RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 S100A4P26447 101 aaKnown RBP10.01□□□□□ -0.81
VPS25-201ENST00000253794 NANOS2P60321 138 aaKnown RBP10.01□□□□□ -0.81
VPS25-201ENST00000253794 ERVFC1-1P60608 527 aa10.01□□□□□ -0.81
VPS25-201ENST00000253794 DAD1P61803 113 aa10.01□□□□□ -0.81
VPS25-201ENST00000253794 ADIRFQ15847 76 aa10.01□□□□□ -0.81
VPS25-201ENST00000253794 SFRP2Q96HF1 295 aa10.01□□□□□ -0.81
VPS25-201ENST00000253794 TRGV1A0A0A0MS02 117 aa10□□□□□ -0.81
VPS25-201ENST00000253794 A0A1W2PPQ1 181 aa10□□□□□ -0.81
VPS25-201ENST00000253794 FAM231BA6NCW3 169 aa10□□□□□ -0.81
VPS25-201ENST00000253794 H3BVH4 76 aa10□□□□□ -0.81
VPS25-201ENST00000253794 Q6ZTC4 211 aa10□□□□□ -0.81
VPS25-201ENST00000253794 CARHSP1Q9Y2V2 147 aaKnown RBP10□□□□□ -0.81
VPS25-201ENST00000253794 V9GYV3 84 aa10□□□□□ -0.81
VPS25-201ENST00000253794 A8MWL6 223 aa9.99□□□□□ -0.81
VPS25-201ENST00000253794 F8W036 122 aa9.99□□□□□ -0.81
VPS25-201ENST00000253794 FOXA3P55318 350 aaPredicted RBP9.99□□□□□ -0.81
VPS25-201ENST00000253794 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
VPS25-201ENST00000253794 CNFNQ9BYD5 112 aa9.99□□□□□ -0.81
VPS25-201ENST00000253794 GFRA4Q9GZZ7 299 aa9.99□□□□□ -0.81
VPS25-201ENST00000253794 MRPL16Q9NX20 251 aaKnown RBP9.99□□□□□ -0.81
VPS25-201ENST00000253794 STARD9Q9P2P6 4700 aa9.99□□□□□ -0.81
VPS25-201ENST00000253794 GAGE12BA1L429 117 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 F2Z2F3 143 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 GAGE7O76087 117 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 GAGE12FP0CL80 117 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 GAGE12GP0CL81 117 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 GAGE12IP0CL82 117 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 DEFB130BP0DP73 79 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 DEFB130AP0DP74 79 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 CTRLP40313 264 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 NDUFA5Q16718 116 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 ZNF876PQ49A33 203 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 WDR73Q6P4I2 378 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 FER1L6-AS1Q8NA97 138 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 OR10G8Q8NGN5 311 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 MUC7Q8TAX7 377 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 TSKUQ8WUA8 353 aa9.98□□□□□ -0.81
VPS25-201ENST00000253794 MUC4Q99102 2169 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 IGHV4-4A0A075B6R2 117 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 TRAV10A0A0B4J240 114 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 CIDEAO60543 219 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 ATP5G1P05496 136 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 GZMBP10144 247 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 ZFP82Q8N141 532 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 SYT8Q8NBV8 401 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 GTSF1Q8WW33 167 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 PHLDA3Q9Y5J5 127 aa9.97□□□□□ -0.81
VPS25-201ENST00000253794 TRGV2A0A075B6R0 118 aa9.96□□□□□ -0.82
VPS25-201ENST00000253794 TRAV4A0A0B4J268 109 aa9.96□□□□□ -0.82
VPS25-201ENST00000253794 PPP1R2P9O14990 202 aa9.96□□□□□ -0.82
VPS25-201ENST00000253794 RS1O15537 224 aa9.96□□□□□ -0.82
VPS25-201ENST00000253794 POM121L12Q8N7R1 296 aa9.96□□□□□ -0.82
VPS25-201ENST00000253794 OR10AG1Q8NH19 301 aa9.96□□□□□ -0.82
VPS25-201ENST00000253794 PHLDA1Q8WV24 401 aaPredicted RBP9.96□□□□□ -0.82
VPS25-201ENST00000253794 A8MWV9 139 aa9.95□□□□□ -0.82
VPS25-201ENST00000253794 C3orf84H3BNL1 204 aa9.95□□□□□ -0.82
VPS25-201ENST00000253794 CACNG7P62955 275 aa9.95□□□□□ -0.82
VPS25-201ENST00000253794 DMRTA1Q5VZB9 504 aa9.95□□□□□ -0.82
VPS25-201ENST00000253794 ANAPC16Q96DE5 110 aa9.95□□□□□ -0.82
VPS25-201ENST00000253794 FAM210BQ96KR6 192 aa9.95□□□□□ -0.82
VPS25-201ENST00000253794 PLECQ15149 4684 aaKnown RBP9.94□□□□□ -0.82
VPS25-201ENST00000253794 DEFB131BA0A096LNP1 70 aa9.94□□□□□ -0.82
VPS25-201ENST00000253794 SMIM27A0A1W2PRY6 76 aa9.94□□□□□ -0.82
VPS25-201ENST00000253794 NUPR2A6NF83 97 aa9.94□□□□□ -0.82
VPS25-201ENST00000253794 MT-ND4LP03901 98 aa9.94□□□□□ -0.82
VPS25-201ENST00000253794 RNF212Q495C1 297 aa9.94□□□□□ -0.82
VPS25-201ENST00000253794 CFAP126Q5VTH2 177 aa9.94□□□□□ -0.82
VPS25-201ENST00000253794 UFSP1Q6NVU6 142 aa9.94□□□□□ -0.82
VPS25-201ENST00000253794 CEMP1Q6PRD7 247 aaPredicted RBP9.94□□□□□ -0.82
VPS25-201ENST00000253794 LYZL1Q6UWQ5 148 aa9.94□□□□□ -0.82
VPS25-201ENST00000253794 ZFP2Q6ZN57 461 aa9.94□□□□□ -0.82
VPS25-201ENST00000253794 SPANXN1Q5VSR9 72 aa9.93□□□□□ -0.82
VPS25-201ENST00000253794 ZNF479Q96JC4 524 aa9.93□□□□□ -0.82
VPS25-201ENST00000253794 HIGD1CA8MV81 97 aa9.92□□□□□ -0.82
VPS25-201ENST00000253794 M0R381 172 aa9.92□□□□□ -0.82
VPS25-201ENST00000253794 HOXA5P20719 270 aa9.92□□□□□ -0.82
VPS25-201ENST00000253794 SLAQ13239 276 aa9.92□□□□□ -0.82
VPS25-201ENST00000253794 FHL2Q14192 279 aa9.92□□□□□ -0.82
VPS25-201ENST00000253794 SLC7A5P1Q8MH63 180 aa9.92□□□□□ -0.82
VPS25-201ENST00000253794 OR4C5Q8NGB2 326 aa9.92□□□□□ -0.82
VPS25-201ENST00000253794 NAT8BQ9UHF3 227 aa9.92□□□□□ -0.82
VPS25-201ENST00000253794 H3BNG1 76 aa9.91□□□□□ -0.82
VPS25-201ENST00000253794 RHODO00212 210 aa9.91□□□□□ -0.82
VPS25-201ENST00000253794 CRYGDP07320 174 aa9.91□□□□□ -0.82
VPS25-201ENST00000253794 RHEBQ15382 184 aa9.91□□□□□ -0.82
VPS25-201ENST00000253794 NUP35Q8NFH5 326 aa9.91□□□□□ -0.82
VPS25-201ENST00000253794 TPPP3Q9BW30 176 aa9.91□□□□□ -0.82
VPS25-201ENST00000253794 CTDSP1Q9GZU7 261 aa9.91□□□□□ -0.82
VPS25-201ENST00000253794 JPT2Q9H910 190 aa9.91□□□□□ -0.82
VPS25-201ENST00000253794 TMEM242Q9NWH2 141 aa9.91□□□□□ -0.82
VPS25-201ENST00000253794 A0A087WWC5 75 aa9.9□□□□□ -0.82
VPS25-201ENST00000253794 GATA1P15976 413 aaPredicted RBP9.9□□□□□ -0.82
VPS25-201ENST00000253794 NTF3P20783 257 aa9.9□□□□□ -0.82
VPS25-201ENST00000253794 TCTAP57738 103 aa9.9□□□□□ -0.82
VPS25-201ENST00000253794 CASC10Q5T4H9 136 aa9.9□□□□□ -0.82
VPS25-201ENST00000253794 CLRN3Q8NCR9 226 aa9.9□□□□□ -0.82
VPS25-201ENST00000253794 AP1S3Q96PC3 154 aa9.9□□□□□ -0.82
VPS25-201ENST00000253794 IMMP2LQ96T52 175 aa9.9□□□□□ -0.82
VPS25-201ENST00000253794 KLK5Q9Y337 293 aaPredicted RBP9.9□□□□□ -0.82
VPS25-201ENST00000253794 KIF25-AS1Q9Y6Z4 181 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms