RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TCF15Q12870 199 aa13.35□□□□□ -0.27
SRF-201ENST00000265354 DUX5Q96PT3 197 aa13.35□□□□□ -0.27
SRF-201ENST00000265354 DPH3P1Q9H4G8 78 aa13.35□□□□□ -0.27
SRF-201ENST00000265354 CEP192Q8TEP8 1941 aa13.35□□□□□ -0.27
SRF-201ENST00000265354 MYMXA0A1B0GTQ4 84 aa13.34□□□□□ -0.27
SRF-201ENST00000265354 RRN3P1Q2M238 152 aa13.34□□□□□ -0.27
SRF-201ENST00000265354 F8VRH5 84 aa13.34□□□□□ -0.27
SRF-201ENST00000265354 FGF6P10767 208 aa13.34□□□□□ -0.27
SRF-201ENST00000265354 ZNF876PQ49A33 203 aa13.34□□□□□ -0.27
SRF-201ENST00000265354 SPTBN5Q9NRC6 3674 aaKnown RBP13.34□□□□□ -0.27
SRF-201ENST00000265354 SAA4P35542 130 aa13.34□□□□□ -0.27
SRF-201ENST00000265354 TCTEX1D4Q5JR98 221 aa13.34□□□□□ -0.27
SRF-201ENST00000265354 GNRH2O43555 120 aa13.33□□□□□ -0.28
SRF-201ENST00000265354 INSL3P51460 131 aa13.33□□□□□ -0.28
SRF-201ENST00000265354 Q6ZUT4 128 aa13.33□□□□□ -0.28
SRF-201ENST00000265354 ZNF625Q96I27 306 aaPredicted RBP13.33□□□□□ -0.28
SRF-201ENST00000265354 UCNP55089 124 aa13.33□□□□□ -0.28
SRF-201ENST00000265354 JMJD1CQ15652 2540 aa13.33□□□□□ -0.28
SRF-201ENST00000265354 LY6DQ14210 128 aa13.33□□□□□ -0.28
SRF-201ENST00000265354 THBDP07204 575 aa13.32□□□□□ -0.28
SRF-201ENST00000265354 ODF1Q14990 250 aa13.32□□□□□ -0.28
SRF-201ENST00000265354 RNF5Q99942 180 aa13.32□□□□□ -0.28
SRF-201ENST00000265354 SMIM2Q9BVW6 85 aa13.32□□□□□ -0.28
SRF-201ENST00000265354 KNCNA6PVL3 124 aa13.32□□□□□ -0.28
SRF-201ENST00000265354 ATP5J2P56134 94 aa13.32□□□□□ -0.28
SRF-201ENST00000265354 OR11H6Q8NGC7 330 aa13.32□□□□□ -0.28
SRF-201ENST00000265354 RPL32P62910 135 aaKnown RBP13.32□□□□□ -0.28
SRF-201ENST00000265354 HIVEP2P31629 2446 aa13.31□□□□□ -0.28
SRF-201ENST00000265354 FN1P02751 2386 aaKnown RBP13.31□□□□□ -0.28
SRF-201ENST00000265354 TRAV41A0A0B4J266 112 aa13.31□□□□□ -0.28
SRF-201ENST00000265354 TNFRSF18Q9Y5U5 241 aa13.31□□□□□ -0.28
SRF-201ENST00000265354 CRYGCP07315 174 aa13.31□□□□□ -0.28
SRF-201ENST00000265354 RNASE13Q5GAN3 156 aaKnown RBP13.31□□□□□ -0.28
SRF-201ENST00000265354 TRAV12-2A0A075B6T6 113 aa13.31□□□□□ -0.28
SRF-201ENST00000265354 CTSGP08311 255 aa13.31□□□□□ -0.28
SRF-201ENST00000265354 ZFYVE26Q68DK2 2539 aa13.3□□□□□ -0.28
SRF-201ENST00000265354 H3BMM0 161 aa13.3□□□□□ -0.28
SRF-201ENST00000265354 OVOL3O00110 214 aa13.3□□□□□ -0.28
SRF-201ENST00000265354 UBE2WQ96B02 151 aa13.3□□□□□ -0.28
SRF-201ENST00000265354 REV3LO60673 3130 aa13.3□□□□□ -0.28
SRF-201ENST00000265354 A0A087WX48 190 aa13.3□□□□□ -0.28
SRF-201ENST00000265354 BOD1L1Q8NFC6 3051 aa13.3□□□□□ -0.28
SRF-201ENST00000265354 POLQO75417 2590 aa13.3□□□□□ -0.28
SRF-201ENST00000265354 PPP1R17O96001 155 aa13.29□□□□□ -0.28
SRF-201ENST00000265354 C7orf69Q9H7B7 122 aa13.29□□□□□ -0.28
SRF-201ENST00000265354 CD28P10747 220 aa13.29□□□□□ -0.28
SRF-201ENST00000265354 SNRPD3P62318 126 aaKnown RBP13.29□□□□□ -0.28
SRF-201ENST00000265354 TOMM7Q9P0U1 55 aa13.29□□□□□ -0.28
SRF-201ENST00000265354 EXPH5Q8NEV8 1989 aa13.28□□□□□ -0.28
SRF-201ENST00000265354 MYCNOSP40205 109 aa13.28□□□□□ -0.28
SRF-201ENST00000265354 SPANXB1Q9NS25 103 aaPredicted RBP13.28□□□□□ -0.28
SRF-201ENST00000265354 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
SRF-201ENST00000265354 IGLV1-47P01700 117 aa13.28□□□□□ -0.28
SRF-201ENST00000265354 ATXN8Q156A1 80 aa13.28□□□□□ -0.28
SRF-201ENST00000265354 RHPN1-AS1Q9BWJ2 59 aa13.28□□□□□ -0.28
SRF-201ENST00000265354 MAPKAPK5-AS1Q8N8E1 139 aa13.28□□□□□ -0.28
SRF-201ENST00000265354 BPESC1Q9GZL8 116 aa13.28□□□□□ -0.28
SRF-201ENST00000265354 IGLV2-11P01706 119 aa13.27□□□□□ -0.29
SRF-201ENST00000265354 SDHAF1A6NFY7 115 aa13.27□□□□□ -0.29
SRF-201ENST00000265354 M0QXV9 152 aa13.27□□□□□ -0.29
SRF-201ENST00000265354 PAPPA-AS1Q5QFB9 102 aa13.27□□□□□ -0.29
SRF-201ENST00000265354 KLK9Q9UKQ9 250 aa13.27□□□□□ -0.29
SRF-201ENST00000265354 FAM236AA0A1B0GUQ0 79 aa13.26□□□□□ -0.29
SRF-201ENST00000265354 FAM236BA0A1B0GV22 79 aa13.26□□□□□ -0.29
SRF-201ENST00000265354 SHISA9B4DS77 424 aa13.26□□□□□ -0.29
SRF-201ENST00000265354 TEN1Q86WV5 123 aa13.26□□□□□ -0.29
SRF-201ENST00000265354 M0R2P5 195 aa13.26□□□□□ -0.29
SRF-201ENST00000265354 KAAG1Q9UBP8 84 aa13.26□□□□□ -0.29
SRF-201ENST00000265354 DUSP14O95147 198 aaKnown RBP13.26□□□□□ -0.29
SRF-201ENST00000265354 CIRBPQ14011 172 aaKnown RBP13.26□□□□□ -0.29
SRF-201ENST00000265354 CFAP47Q6ZTR5 3102 aa13.25□□□□□ -0.29
SRF-201ENST00000265354 PLA2G2CQ5R387 149 aa13.25□□□□□ -0.29
SRF-201ENST00000265354 H3BUX3 64 aa13.25□□□□□ -0.29
SRF-201ENST00000265354 VCYO14598 125 aa13.25□□□□□ -0.29
SRF-201ENST00000265354 FANCD2OSQ96PS1 177 aa13.25□□□□□ -0.29
SRF-201ENST00000265354 RPL39P62891 51 aaKnown RBP13.25□□□□□ -0.29
SRF-201ENST00000265354 C11orf44Q8N8P7 122 aa13.25□□□□□ -0.29
SRF-201ENST00000265354 DYNLRB2Q8TF09 96 aa13.25□□□□□ -0.29
SRF-201ENST00000265354 PHLDA1Q8WV24 401 aaPredicted RBP13.25□□□□□ -0.29
SRF-201ENST00000265354 DUX3Q96PT4 197 aa13.25□□□□□ -0.29
SRF-201ENST00000265354 C9orf139Q6ZV77 190 aa13.24□□□□□ -0.29
SRF-201ENST00000265354 ANKRD29Q8N6D5 301 aa13.24□□□□□ -0.29
SRF-201ENST00000265354 CCDC179H3BU77 68 aa13.24□□□□□ -0.29
SRF-201ENST00000265354 NDUFV3P56181 108 aaKnown RBP13.24□□□□□ -0.29
SRF-201ENST00000265354 OVOL1O14753 267 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 SPINK13Q1W4C9 94 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 LINC01559Q495D7 138 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 IGF1P05019 195 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 ZFP2Q6ZN57 461 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 SPANXA1Q9NS26 97 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 IGLV11-55A0A075B6I3 123 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 NPFFO15130 113 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 TRACP01848 142 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 MRAPQ8TCY5 172 aa13.23□□□□□ -0.29
SRF-201ENST00000265354 ITLN2Q8WWU7 325 aaPredicted RBP13.23□□□□□ -0.29
SRF-201ENST00000265354 GATA3P23771 443 aa13.22□□□□□ -0.29
SRF-201ENST00000265354 Q6ZQT7 251 aa13.22□□□□□ -0.29
SRF-201ENST00000265354 JPT2Q9H910 190 aa13.22□□□□□ -0.29
SRF-201ENST00000265354 ABCA12Q86UK0 2595 aa13.22□□□□□ -0.29
SRF-201ENST00000265354 BUB3O43684 328 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms