RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SORL1Q92673 2214 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 LYNX1G3V0Z9 82 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 SPART-AS1P0CW21 52 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 LYNX1P0DP58 116 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 TRAV26-1A0A087WT03 109 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 ICOSQ9Y6W8 199 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 A0A1W2PRX2 142 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 IGKV1-39P01597 117 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 IGKV1D-39P04432 117 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 C3orf79P0CE67 100 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 MRPL51Q4U2R6 128 aaKnown RBP3.39□□□□□ -1.87
VPS13C-202ENST00000261517 ST6GALNAC6Q969X2 333 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 SIGLEC8Q9NYZ4 499 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 IGHV3-35A0A0C4DH35 117 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 A0A0J9YXY3 114 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 IGF1P05019 195 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 GP9P14770 177 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 GAGE2EQ4V326 116 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 C2orf82Q6UX34 121 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 GAGE2DQ9UEU5 116 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 A0A0G2JRQ6 117 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 KLK5Q9Y337 293 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-202ENST00000261517 A4D1N5 150 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 ODF3BA8MYP8 253 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 ZNRD1Q9P1U0 126 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 HELZ2Q9BYK8 2649 aaKnown RBP3.38□□□□□ -1.87
VPS13C-202ENST00000261517 H3BUT2 72 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 RBMY1FQ15415 496 aaKnown RBP3.38□□□□□ -1.87
VPS13C-202ENST00000261517 C1orf159Q96HA4 380 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 MRPL36Q9P0J6 103 aaKnown RBP3.38□□□□□ -1.87
VPS13C-202ENST00000261517 CLPSL1A2RUU4 121 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 C9orf118A6NHY6 69 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 MDKP21741 143 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-202ENST00000261517 TP53TG1Q9Y2A0 90 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 IGHV7-81A0A0B4J1V7 117 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 P0C879 139 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 ZC2HC1BQ5TFG8 222 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 K7EIM0 57 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 MRGPRG-AS1Q2M3A8 158 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 DSPP15924 2871 aaKnown RBP3.38□□□□□ -1.87
VPS13C-202ENST00000261517 OCIAD2Q56VL3 154 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 LYRM9A8MSI8 78 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 BUB3O43684 328 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 UBL5Q9BZL1 73 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 K7EQD1 137 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 ATP5G1P05496 136 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 KIR2DL5BQ8NHK3 375 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 TMEM263Q8WUH6 116 aaKnown RBP3.38□□□□□ -1.87
VPS13C-202ENST00000261517 CFAP54Q96N23 3096 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 F8WDY8 70 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 BRD3OSQ6XYD6 125 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 Q71RC1 249 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-202ENST00000261517 CD300EQ496F6 205 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-202ENST00000261517 SIRPDQ9H106 197 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 ATRAIDQ6UW56 229 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 MBD6Q96DN6 1003 aa3.38□□□□□ -1.87
VPS13C-202ENST00000261517 SNHG12Q9BXW3 62 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 PRO1854Q9UHT4 67 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 S4R3C0 116 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 SPATA12Q7Z6I5 190 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 SRSF3P84103 164 aaKnown RBP3.37□□□□□ -1.87
VPS13C-202ENST00000261517 KIR3DS1Q14943 382 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 ZC2HC1AQ96GY0 325 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 TRAV4A0A0B4J268 109 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 WIPF3A6NGB9 483 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 HTN3P15516 51 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 DSCR8Q96T75 97 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 IGKV3OR2-268A0A0C4DH90 116 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 CEND1Q8N111 149 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 LAMTOR3Q9UHA4 124 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 J3QQQ9 107 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 Q8N9W7 124 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 NDUFA12Q9UI09 145 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 IGHV1-58A0A0C4DH39 117 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 UBE2WQ96B02 151 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 MGAQ8IWI9 3026 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 CCL18P55774 89 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 TRBV7-3A0A075B6L6 115 aa3.37□□□□□ -1.87
VPS13C-202ENST00000261517 F5H768 121 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 CFAP46Q8IYW2 2715 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 C5orf24Q7Z6I8 188 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 PIFOQ8TCI5 191 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 C2CD3Q4AC94 2353 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 A6NDX4 124 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 RPL35AP18077 110 aaKnown RBP3.36□□□□□ -1.87
VPS13C-202ENST00000261517 ANXA2RQ3ZCQ2 193 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 Q8TAT8 98 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 CGB3P0DN86 165 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 CGB7P0DN87 165 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 IGLV2-23P01705 113 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 RNASE1P07998 156 aaKnown RBP3.36□□□□□ -1.87
VPS13C-202ENST00000261517 FREM2Q5SZK8 3169 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 IGKV1-17P01599 117 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 CTSGP08311 255 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 RNF224P0DH78 156 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 C11orf86A6NJI1 115 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 IGLC2P0DOY2 106 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 IGHV4-39P01824 125 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms