RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 STATHP02808 62 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 CCL3P10147 92 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 IAPPP10997 89 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 PIPP12273 146 aaPredicted RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 FGF12P61328 243 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SNRPGP62308 76 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 UBE2L3P68036 154 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 HOXC5Q00444 222 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SMIM21Q3B7S5 101 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LGALS9BQ3B8N2 356 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LGALSLQ3ZCW2 172 aaPredicted RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 NCBP2-AS2Q69YL0 99 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LGALS9CQ6DKI2 356 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 GLIPR1L1Q6UWM5 242 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 GKN2Q86XP6 184 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 C9orf62Q8N4C0 152 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 OR10J5Q8NHC4 309 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SMIM4Q8WVI0 70 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BAQ96A08 127 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MIEN1Q9BRT3 115 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MANBALQ9NQG1 85 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 CACFD1Q9UGQ2 172 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LAMTOR2Q9Y2Q5 125 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LSM2Q9Y333 95 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 TIMM9Q9Y5J7 89 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 WNK1Q9H4A3 2382 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV27A0A087WT01 109 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV26-2A0A0B4J265 109 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 UBE2L5PA0A1B0GUS4 154 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 DPRXA6NFQ7 191 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 IFITM5A6NNB3 132 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 H3BUT2 72 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 GSTZ1O43708 216 aaPredicted RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 NDUFB6O95139 128 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 LEPROTL1O95214 131 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 DNAL4O96015 105 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 CD79AP11912 226 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 GNG5P63218 68 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 ERHP84090 104 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF141Q15928 474 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 RTL8BQ17RB0 113 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 KHDC3LQ587J8 217 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 OR5AS1Q8N127 324 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 ANKRD29Q8N6D5 301 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C5orf17Q8NAS9 161 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C1orf64Q8NEQ6 169 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 OR5A1Q8NGJ0 315 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 OR5C1Q8NGR4 320 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 MUC7Q8TAX7 377 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 KLF14Q8TD94 323 aaPredicted RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM222Q9H0R3 208 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C11orf1Q9H5F2 150 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 PRTFDC1Q9NRG1 225 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 MRPL16Q9NX20 251 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 ICE1Q9Y2F5 2266 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 KNTC1P50748 2209 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 SPAG17Q6Q759 2223 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 SDK2Q58EX2 2172 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 A0A1W2PRS3 328 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM189A5PLL7 270 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 APOMO95445 188 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 HMGN2P05204 90 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 SPINK8P0C7L1 97 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 TRGC1P0CF51 173 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 MPC1LP0DKB6 136 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H1BP16401 226 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 PCBD1P61457 104 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 DHRS2Q13268 280 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 EIF3IQ13347 325 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 EDDM3AQ14507 147 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 NNATQ16517 81 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 KRTAP6-3Q3LI67 103 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 DEFB134Q4QY38 66 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 COMMD6Q7Z4G1 85 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C1orf158Q8N1D5 194 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM229BQ8NBD8 167 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C14orf144Q96I85 54 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF714Q96N38 554 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 MGST2Q99735 147 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C20orf27Q9GZN8 174 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 MCTS1Q9ULC4 181 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 MGAM2Q2M2H8 2515 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 RTTNQ86VV8 2226 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 MYH7BA7E2Y1 1941 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 DOCK5Q9H7D0 1870 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 HEATR5AQ86XA9 2040 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 hADV38S2A0JD32 116 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C7orf71A4D174 169 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF860A6NHJ4 632 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 OR11H12B2RN74 326 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 LYZL6O75951 148 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 LY6HO94772 140 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 NDUFC2O95298 119 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 IGF2P01344 180 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 NMBP08949 121 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 RPS4Y1P22090 263 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 OPRM1P35372 400 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 FOXA1P55317 472 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 EDDM3BP56851 147 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms