RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 C4orf3Q8WVX3 66 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 FANCD2OSQ96PS1 177 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 EIF4EBP1Q13541 118 aaPredicted RBP9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 Q6ZVH6 145 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.92□□□□□ -0.827e-11■□□□□ 10.9
SH3PXD2A-201ENST00000315994 C2orf70A6NJV1 201 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 LGALS9BQ3B8N2 356 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 LGALS9CQ6DKI2 356 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 EML6Q6ZMW3 1958 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 IGHV3-38A0A0C4DH36 116 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 GAGE2BQ13066 116 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 APRG1Q8IVJ8 170 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 C9orf118A6NHY6 69 aa9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 KLF5Q13887 457 aaPredicted RBP9.92□□□□□ -0.82
SH3PXD2A-201ENST00000315994 UTF1Q5T230 341 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 ZNF493Q6ZR52 646 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 NEGR1Q7Z3B1 354 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 ZNF843Q8N446 348 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 NKAPP1Q8N9T2 125 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 COL5A1P20908 1838 aaPredicted RBP9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 LEPROTO15243 131 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 HLA-DRB4P13762 266 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 HLA-DRB4X5D2U9 266 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 K7EMI3 77 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 K7EP34 96 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 IGLL1P15814 213 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 U3KQE9 123 aa9.91□□□□□ -0.82
SH3PXD2A-201ENST00000315994 C9orf47Q6ZRZ4 202 aa9.9□□□□□ -0.82
SH3PXD2A-201ENST00000315994 NOP10Q9NPE3 64 aaKnown RBP9.9□□□□□ -0.82
SH3PXD2A-201ENST00000315994 KLF12Q9Y4X4 402 aa9.9□□□□□ -0.82
SH3PXD2A-201ENST00000315994 TRAV25A0A0B4J276 109 aa9.9□□□□□ -0.82
SH3PXD2A-201ENST00000315994 MYCNOSP40205 109 aa9.9□□□□□ -0.82
SH3PXD2A-201ENST00000315994 RHOHQ15669 191 aa9.9□□□□□ -0.82
SH3PXD2A-201ENST00000315994 IL17DQ8TAD2 202 aa9.9□□□□□ -0.82
SH3PXD2A-201ENST00000315994 C1orf229Q6ZS94 237 aaPredicted RBP9.9□□□□□ -0.82
SH3PXD2A-201ENST00000315994 KLK5Q9Y337 293 aaPredicted RBP9.9□□□□□ -0.82
SH3PXD2A-201ENST00000315994 MED12LQ86YW9 2145 aa9.9□□□□□ -0.83
SH3PXD2A-201ENST00000315994 IGHV4-31P0DP07 118 aa9.89□□□□□ -0.83
SH3PXD2A-201ENST00000315994 ATXN8Q156A1 80 aa9.89□□□□□ -0.83
SH3PXD2A-201ENST00000315994 IGKV1D-37A0A075B6S9 117 aa9.89□□□□□ -0.83
SH3PXD2A-201ENST00000315994 GATD1Q8NB37 220 aa9.89□□□□□ -0.83
SH3PXD2A-201ENST00000315994 CLPSL1A2RUU4 121 aa9.89□□□□□ -0.83
SH3PXD2A-201ENST00000315994 GAGE6Q13070 117 aa9.89□□□□□ -0.83
SH3PXD2A-201ENST00000315994 BVES-AS1Q5T3Y7 98 aa9.89□□□□□ -0.83
SH3PXD2A-201ENST00000315994 TRBV6-1A0A0K0K1D8 114 aa9.89□□□□□ -0.83
SH3PXD2A-201ENST00000315994 FAM208BQ5VWN6 2430 aa9.88□□□□□ -0.83
SH3PXD2A-201ENST00000315994 GAGE12HA6NDE8 117 aa9.88□□□□□ -0.83
SH3PXD2A-201ENST00000315994 DNAJC9-AS1A6NH13 148 aa9.88□□□□□ -0.83
SH3PXD2A-201ENST00000315994 PIFOQ8TCI5 191 aa9.88□□□□□ -0.83
SH3PXD2A-201ENST00000315994 C16orf74Q96GX8 76 aa9.88□□□□□ -0.83
SH3PXD2A-201ENST00000315994 LY6LH3BQJ8 138 aa9.88□□□□□ -0.83
SH3PXD2A-201ENST00000315994 PRSS47A8MTI9 375 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 PRAC2D3DTV9 90 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 MED13LQ71F56 2210 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 F8VRH5 84 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 CCL18P55774 89 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 IGF1P05019 195 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 CRYGBP07316 175 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 Q6YL49 198 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 EBI3Q14213 229 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 CCDC140Q96MF4 163 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 TDRG1Q3Y452 100 aa9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 ANKHD1Q8IWZ3 2542 aaKnown RBP9.87□□□□□ -0.83
SH3PXD2A-201ENST00000315994 IGHG4P01861 327 aa9.86□□□□□ -0.83
SH3PXD2A-201ENST00000315994 CITED1Q99966 193 aa9.86□□□□□ -0.83
SH3PXD2A-201ENST00000315994 LAMTOR3Q9UHA4 124 aa9.86□□□□□ -0.83
SH3PXD2A-201ENST00000315994 TRBV12-3P01733 135 aa9.86□□□□□ -0.83
SH3PXD2A-201ENST00000315994 UNQ9165/PRO28630Q6UXU0 137 aa9.86□□□□□ -0.83
SH3PXD2A-201ENST00000315994 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
SH3PXD2A-201ENST00000315994 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
SH3PXD2A-201ENST00000315994 TNRC6AQ8NDV7 1962 aaKnown RBP9.85□□□□□ -0.83
SH3PXD2A-201ENST00000315994 SPART-AS1P0CW21 52 aa9.85□□□□□ -0.83
SH3PXD2A-201ENST00000315994 HERVK_113P63121 156 aa9.85□□□□□ -0.83
SH3PXD2A-201ENST00000315994 ZNF295-AS1Q8N0V1 137 aa9.85□□□□□ -0.83
SH3PXD2A-201ENST00000315994 SRCAPQ6ZRS2 3230 aa9.85□□□□□ -0.83
SH3PXD2A-201ENST00000315994 DEFB125Q8N687 156 aa9.85□□□□□ -0.83
SH3PXD2A-201ENST00000315994 CITED2Q99967 270 aaPredicted RBP9.85□□□□□ -0.83
SH3PXD2A-201ENST00000315994 IGKV2D-24A0A075B6R9 120 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 TRAV8-4A0A0B4J246 113 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 VWC2LB2RUY7 222 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 MED14OSP0DP75 135 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 SPANXA1Q9NS26 97 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 LINC01548A6NM66 108 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 SUMO4Q6EEV6 95 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 SMAD5-AS1Q9Y6J3 95 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 ANGP03950 147 aaKnown RBP9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 COX8AP10176 69 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 A0A096LPF7 62 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 ZNF503Q96F45 646 aa9.84□□□□□ -0.83
SH3PXD2A-201ENST00000315994 F8W1H4 67 aa9.83□□□□□ -0.84
SH3PXD2A-201ENST00000315994 NUPR1O60356 82 aa9.83□□□□□ -0.84
SH3PXD2A-201ENST00000315994 ZNF747Q9BV97 191 aa9.83□□□□□ -0.84
SH3PXD2A-201ENST00000315994 A0A1W2PPM0 123 aa9.83□□□□□ -0.84
SH3PXD2A-201ENST00000315994 WFDC11Q8NEX6 87 aa9.83□□□□□ -0.84
SH3PXD2A-201ENST00000315994 GTSF1Q8WW33 167 aa9.83□□□□□ -0.84
SH3PXD2A-201ENST00000315994 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms