RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SPRNQ5BIV9 151 aa17.94■□□□□ 0.46
NPAS3-201ENST00000346562 Q8NFD4 153 aa17.94■□□□□ 0.46
NPAS3-201ENST00000346562 C2orf70A6NJV1 201 aa17.94■□□□□ 0.46
NPAS3-201ENST00000346562 ADORA2A-AS1P86434 159 aa17.94■□□□□ 0.46
NPAS3-201ENST00000346562 IGHG2P01859 326 aa17.93■□□□□ 0.46
NPAS3-201ENST00000346562 WT1P19544 449 aaPredicted RBP17.93■□□□□ 0.46
NPAS3-201ENST00000346562 K7EIM0 57 aa17.93■□□□□ 0.46
NPAS3-201ENST00000346562 OPRPNQ99935 248 aaPredicted RBP17.93■□□□□ 0.46
NPAS3-201ENST00000346562 SMAD5-AS1Q9Y6J3 95 aa17.93■□□□□ 0.46
NPAS3-201ENST00000346562 IGHV4-28A0A0C4DH34 117 aa17.93■□□□□ 0.46
NPAS3-201ENST00000346562 PLXNA4Q9HCM2 1894 aa17.93■□□□□ 0.46
NPAS3-201ENST00000346562 WDR81Q562E7 1941 aa17.93■□□□□ 0.46
NPAS3-201ENST00000346562 K7EMT4 169 aa17.92■□□□□ 0.46
NPAS3-201ENST00000346562 CXCL5P42830 114 aa17.92■□□□□ 0.46
NPAS3-201ENST00000346562 VSIG2Q96IQ7 327 aa17.92■□□□□ 0.46
NPAS3-201ENST00000346562 FANCD2OSQ96PS1 177 aa17.92■□□□□ 0.46
NPAS3-201ENST00000346562 RTTNQ86VV8 2226 aa17.92■□□□□ 0.46
NPAS3-201ENST00000346562 Q6ZVH6 145 aa17.92■□□□□ 0.46
NPAS3-201ENST00000346562 YLPM1P49750 1951 aaKnown RBP17.92■□□□□ 0.46
NPAS3-201ENST00000346562 MYO7BQ6PIF6 2116 aa17.92■□□□□ 0.46
NPAS3-201ENST00000346562 CLPSL1A2RUU4 121 aa17.92■□□□□ 0.46
NPAS3-201ENST00000346562 CTSGP08311 255 aa17.91■□□□□ 0.46
NPAS3-201ENST00000346562 RBM3P98179 157 aaKnown RBP17.91■□□□□ 0.46
NPAS3-201ENST00000346562 TCF20Q9UGU0 1960 aaKnown RBP17.91■□□□□ 0.46
NPAS3-201ENST00000346562 MP68P56378 58 aa17.9■□□□□ 0.46
NPAS3-201ENST00000346562 Q8N9W7 124 aa17.9■□□□□ 0.46
NPAS3-201ENST00000346562 NCR3O14931 201 aa17.9■□□□□ 0.46
NPAS3-201ENST00000346562 SPRY2O43597 315 aa17.9■□□□□ 0.46
NPAS3-201ENST00000346562 GATA1P15976 413 aaPredicted RBP17.9■□□□□ 0.46
NPAS3-201ENST00000346562 ALPK2Q86TB3 2170 aa17.9■□□□□ 0.46
NPAS3-201ENST00000346562 ESM1Q9NQ30 184 aa17.9■□□□□ 0.46
NPAS3-201ENST00000346562 TRBV7-3A0A075B6L6 115 aa17.9■□□□□ 0.46
NPAS3-201ENST00000346562 GAGE12HA6NDE8 117 aa17.89■□□□□ 0.46
NPAS3-201ENST00000346562 RITA1Q96K30 269 aa17.89■□□□□ 0.45
NPAS3-201ENST00000346562 IGLL5B9A064 214 aa17.89■□□□□ 0.45
NPAS3-201ENST00000346562 CACNA1EQ15878 2313 aa17.88■□□□□ 0.45
NPAS3-201ENST00000346562 KRTAP27-1Q3LI81 207 aa17.88■□□□□ 0.45
NPAS3-201ENST00000346562 INSL3P51460 131 aa17.88■□□□□ 0.45
NPAS3-201ENST00000346562 MGAMO43451 1857 aa17.88■□□□□ 0.45
NPAS3-201ENST00000346562 WI2-2373I1.2A0A1W2PRP0 233 aa17.87■□□□□ 0.45
NPAS3-201ENST00000346562 DEFB135Q30KP9 77 aa17.87■□□□□ 0.45
NPAS3-201ENST00000346562 GPHB5Q86YW7 130 aa17.87■□□□□ 0.45
NPAS3-201ENST00000346562 Q8N1Y9 231 aa17.87■□□□□ 0.45
NPAS3-201ENST00000346562 MED14OSP0DP75 135 aa17.86■□□□□ 0.45
NPAS3-201ENST00000346562 NRGNQ92686 78 aa17.86■□□□□ 0.45
NPAS3-201ENST00000346562 NREPQ16612 68 aa17.86■□□□□ 0.45
NPAS3-201ENST00000346562 RS1O15537 224 aa17.85■□□□□ 0.45
NPAS3-201ENST00000346562 FANCMQ8IYD8 2048 aa17.85■□□□□ 0.45
NPAS3-201ENST00000346562 MUSTN1Q8IVN3 82 aa17.85■□□□□ 0.45
NPAS3-201ENST00000346562 PTPRDP23468 1912 aa17.85■□□□□ 0.45
NPAS3-201ENST00000346562 A0A0J9YXV3 536 aa17.84■□□□□ 0.45
NPAS3-201ENST00000346562 C5orf47Q569G3 176 aa17.84■□□□□ 0.45
NPAS3-201ENST00000346562 A0A1B0GX51 115 aa17.84■□□□□ 0.45
NPAS3-201ENST00000346562 HEATR1Q9H583 2144 aaKnown RBP17.83■□□□□ 0.44
NPAS3-201ENST00000346562 TSC2P49815 1807 aa17.83■□□□□ 0.44
NPAS3-201ENST00000346562 MAJINQ3KP22 176 aa17.83■□□□□ 0.44
NPAS3-201ENST00000346562 PCP2Q8IVA1 136 aa17.82■□□□□ 0.44
NPAS3-201ENST00000346562 WFDC9Q8NEX5 89 aa17.82■□□□□ 0.44
NPAS3-201ENST00000346562 C14orf177Q52M58 125 aa17.82■□□□□ 0.44
NPAS3-201ENST00000346562 IGKV1-17P01599 117 aa17.82■□□□□ 0.44
NPAS3-201ENST00000346562 SPAG11BQ08648 103 aa17.82■□□□□ 0.44
NPAS3-201ENST00000346562 B9D2Q9BPU9 175 aa17.82■□□□□ 0.44
NPAS3-201ENST00000346562 PLXNA2O75051 1894 aa17.82■□□□□ 0.44
NPAS3-201ENST00000346562 CACNA1DQ01668 2161 aa17.82■□□□□ 0.44
NPAS3-201ENST00000346562 DIRC1Q969H9 104 aa17.81■□□□□ 0.44
NPAS3-201ENST00000346562 FGF23Q9GZV9 251 aaPredicted RBP17.8■□□□□ 0.44
NPAS3-201ENST00000346562 CEP290O15078 2479 aa17.8■□□□□ 0.44
NPAS3-201ENST00000346562 A0A0B4J2C4 111 aa17.8■□□□□ 0.44
NPAS3-201ENST00000346562 TP53BP1Q12888 1972 aaPredicted RBP17.8■□□□□ 0.44
NPAS3-201ENST00000346562 TANC1Q9C0D5 1861 aa17.8■□□□□ 0.44
NPAS3-201ENST00000346562 RNF138Q8WVD3 245 aa17.8■□□□□ 0.44
NPAS3-201ENST00000346562 ZFP36P26651 326 aaKnown RBP17.79■□□□□ 0.44
NPAS3-201ENST00000346562 TOMM6Q96B49 74 aa17.79■□□□□ 0.44
NPAS3-201ENST00000346562 DEFB4AO15263 64 aa17.79■□□□□ 0.44
NPAS3-201ENST00000346562 TMEM263Q8WUH6 116 aaKnown RBP17.79■□□□□ 0.44
NPAS3-201ENST00000346562 SEM1Q6ZVN7 128 aa17.79■□□□□ 0.44
NPAS3-201ENST00000346562 PATE2Q6UY27 113 aa17.78■□□□□ 0.44
NPAS3-201ENST00000346562 KLK12Q9UKR0 248 aa17.78■□□□□ 0.44
NPAS3-201ENST00000346562 FRMPD3Q5JV73 1810 aa17.78■□□□□ 0.44
NPAS3-201ENST00000346562 FER1L5A0AVI2 2057 aa17.77■□□□□ 0.44
NPAS3-201ENST00000346562 TEX22C9J3V5 150 aa17.77■□□□□ 0.44
NPAS3-201ENST00000346562 Q8N7P7 452 aa17.76■□□□□ 0.43
NPAS3-201ENST00000346562 NPSP0C0P6 89 aa17.76■□□□□ 0.43
NPAS3-201ENST00000346562 SIRPDQ9H106 197 aa17.76■□□□□ 0.43
NPAS3-201ENST00000346562 JMJD7-PLA2G4BH0Y9G9 81 aa17.76■□□□□ 0.43
NPAS3-201ENST00000346562 MSRB1Q9NZV6 116 aa17.76■□□□□ 0.43
NPAS3-201ENST00000346562 DNAJC9-AS1A6NH13 148 aa17.76■□□□□ 0.43
NPAS3-201ENST00000346562 NDUFA11Q86Y39 141 aa17.76■□□□□ 0.43
NPAS3-201ENST00000346562 PHF3Q92576 2039 aaKnown RBP17.75■□□□□ 0.43
NPAS3-201ENST00000346562 LYPD6BQ8NI32 183 aa17.75■□□□□ 0.43
NPAS3-201ENST00000346562 A4D1N5 150 aa17.75■□□□□ 0.43
NPAS3-201ENST00000346562 PSMB8P28062 276 aa17.75■□□□□ 0.43
NPAS3-201ENST00000346562 BAALCQ8WXS3 180 aa17.75■□□□□ 0.43
NPAS3-201ENST00000346562 PRO0255Q9UI72 69 aa17.75■□□□□ 0.43
NPAS3-201ENST00000346562 PRAC2D3DTV9 90 aa17.74■□□□□ 0.43
NPAS3-201ENST00000346562 A6NDX4 124 aa17.74■□□□□ 0.43
NPAS3-201ENST00000346562 C11orf45Q8TAV5 145 aa17.74■□□□□ 0.43
NPAS3-201ENST00000346562 RPL39P62891 51 aaKnown RBP17.74■□□□□ 0.43
NPAS3-201ENST00000346562 C14orf132Q9NPU4 83 aa17.73■□□□□ 0.43
NPAS3-201ENST00000346562 LRRC75A-AS1Q8N1F1 130 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms