RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TMEM61Q8N0U2 210 aa13.4□□□□□ -0.26
CAPN1-201ENST00000279247 DYNLRB2Q8TF09 96 aa13.4□□□□□ -0.26
CAPN1-201ENST00000279247 U3KQK5 164 aa13.4□□□□□ -0.26
CAPN1-201ENST00000279247 DMRTA1Q5VZB9 504 aa13.39□□□□□ -0.27
CAPN1-201ENST00000279247 Q8N2B8 174 aa13.39□□□□□ -0.27
CAPN1-201ENST00000279247 MAP1LC3AQ9H492 121 aa13.39□□□□□ -0.27
CAPN1-201ENST00000279247 EREGO14944 169 aa13.39□□□□□ -0.27
CAPN1-201ENST00000279247 CD28P10747 220 aa13.39□□□□□ -0.27
CAPN1-201ENST00000279247 A0A0J9YX75 114 aa13.39□□□□□ -0.27
CAPN1-201ENST00000279247 OR9G4Q8NGQ1 327 aa13.39□□□□□ -0.27
CAPN1-201ENST00000279247 JPT2Q9H910 190 aa13.39□□□□□ -0.27
CAPN1-201ENST00000279247 A0A096LNJ9 63 aa13.38□□□□□ -0.27
CAPN1-201ENST00000279247 LGALS9O00182 355 aa13.38□□□□□ -0.27
CAPN1-201ENST00000279247 HSPB8Q9UJY1 196 aa13.38□□□□□ -0.27
CAPN1-201ENST00000279247 LY6G6DO95868 133 aa13.38□□□□□ -0.27
CAPN1-201ENST00000279247 RNF152Q8N8N0 203 aa13.38□□□□□ -0.27
CAPN1-201ENST00000279247 FAM19A4Q96LR4 140 aa13.38□□□□□ -0.27
CAPN1-201ENST00000279247 CD5LO43866 347 aa13.37□□□□□ -0.27
CAPN1-201ENST00000279247 PRM2P04554 102 aa13.37□□□□□ -0.27
CAPN1-201ENST00000279247 RNASE3P12724 160 aaKnown RBP13.37□□□□□ -0.27
CAPN1-201ENST00000279247 CTAG1AP78358 180 aa13.37□□□□□ -0.27
CAPN1-201ENST00000279247 C4orf3Q8WVX3 66 aa13.37□□□□□ -0.27
CAPN1-201ENST00000279247 TCAPO15273 167 aa13.37□□□□□ -0.27
CAPN1-201ENST00000279247 C20orf144Q9BQM9 153 aa13.37□□□□□ -0.27
CAPN1-201ENST00000279247 ZNF747Q9BV97 191 aa13.37□□□□□ -0.27
CAPN1-201ENST00000279247 SNAI2O43623 268 aa13.36□□□□□ -0.27
CAPN1-201ENST00000279247 IGLL1P15814 213 aa13.36□□□□□ -0.27
CAPN1-201ENST00000279247 APRG1Q8IVJ8 170 aa13.36□□□□□ -0.27
CAPN1-201ENST00000279247 CITED2Q99967 270 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-201ENST00000279247 MIEN1Q9BRT3 115 aa13.36□□□□□ -0.27
CAPN1-201ENST00000279247 KLLNB2CW77 178 aa13.36□□□□□ -0.27
CAPN1-201ENST00000279247 OR2K2Q8NGT1 345 aa13.36□□□□□ -0.27
CAPN1-201ENST00000279247 A0A087WWL8 130 aa13.35□□□□□ -0.27
CAPN1-201ENST00000279247 C7orf71A4D174 169 aa13.35□□□□□ -0.27
CAPN1-201ENST00000279247 LEPP41159 167 aa13.35□□□□□ -0.27
CAPN1-201ENST00000279247 C2CD3Q4AC94 2353 aa13.35□□□□□ -0.27
CAPN1-201ENST00000279247 FAM74A4Q5TZK3 123 aa13.35□□□□□ -0.27
CAPN1-201ENST00000279247 Q6ZN92 141 aa13.35□□□□□ -0.27
CAPN1-201ENST00000279247 PEMTQ9UBM1 199 aa13.35□□□□□ -0.27
CAPN1-201ENST00000279247 C20orf202A1L168 122 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 PPBPP02775 128 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 RPL39LQ96EH5 51 aaKnown RBP13.34□□□□□ -0.27
CAPN1-201ENST00000279247 RAX2Q96IS3 184 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 SNHG12Q9BXW3 62 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 MDFICQ9P1T7 246 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 NACAE9PAV3 2078 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 TRAV9-2A0A087WT02 112 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 A0A1B0GV90 55 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 HBDP02042 147 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 CACNG7P62955 275 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 CDKN1BP46527 198 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 CD300EQ496F6 205 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-201ENST00000279247 TEX29Q8N6K0 151 aa13.34□□□□□ -0.27
CAPN1-201ENST00000279247 TMEM86BQ8N661 226 aa13.33□□□□□ -0.28
CAPN1-201ENST00000279247 F5H697 171 aa13.33□□□□□ -0.28
CAPN1-201ENST00000279247 SAMD13Q5VXD3 122 aa13.33□□□□□ -0.28
CAPN1-201ENST00000279247 LINC01006Q8NI28 216 aa13.33□□□□□ -0.28
CAPN1-201ENST00000279247 INAFM1C9JVW0 142 aa13.32□□□□□ -0.28
CAPN1-201ENST00000279247 IGLC3P0DOY3 106 aa13.32□□□□□ -0.28
CAPN1-201ENST00000279247 NEGR1Q7Z3B1 354 aa13.32□□□□□ -0.28
CAPN1-201ENST00000279247 Q8N1Y9 231 aa13.32□□□□□ -0.28
CAPN1-201ENST00000279247 TMEM158Q8WZ71 300 aa13.31□□□□□ -0.28
CAPN1-201ENST00000279247 CCL24O00175 119 aa13.31□□□□□ -0.28
CAPN1-201ENST00000279247 NRACQ8N912 160 aa13.31□□□□□ -0.28
CAPN1-201ENST00000279247 NSUN5P1Q3KNT7 163 aa13.3□□□□□ -0.28
CAPN1-201ENST00000279247 DPH3P1Q9H4G8 78 aa13.3□□□□□ -0.28
CAPN1-201ENST00000279247 SMIM17P0DL12 118 aa13.3□□□□□ -0.28
CAPN1-201ENST00000279247 IFI27L1Q96BM0 104 aa13.3□□□□□ -0.28
CAPN1-201ENST00000279247 AP1S3Q96PC3 154 aa13.3□□□□□ -0.28
CAPN1-201ENST00000279247 CYSRT1A8MQ03 144 aa13.29□□□□□ -0.28
CAPN1-201ENST00000279247 CRXO43186 299 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-201ENST00000279247 HNRNPA3P51991 378 aaKnown RBP13.29□□□□□ -0.28
CAPN1-201ENST00000279247 PET117Q6UWS5 81 aa13.29□□□□□ -0.28
CAPN1-201ENST00000279247 IGHV4-4A0A075B6R2 117 aa13.29□□□□□ -0.28
CAPN1-201ENST00000279247 HSBP1L1C9JCN9 74 aa13.29□□□□□ -0.28
CAPN1-201ENST00000279247 FOXI2Q6ZQN5 318 aa13.29□□□□□ -0.28
CAPN1-201ENST00000279247 ZNF418Q8TF45 676 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-201ENST00000279247 NXT2Q9NPJ8 142 aaKnown RBP13.29□□□□□ -0.28
CAPN1-201ENST00000279247 UQCR10Q9UDW1 63 aa13.29□□□□□ -0.28
CAPN1-201ENST00000279247 CBY3A6NI87 242 aa13.29□□□□□ -0.28
CAPN1-201ENST00000279247 M0R143 59 aa13.29□□□□□ -0.28
CAPN1-201ENST00000279247 DEFB114Q30KQ6 69 aa13.29□□□□□ -0.28
CAPN1-201ENST00000279247 DUSP14O95147 198 aaKnown RBP13.28□□□□□ -0.28
CAPN1-201ENST00000279247 PRSS1P07477 247 aa13.28□□□□□ -0.28
CAPN1-201ENST00000279247 TSPOP30536 169 aa13.28□□□□□ -0.28
CAPN1-201ENST00000279247 TENM1Q9UKZ4 2725 aa13.27□□□□□ -0.28
CAPN1-201ENST00000279247 TRBV7-9A0A0J9YWB2 115 aa13.27□□□□□ -0.28
CAPN1-201ENST00000279247 RBMY1A1P0DJD3 496 aaKnown RBP13.27□□□□□ -0.28
CAPN1-201ENST00000279247 RBMY1CP0DJD4 496 aa13.27□□□□□ -0.28
CAPN1-201ENST00000279247 RBMY1FQ15415 496 aaKnown RBP13.27□□□□□ -0.28
CAPN1-201ENST00000279247 RASL10AQ92737 203 aa13.27□□□□□ -0.28
CAPN1-201ENST00000279247 IGHV1OR15-1A0A075B7D0 117 aa13.27□□□□□ -0.29
CAPN1-201ENST00000279247 STPG4Q8N801 248 aa13.27□□□□□ -0.29
CAPN1-201ENST00000279247 SCRT2Q9NQ03 307 aa13.27□□□□□ -0.29
CAPN1-201ENST00000279247 IGHV3OR16-12A0A075B7B8 117 aa13.26□□□□□ -0.29
CAPN1-201ENST00000279247 RBMY1BA6NDE4 496 aaKnown RBP13.26□□□□□ -0.29
CAPN1-201ENST00000279247 RBMY1EA6NEQ0 496 aaKnown RBP13.26□□□□□ -0.29
CAPN1-201ENST00000279247 RBMY1DP0C7P1 496 aaKnown RBP13.26□□□□□ -0.29
CAPN1-201ENST00000279247 AMTNQ6UX39 209 aa13.26□□□□□ -0.29
CAPN1-201ENST00000279247 Q8N8P6 123 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms