RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 RNASE3P12724 160 aaKnown RBP9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 ATP6V0CP27449 155 aa9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 SUMO1P63165 101 aaKnown RBP9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 SMUG1Q53HV7 270 aa9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 PRNTQ86SH4 94 aa9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 Q8N814 137 aa9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 TMEM70Q9BUB7 260 aa9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 GTSF1LQ9H1H1 148 aa9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 ALG5Q9Y673 324 aa9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 MYCBP2O75592 4640 aa9.65□□□□□ -0.86
PRPF40A-201ENST00000354363 GGTLC3B5MD39 225 aa9.64□□□□□ -0.87
PRPF40A-201ENST00000354363 MGST1P10620 155 aaKnown RBP9.64□□□□□ -0.87
PRPF40A-201ENST00000354363 ZFP69Q49AA0 526 aa9.64□□□□□ -0.87
PRPF40A-201ENST00000354363 ATP6V0E2Q8NHE4 81 aa9.64□□□□□ -0.87
PRPF40A-201ENST00000354363 MBP02144 154 aa9.64□□□□□ -0.87
PRPF40A-201ENST00000354363 SERF2P84101 59 aa9.64□□□□□ -0.87
PRPF40A-201ENST00000354363 CYB561D1Q8N8Q1 229 aa9.64□□□□□ -0.87
PRPF40A-201ENST00000354363 AQP10Q96PS8 301 aa9.64□□□□□ -0.87
PRPF40A-201ENST00000354363 TMEM167BQ9NRX6 74 aa9.64□□□□□ -0.87
PRPF40A-201ENST00000354363 CXorf1O96002 111 aa9.63□□□□□ -0.87
PRPF40A-201ENST00000354363 LAGE3Q14657 143 aa9.63□□□□□ -0.87
PRPF40A-201ENST00000354363 Q6ZSN1 163 aa9.63□□□□□ -0.87
PRPF40A-201ENST00000354363 SH3BGRL3Q9H299 93 aa9.63□□□□□ -0.87
PRPF40A-201ENST00000354363 FAM229AH3BQW9 127 aa9.62□□□□□ -0.87
PRPF40A-201ENST00000354363 SAPCD1Q5SSQ6 148 aa9.62□□□□□ -0.87
PRPF40A-201ENST00000354363 Q8N3U1 123 aa9.62□□□□□ -0.87
PRPF40A-201ENST00000354363 PARLQ9H300 379 aa9.62□□□□□ -0.87
PRPF40A-201ENST00000354363 FAM30AQ9NZY2 134 aa9.62□□□□□ -0.87
PRPF40A-201ENST00000354363 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
PRPF40A-201ENST00000354363 LINC00694P0DN24 101 aa9.61□□□□□ -0.87
PRPF40A-201ENST00000354363 LINC00479Q96M42 142 aa9.61□□□□□ -0.87
PRPF40A-201ENST00000354363 ACTR3CQ9C0K3 210 aaPredicted RBP9.61□□□□□ -0.87
PRPF40A-201ENST00000354363 TNFSF18Q9UNG2 199 aa9.61□□□□□ -0.87
PRPF40A-201ENST00000354363 SRRM2Q9UQ35 2752 aaKnown RBP9.61□□□□□ -0.87
PRPF40A-201ENST00000354363 TRAV34A0A0B4J273 112 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 A0A1W2PRE2 83 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 A8MWV9 139 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 WFDC2Q14508 124 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 ZFP2Q6ZN57 461 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 TM2D2Q9BX73 214 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 GAGE12JA6NER3 117 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 S100A4P26447 101 aaKnown RBP9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 GAGE1Q13065 139 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 GAGE4Q13068 117 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 GAGE5Q13069 117 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 GAGE13Q4V321 117 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 Q5BKY6 102 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 PIK3CD-AS1Q5SR53 167 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 JPT2Q9H910 190 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 ARL2-SNX15V9GYD0 113 aa9.6□□□□□ -0.87
PRPF40A-201ENST00000354363 FABP5P3A8MUU1 101 aa9.59□□□□□ -0.87
PRPF40A-201ENST00000354363 C1QBP02746 253 aa9.59□□□□□ -0.87
PRPF40A-201ENST00000354363 LGALSLQ3ZCW2 172 aaPredicted RBP9.59□□□□□ -0.87
PRPF40A-201ENST00000354363 UFSP1Q6NVU6 142 aa9.59□□□□□ -0.87
PRPF40A-201ENST00000354363 MED28Q9H204 178 aa9.59□□□□□ -0.87
PRPF40A-201ENST00000354363 Q9UF83 564 aa9.59□□□□□ -0.87
PRPF40A-201ENST00000354363 ASIPP42127 132 aa9.58□□□□□ -0.88
PRPF40A-201ENST00000354363 ZNF726P1Q15940 193 aa9.58□□□□□ -0.88
PRPF40A-201ENST00000354363 DAZ4Q86SG3 579 aaKnown RBP9.58□□□□□ -0.88
PRPF40A-201ENST00000354363 OR2T35Q8NGX2 323 aa9.58□□□□□ -0.88
PRPF40A-201ENST00000354363 SAMD10Q9BYL1 202 aa9.58□□□□□ -0.88
PRPF40A-201ENST00000354363 DAZ3Q9NR90 486 aaKnown RBP9.58□□□□□ -0.88
PRPF40A-201ENST00000354363 RPL7L1Q6DKI1 246 aaKnown RBP9.57□□□□□ -0.88
PRPF40A-201ENST00000354363 C14orf178Q8N769 122 aaPredicted RBP9.57□□□□□ -0.88
PRPF40A-201ENST00000354363 IL36BQ9NZH7 164 aa9.57□□□□□ -0.88
PRPF40A-201ENST00000354363 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 CTXND1A0A1B0GTU2 59 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 PEX7O00628 323 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 IFNA7P01567 189 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 UBE2G2P60604 165 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 Q86TA4 180 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 RNF222A6NCQ9 220 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 B4DEV8 164 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 H3BVH4 76 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 LECT2O14960 151 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 GIPP09681 153 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 FGF8P55075 233 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 DNLZQ5SXM8 178 aa9.56□□□□□ -0.88
PRPF40A-201ENST00000354363 A0A087WWC5 75 aa9.55□□□□□ -0.88
PRPF40A-201ENST00000354363 BORCS7-ASMTA0A0B4J1R7 106 aa9.55□□□□□ -0.88
PRPF40A-201ENST00000354363 KRBOX1C9JBD0 128 aa9.55□□□□□ -0.88
PRPF40A-201ENST00000354363 PTTG1O95997 202 aa9.55□□□□□ -0.88
PRPF40A-201ENST00000354363 CRIP1P50238 77 aa9.55□□□□□ -0.88
PRPF40A-201ENST00000354363 TOR2AQ5JU69 321 aa9.55□□□□□ -0.88
PRPF40A-201ENST00000354363 Q6ZSA8 131 aa9.55□□□□□ -0.88
PRPF40A-201ENST00000354363 INO80EQ8NBZ0 244 aaPredicted RBP9.55□□□□□ -0.88
PRPF40A-201ENST00000354363 ZC2HC1AQ96GY0 325 aa9.55□□□□□ -0.88
PRPF40A-201ENST00000354363 FAM74A7A6NL05 159 aa9.54□□□□□ -0.88
PRPF40A-201ENST00000354363 RHODO00212 210 aa9.54□□□□□ -0.88
PRPF40A-201ENST00000354363 ARMS2P0C7Q2 107 aa9.54□□□□□ -0.88
PRPF40A-201ENST00000354363 HIST1H2BAQ96A08 127 aa9.54□□□□□ -0.88
PRPF40A-201ENST00000354363 NKX6-2Q9C056 277 aaPredicted RBP9.54□□□□□ -0.88
PRPF40A-201ENST00000354363 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 FXYD6-FXYD2A0A087WZ82 144 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 M0R036 132 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 COX8CQ7Z4L0 72 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 SYT8Q8NBV8 401 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 OR11H4Q8NGC9 324 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms