RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 Q8N2B8 174 aa14.41□□□□□ -0.1
BRAF-201ENST00000288602 C18orf15Q96N68 181 aa14.41□□□□□ -0.1
BRAF-201ENST00000288602 KLLNB2CW77 178 aa14.41□□□□□ -0.1
BRAF-201ENST00000288602 K7EQG2 157 aa14.41□□□□□ -0.1
BRAF-201ENST00000288602 LGALS9O00182 355 aa14.41□□□□□ -0.1
BRAF-201ENST00000288602 CACNG7P62955 275 aa14.41□□□□□ -0.1
BRAF-201ENST00000288602 LINC01545Q5VT33 79 aa14.41□□□□□ -0.1
BRAF-201ENST00000288602 C14orf178Q8N769 122 aaPredicted RBP14.41□□□□□ -0.1
BRAF-201ENST00000288602 OR11H1Q8NG94 326 aa14.41□□□□□ -0.1
BRAF-201ENST00000288602 OR2K2Q8NGT1 345 aa14.41□□□□□ -0.1
BRAF-201ENST00000288602 MUC4Q99102 2169 aa14.4□□□□□ -0.1
BRAF-201ENST00000288602 J3QKU1 62 aa14.4□□□□□ -0.1
BRAF-201ENST00000288602 SNRPD3P62318 126 aaKnown RBP14.4□□□□□ -0.1
BRAF-201ENST00000288602 LEPP41159 167 aa14.4□□□□□ -0.1
BRAF-201ENST00000288602 SETD2Q9BYW2 2564 aaPredicted RBP14.39□□□□□ -0.11
BRAF-201ENST00000288602 C11orf44Q8N8P7 122 aa14.39□□□□□ -0.11
BRAF-201ENST00000288602 NRACQ8N912 160 aa14.39□□□□□ -0.11
BRAF-201ENST00000288602 Q6ZVH6 145 aa14.39□□□□□ -0.11
BRAF-201ENST00000288602 A0A0J9YX75 114 aa14.38□□□□□ -0.11
BRAF-201ENST00000288602 HINT1P49773 126 aaPredicted RBP14.38□□□□□ -0.11
BRAF-201ENST00000288602 DNAJC9-AS1A6NH13 148 aa14.38□□□□□ -0.11
BRAF-201ENST00000288602 TSPOP30536 169 aa14.38□□□□□ -0.11
BRAF-201ENST00000288602 FAM159AQ6UWV7 190 aa14.38□□□□□ -0.11
BRAF-201ENST00000288602 Q6ZSV7 163 aa14.38□□□□□ -0.11
BRAF-201ENST00000288602 MTORP42345 2549 aa14.37□□□□□ -0.11
BRAF-201ENST00000288602 TRBV7-9A0A0J9YWB2 115 aa14.37□□□□□ -0.11
BRAF-201ENST00000288602 CCL25O15444 150 aa14.37□□□□□ -0.11
BRAF-201ENST00000288602 PTTG1IPP53801 180 aa14.37□□□□□ -0.11
BRAF-201ENST00000288602 TCTAP57738 103 aa14.37□□□□□ -0.11
BRAF-201ENST00000288602 ESM1Q9NQ30 184 aa14.37□□□□□ -0.11
BRAF-201ENST00000288602 SPINK13Q1W4C9 94 aa14.37□□□□□ -0.11
BRAF-201ENST00000288602 SAMD13Q5VXD3 122 aa14.37□□□□□ -0.11
BRAF-201ENST00000288602 NXT2Q9NPJ8 142 aaKnown RBP14.37□□□□□ -0.11
BRAF-201ENST00000288602 IGLV2-18A0A075B6J9 118 aa14.36□□□□□ -0.11
BRAF-201ENST00000288602 IFI27L1Q96BM0 104 aa14.36□□□□□ -0.11
BRAF-201ENST00000288602 SCRT2Q9NQ03 307 aa14.36□□□□□ -0.11
BRAF-201ENST00000288602 LINC01619G3V211 115 aa14.36□□□□□ -0.11
BRAF-201ENST00000288602 MGPP08493 103 aa14.36□□□□□ -0.11
BRAF-201ENST00000288602 CD7P09564 240 aa14.36□□□□□ -0.11
BRAF-201ENST00000288602 KLHL30-AS1Q8NEE0 82 aa14.36□□□□□ -0.11
BRAF-201ENST00000288602 ORAOV1Q8WV07 137 aa14.36□□□□□ -0.11
BRAF-201ENST00000288602 UNC79Q9P2D8 2635 aa14.35□□□□□ -0.11
BRAF-201ENST00000288602 WNK1Q9H4A3 2382 aa14.35□□□□□ -0.11
BRAF-201ENST00000288602 HSBP1L1C9JCN9 74 aa14.35□□□□□ -0.11
BRAF-201ENST00000288602 Q8N8P6 123 aa14.35□□□□□ -0.11
BRAF-201ENST00000288602 TMEM158Q8WZ71 300 aa14.35□□□□□ -0.11
BRAF-201ENST00000288602 JPT2Q9H910 190 aa14.35□□□□□ -0.11
BRAF-201ENST00000288602 C7orf71A4D174 169 aa14.35□□□□□ -0.11
BRAF-201ENST00000288602 DPF1Q92782 380 aa14.35□□□□□ -0.11
BRAF-201ENST00000288602 RPL39LQ96EH5 51 aaKnown RBP14.35□□□□□ -0.11
BRAF-201ENST00000288602 RNASE8Q8TDE3 154 aaKnown RBP14.34□□□□□ -0.11
BRAF-201ENST00000288602 DLX4Q92988 240 aaPredicted RBP14.34□□□□□ -0.11
BRAF-201ENST00000288602 ST20Q9HBF5 79 aa14.34□□□□□ -0.11
BRAF-201ENST00000288602 FCER1GP30273 86 aa14.34□□□□□ -0.11
BRAF-201ENST00000288602 KRTAP1-1Q07627 177 aa14.34□□□□□ -0.11
BRAF-201ENST00000288602 OR1N2Q8NGR9 330 aa14.34□□□□□ -0.11
BRAF-201ENST00000288602 LINC01546A6NGU7 62 aa14.33□□□□□ -0.12
BRAF-201ENST00000288602 C4orf3Q8WVX3 66 aa14.33□□□□□ -0.12
BRAF-201ENST00000288602 DPH3P1Q9H4G8 78 aa14.33□□□□□ -0.12
BRAF-201ENST00000288602 YAE1D1Q9NRH1 226 aa14.33□□□□□ -0.12
BRAF-201ENST00000288602 A0A1W2PRX2 142 aa14.33□□□□□ -0.12
BRAF-201ENST00000288602 KNCNA6PVL3 124 aa14.33□□□□□ -0.12
BRAF-201ENST00000288602 CD5LO43866 347 aa14.33□□□□□ -0.12
BRAF-201ENST00000288602 RASL10AQ92737 203 aa14.33□□□□□ -0.12
BRAF-201ENST00000288602 GCN1Q92616 2671 aaKnown RBP14.32□□□□□ -0.12
BRAF-201ENST00000288602 OR9G4Q8NGQ1 327 aa14.32□□□□□ -0.12
BRAF-201ENST00000288602 DKK2Q9UBU2 259 aa14.32□□□□□ -0.12
BRAF-201ENST00000288602 CDKN1BP46527 198 aa14.32□□□□□ -0.12
BRAF-201ENST00000288602 MDFICQ9P1T7 246 aa14.32□□□□□ -0.12
BRAF-201ENST00000288602 MRPS16Q9Y3D3 137 aaKnown RBP14.32□□□□□ -0.12
BRAF-201ENST00000288602 ANK3Q12955 4377 aaKnown RBP14.31□□□□□ -0.12
BRAF-201ENST00000288602 FASNP49327 2511 aaKnown RBP14.31□□□□□ -0.12
BRAF-201ENST00000288602 MRAP2Q96G30 205 aa14.31□□□□□ -0.12
BRAF-201ENST00000288602 MED14OSP0DP75 135 aa14.31□□□□□ -0.12
BRAF-201ENST00000288602 DEFB131AP59861 70 aa14.31□□□□□ -0.12
BRAF-201ENST00000288602 TMEM61Q8N0U2 210 aa14.31□□□□□ -0.12
BRAF-201ENST00000288602 COX11Q9Y6N1 276 aa14.31□□□□□ -0.12
BRAF-201ENST00000288602 A0A087WWL8 130 aa14.3□□□□□ -0.12
BRAF-201ENST00000288602 LGALS9BQ3B8N2 356 aa14.3□□□□□ -0.12
BRAF-201ENST00000288602 LGALS9CQ6DKI2 356 aa14.3□□□□□ -0.12
BRAF-201ENST00000288602 TMEM86BQ8N661 226 aa14.3□□□□□ -0.12
BRAF-201ENST00000288602 DEFB104AQ8WTQ1 72 aa14.3□□□□□ -0.12
BRAF-201ENST00000288602 NIPBLQ6KC79 2804 aaeCLIP14.3□□□□□ -0.122e-7■□□□□ 8.6
BRAF-201ENST00000288602 UBE2V1Q13404 147 aa14.3□□□□□ -0.12
BRAF-201ENST00000288602 LAGE3Q14657 143 aa14.3□□□□□ -0.12
BRAF-201ENST00000288602 Q8N1Y9 231 aa14.3□□□□□ -0.12
BRAF-201ENST00000288602 AP1S3Q96PC3 154 aa14.3□□□□□ -0.12
BRAF-201ENST00000288602 RBX1P62877 108 aa14.29□□□□□ -0.12
BRAF-201ENST00000288602 ANKRD39Q53RE8 183 aa14.29□□□□□ -0.12
BRAF-201ENST00000288602 SMIM17P0DL12 118 aa14.29□□□□□ -0.12
BRAF-201ENST00000288602 FOXI2Q6ZQN5 318 aa14.29□□□□□ -0.12
BRAF-201ENST00000288602 PRSS47A8MTI9 375 aa14.28□□□□□ -0.12
BRAF-201ENST00000288602 PRSS1P07477 247 aa14.28□□□□□ -0.12
BRAF-201ENST00000288602 SLC25A34Q6PIV7 304 aa14.28□□□□□ -0.12
BRAF-201ENST00000288602 AMTNQ6UX39 209 aa14.28□□□□□ -0.12
BRAF-201ENST00000288602 ODF3Q96PU9 254 aa14.28□□□□□ -0.12
BRAF-201ENST00000288602 SMIM2Q9BVW6 85 aa14.28□□□□□ -0.12
BRAF-201ENST00000288602 PEMTQ9UBM1 199 aa14.28□□□□□ -0.12
BRAF-201ENST00000288602 HECTD1Q9ULT8 2610 aa14.28□□□□□ -0.12
BRAF-201ENST00000288602 HTN1P15515 57 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms