□□□ -0.17
COL18A1-202ENST00000355480 K7EP34 96 aa13.99□□□□□ -0.17
COL18A1-202ENST00000355480 FAM208BQ5VWN6 2430 aa13.99□□□□□ -0.17
COL18A1-202ENST00000355480 COX7A2LO14548 114 aa13.99□□□□□ -0.17
COL18A1-202ENST00000355480 C2orf70A6NJV1 201 aa13.99□□□□□ -0.17
COL18A1-202ENST00000355480 TANC1Q9C0D5 1861 aa13.99□□□□□ -0.17
COL18A1-202ENST00000355480 DAZ2Q13117 558 aaKnown RBP13.99□□□□□ -0.17
COL18A1-202ENST00000355480 AMTNQ6UX39 209 aa13.99□□□□□ -0.17
COL18A1-202ENST00000355480 DAZ4Q86SG3 579 aaKnown RBP13.99□□□□□ -0.17
COL18A1-202ENST00000355480 DAZ3Q9NR90 486 aaKnown RBP13.99□□□□□ -0.17
COL18A1-202ENST00000355480 NLRC5Q86WI3 1866 aa13.98□□□□□ -0.17
COL18A1-202ENST00000355480 ZNF747Q9BV97 191 aa13.98□□□□□ -0.17
COL18A1-202ENST00000355480 FRMPD3Q5JV73 1810 aa13.98□□□□□ -0.17
COL18A1-202ENST00000355480 A0A1W2PPM0 123 aa13.98□□□□□ -0.17
COL18A1-202ENST00000355480 ZFP36P26651 326 aaKnown RBP13.98□□□□□ -0.17
COL18A1-202ENST00000355480 KRTAP27-1Q3LI81 207 aa13.98□□□□□ -0.17
COL18A1-202ENST00000355480 C10orf91Q5T1B1 145 aa13.98□□□□□ -0.17
COL18A1-202ENST00000355480 IL15RAQ13261 267 aa13.97□□□□□ -0.17
COL18A1-202ENST00000355480 ORMDL1Q9P0S3 153 aa13.97□□□□□ -0.17
COL18A1-202ENST00000355480 H3BMG7 143 aa13.97□□□□□ -0.17
COL18A1-202ENST00000355480 RNF138Q8WVD3 245 aa13.97□□□□□ -0.17
COL18A1-202ENST00000355480 SHANK1Q9Y566 2161 aa13.97□□□□□ -0.17
COL18A1-202ENST00000355480 MYCNOSP40205 109 aa13.96□□□□□ -0.17
COL18A1-202ENST00000355480 C12orf74Q32Q52 190 aa13.96□□□□□ -0.17
COL18A1-202ENST00000355480 SIVA1O15304 175 aa13.96□□□□□ -0.17
COL18A1-202ENST00000355480 CFC1BP0CG36 223 aa13.96□□□□□ -0.17
COL18A1-202ENST00000355480 CFC1P0CG37 223 aa13.96□□□□□ -0.17
COL18A1-202ENST00000355480 DEFB135Q30KP9 77 aa13.96□□□□□ -0.17
COL18A1-202ENST00000355480 HIST2H2BCQ6DN03 193 aa13.96□□□□□ -0.18
COL18A1-202ENST00000355480 MAJINQ3KP22 176 aa13.95□□□□□ -0.18
COL18A1-202ENST00000355480 DEFB4AO15263 64 aa13.95□□□□□ -0.18
COL18A1-202ENST00000355480 SEM1Q6ZVN7 128 aa13.95□□□□□ -0.18
COL18A1-202ENST00000355480 Q8N1Y9 231 aa13.95□□□□□ -0.18
COL18A1-202ENST00000355480 CITED2Q99967 270 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-202ENST00000355480 HHLA3Q9XRX5 114 aa13.94□□□□□ -0.18
COL18A1-202ENST00000355480 PATE2Q6UY27 113 aa13.94□□□□□ -0.18
COL18A1-202ENST00000355480 CLPSL1A2RUU4 121 aa13.94□□□□□ -0.18
COL18A1-202ENST00000355480 MSRB1Q9NZV6 116 aa13.94□□□□□ -0.18
COL18A1-202ENST00000355480 K7EP13 123 aa13.94□□□□□ -0.18
COL18A1-202ENST00000355480 BAALC-AS2P0C853 105 aa13.94□□□□□ -0.18
COL18A1-202ENST00000355480 ZFP2Q6ZN57 461 aa13.94□□□□□ -0.18
COL18A1-202ENST00000355480 Q8N7P7 452 aa13.94□□□□□ -0.18
COL18A1-202ENST00000355480 TIMM17AQ99595 171 aa13.93□□□□□ -0.18
COL18A1-202ENST00000355480 MED13Q9UHV7 2174 aa13.93□□□□□ -0.18
COL18A1-202ENST00000355480 C4orf3Q8WVX3 66 aa13.93□□□□□ -0.18
COL18A1-202ENST00000355480 DYSFO75923 2080 aa13.93□□□□□ -0.18
COL18A1-202ENST00000355480 SMAD5-AS1Q9Y6J3 95 aa13.93□□□□□ -0.18
COL18A1-202ENST00000355480 NTN5Q8WTR8 489 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-202ENST00000355480 PCNX2A6NKB5 2137 aa13.93□□□□□ -0.18
COL18A1-202ENST00000355480 PRSS47A8MTI9 375 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 MRPL36Q9P0J6 103 aaKnown RBP13.92□□□□□ -0.18
COL18A1-202ENST00000355480 EML6Q6ZMW3 1958 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 NOTCH4Q99466 2003 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 A0A1W2PNU3 283 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-202ENST00000355480 K7EMT4 169 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 RS1O15537 224 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 C15orf53Q8NAA6 179 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 A0A0J9YXV3 536 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 PCP2Q8IVA1 136 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 FUSP35637 526 aaKnown RBP eCLIP13.92□□□□□ -0.186e-6■■■□□ 18
COL18A1-202ENST00000355480 ANAPC1Q9H1A4 1944 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 PRAC2D3DTV9 90 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 ANKRD29Q8N6D5 301 aa13.92□□□□□ -0.18
COL18A1-202ENST00000355480 CRYBA4P53673 196 aa13.91□□□□□ -0.18
COL18A1-202ENST00000355480 SND1-IT1Q9HBX3 110 aa13.91□□□□□ -0.18
COL18A1-202ENST00000355480 MUC6Q6W4X9 2439 aa13.91□□□□□ -0.18
COL18A1-202ENST00000355480 PTPRQQ9UMZ3 2332 aa13.91□□□□□ -0.18
COL18A1-202ENST00000355480 WI2-2373I1.2A0A1W2PRP0 233 aa13.91□□□□□ -0.18
COL18A1-202ENST00000355480 TRACP01848 142 aa13.91□□□□□ -0.18
COL18A1-202ENST00000355480 GPHB5Q86YW7 130 aa13.91□□□□□ -0.18
COL18A1-202ENST00000355480 COX7B2Q8TF08 81 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms