RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 K7EIM0 57 aa14.56□□□□□ -0.08
SMARCC1-201ENST00000254480 BOD1L2Q8IYS8 172 aa14.56□□□□□ -0.08
SMARCC1-201ENST00000254480 PRO1854Q9UHT4 67 aa14.56□□□□□ -0.08
SMARCC1-201ENST00000254480 TTC28Q96AY4 2481 aa14.56□□□□□ -0.08
SMARCC1-201ENST00000254480 CARD19Q96LW7 228 aa14.55□□□□□ -0.08
SMARCC1-201ENST00000254480 C11orf52Q96A22 123 aa14.55□□□□□ -0.08
SMARCC1-201ENST00000254480 WNK1Q9H4A3 2382 aa14.55□□□□□ -0.08
SMARCC1-201ENST00000254480 NPSP0C0P6 89 aa14.55□□□□□ -0.08
SMARCC1-201ENST00000254480 PCP2Q8IVA1 136 aa14.55□□□□□ -0.08
SMARCC1-201ENST00000254480 hADV29S1A0JD25 119 aa14.55□□□□□ -0.08
SMARCC1-201ENST00000254480 I3L2K1 104 aa14.55□□□□□ -0.08
SMARCC1-201ENST00000254480 NOTCH2Q04721 2471 aa14.55□□□□□ -0.08
SMARCC1-201ENST00000254480 CHD3Q12873 2000 aaKnown RBP14.55□□□□□ -0.08
SMARCC1-201ENST00000254480 SPG11Q96JI7 2443 aa14.54□□□□□ -0.08
SMARCC1-201ENST00000254480 ADAMTS9Q9P2N4 1935 aa14.54□□□□□ -0.08
SMARCC1-201ENST00000254480 CDPF1Q6NVV7 123 aa14.54□□□□□ -0.08
SMARCC1-201ENST00000254480 SEM1Q6ZVN7 128 aa14.54□□□□□ -0.08
SMARCC1-201ENST00000254480 PRAC2D3DTV9 90 aa14.54□□□□□ -0.08
SMARCC1-201ENST00000254480 PYGO2Q9BRQ0 406 aa14.53□□□□□ -0.08
SMARCC1-201ENST00000254480 NCKAP5O14513 1909 aa14.53□□□□□ -0.08
SMARCC1-201ENST00000254480 IGFL2Q6UWQ7 119 aa14.53□□□□□ -0.08
SMARCC1-201ENST00000254480 DSCR8Q96T75 97 aa14.53□□□□□ -0.08
SMARCC1-201ENST00000254480 H3BUA1 57 aa14.53□□□□□ -0.08
SMARCC1-201ENST00000254480 CTSGP08311 255 aa14.53□□□□□ -0.08
SMARCC1-201ENST00000254480 C20orf78Q9BR46 151 aa14.52□□□□□ -0.08
SMARCC1-201ENST00000254480 RMI2Q96E14 147 aa14.52□□□□□ -0.08
SMARCC1-201ENST00000254480 PATE2Q6UY27 113 aa14.52□□□□□ -0.09
SMARCC1-201ENST00000254480 BUB3O43684 328 aa14.52□□□□□ -0.09
SMARCC1-201ENST00000254480 LINC00173Q6ZV60 143 aa14.52□□□□□ -0.09
SMARCC1-201ENST00000254480 Q8N9W7 124 aa14.52□□□□□ -0.09
SMARCC1-201ENST00000254480 IGKV1-17P01599 117 aa14.51□□□□□ -0.09
SMARCC1-201ENST00000254480 E7EUB6 86 aa14.51□□□□□ -0.09
SMARCC1-201ENST00000254480 C10orf105Q8TEF2 133 aa14.51□□□□□ -0.09
SMARCC1-201ENST00000254480 ARHGAP21Q5T5U3 1957 aa14.51□□□□□ -0.09
SMARCC1-201ENST00000254480 NDUFS5O43920 106 aa14.51□□□□□ -0.09
SMARCC1-201ENST00000254480 IL15RAQ13261 267 aa14.51□□□□□ -0.09
SMARCC1-201ENST00000254480 PROP1O75360 226 aa14.51□□□□□ -0.09
SMARCC1-201ENST00000254480 UBL5Q9BZL1 73 aa14.5□□□□□ -0.09
SMARCC1-201ENST00000254480 C9orf153Q5TBE3 101 aa14.5□□□□□ -0.09
SMARCC1-201ENST00000254480 IGLV11-55A0A075B6I3 123 aa14.5□□□□□ -0.09
SMARCC1-201ENST00000254480 C5orf56Q8N8D9 126 aa14.5□□□□□ -0.09
SMARCC1-201ENST00000254480 IGHG4P01861 327 aa14.5□□□□□ -0.09
SMARCC1-201ENST00000254480 NPBQ8NG41 125 aa14.5□□□□□ -0.09
SMARCC1-201ENST00000254480 TRAV4A0A0B4J268 109 aa14.49□□□□□ -0.09
SMARCC1-201ENST00000254480 C9orf66Q5T8R8 295 aa14.49□□□□□ -0.09
SMARCC1-201ENST00000254480 C10orf91Q5T1B1 145 aa14.49□□□□□ -0.09
SMARCC1-201ENST00000254480 DAND5Q8N907 189 aa14.49□□□□□ -0.09
SMARCC1-201ENST00000254480 IGHV4-28A0A0C4DH34 117 aa14.49□□□□□ -0.09
SMARCC1-201ENST00000254480 C1orf43Q9BWL3 253 aa14.49□□□□□ -0.09
SMARCC1-201ENST00000254480 TRBV20-1A0A075B6N2 111 aa14.49□□□□□ -0.09
SMARCC1-201ENST00000254480 INAFM2P0DMQ5 153 aa14.49□□□□□ -0.09
SMARCC1-201ENST00000254480 ZNF747Q9BV97 191 aa14.49□□□□□ -0.09
SMARCC1-201ENST00000254480 C8orf31Q8N9H6 132 aa14.48□□□□□ -0.09
SMARCC1-201ENST00000254480 TRAV13-2A0A0B4J235 113 aa14.48□□□□□ -0.09
SMARCC1-201ENST00000254480 A0A1W2PPM0 123 aa14.48□□□□□ -0.09
SMARCC1-201ENST00000254480 TRBV12-3P01733 135 aa14.48□□□□□ -0.09
SMARCC1-201ENST00000254480 DEFB135Q30KP9 77 aa14.48□□□□□ -0.09
SMARCC1-201ENST00000254480 PLA2G5P39877 138 aa14.48□□□□□ -0.09
SMARCC1-201ENST00000254480 Q8NFD4 153 aa14.48□□□□□ -0.09
SMARCC1-201ENST00000254480 RPL39P62891 51 aaKnown RBP14.47□□□□□ -0.09
SMARCC1-201ENST00000254480 Q8N7P7 452 aa14.47□□□□□ -0.09
SMARCC1-201ENST00000254480 MSMPQ1L6U9 139 aa14.47□□□□□ -0.09
SMARCC1-201ENST00000254480 C12orf74Q32Q52 190 aa14.47□□□□□ -0.09
SMARCC1-201ENST00000254480 ZNF493Q6ZR52 646 aa14.47□□□□□ -0.09
SMARCC1-201ENST00000254480 Q8N1Y9 231 aa14.47□□□□□ -0.09
SMARCC1-201ENST00000254480 K7EP13 123 aa14.46□□□□□ -0.09
SMARCC1-201ENST00000254480 MRPL36Q9P0J6 103 aaKnown RBP14.46□□□□□ -0.09
SMARCC1-201ENST00000254480 K7EP34 96 aa14.46□□□□□ -0.09
SMARCC1-201ENST00000254480 NUPR1O60356 82 aa14.46□□□□□ -0.09
SMARCC1-201ENST00000254480 ATP6V0E2Q8NHE4 81 aa14.46□□□□□ -0.09
SMARCC1-201ENST00000254480 NUP210Q8TEM1 1887 aaPredicted RBP14.46□□□□□ -0.09
SMARCC1-201ENST00000254480 PPDPFLQ8WWR9 84 aa14.46□□□□□ -0.09
SMARCC1-201ENST00000254480 A0A0J9YXV3 536 aa14.46□□□□□ -0.1
SMARCC1-201ENST00000254480 K7EQD1 137 aa14.46□□□□□ -0.1
SMARCC1-201ENST00000254480 CAMK2N2Q96S95 79 aa14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 CCL25O15444 150 aa14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 PRB2P02812 416 aaPredicted RBP14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 NTN5Q8WTR8 489 aaPredicted RBP14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 PLA2G2EQ9NZK7 142 aa14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 F8W735 103 aaPredicted RBP14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 SLC25A29Q8N8R3 303 aa14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 HIST2H2BDQ6DRA6 164 aa14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 C15orf53Q8NAA6 179 aa14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 WFDC11Q8NEX6 87 aa14.45□□□□□ -0.1
SMARCC1-201ENST00000254480 C16orf54Q6UWD8 224 aa14.44□□□□□ -0.1
SMARCC1-201ENST00000254480 FREM1Q5H8C1 2179 aa14.44□□□□□ -0.1
SMARCC1-201ENST00000254480 OTOGLQ3ZCN5 2332 aa14.44□□□□□ -0.1
SMARCC1-201ENST00000254480 RBAKDNA6NC62 111 aa14.44□□□□□ -0.1
SMARCC1-201ENST00000254480 C2orf70A6NJV1 201 aa14.44□□□□□ -0.1
SMARCC1-201ENST00000254480 KRTAP27-1Q3LI81 207 aa14.44□□□□□ -0.1
SMARCC1-201ENST00000254480 TTTY13Q9BZ97 58 aa14.44□□□□□ -0.1
SMARCC1-201ENST00000254480 C16orf74Q96GX8 76 aa14.43□□□□□ -0.1
SMARCC1-201ENST00000254480 SPART-AS1P0CW21 52 aa14.43□□□□□ -0.1
SMARCC1-201ENST00000254480 TIMM17AQ99595 171 aa14.43□□□□□ -0.1
SMARCC1-201ENST00000254480 CSPG4Q6UVK1 2322 aa14.43□□□□□ -0.1
SMARCC1-201ENST00000254480 MRPL52Q86TS9 123 aaKnown RBP14.43□□□□□ -0.1
SMARCC1-201ENST00000254480 UNQ9165/PRO28630Q6UXU0 137 aa14.42□□□□□ -0.1
SMARCC1-201ENST00000254480 ICOSQ9Y6W8 199 aa14.42□□□□□ -0.1
SMARCC1-201ENST00000254480 HIST2H2BCQ6DN03 193 aa14.42□□□□□ -0.1
SMARCC1-201ENST00000254480 CRYBA4P53673 196 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms