RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 RBMY1BA6NDE4 496 aaKnown RBP12.78□□□□□ -0.36
HOXC6-201ENST00000243108 RBMY1EA6NEQ0 496 aaKnown RBP12.78□□□□□ -0.36
HOXC6-201ENST00000243108 RBMY1DP0C7P1 496 aaKnown RBP12.78□□□□□ -0.36
HOXC6-201ENST00000243108 IQCJQ1A5X6 159 aa12.78□□□□□ -0.36
HOXC6-201ENST00000243108 MUC7Q8TAX7 377 aa12.78□□□□□ -0.36
HOXC6-201ENST00000243108 LYSTQ99698 3801 aa12.77□□□□□ -0.36
HOXC6-201ENST00000243108 C3orf84H3BNL1 204 aa12.77□□□□□ -0.36
HOXC6-201ENST00000243108 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.36
HOXC6-201ENST00000243108 EDA2RQ9HAV5 297 aa12.77□□□□□ -0.36
HOXC6-201ENST00000243108 TRAV21A0A0B4J279 112 aa12.76□□□□□ -0.37
HOXC6-201ENST00000243108 ZNF688P0C7X2 276 aa12.76□□□□□ -0.37
HOXC6-201ENST00000243108 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
HOXC6-201ENST00000243108 Q6ZQT7 251 aa12.76□□□□□ -0.37
HOXC6-201ENST00000243108 ODF3Q96PU9 254 aa12.76□□□□□ -0.37
HOXC6-201ENST00000243108 RETNQ9HD89 108 aa12.76□□□□□ -0.37
HOXC6-201ENST00000243108 GPX1P07203 203 aa12.76□□□□□ -0.37
HOXC6-201ENST00000243108 TFPI2P48307 235 aa12.76□□□□□ -0.37
HOXC6-201ENST00000243108 PSMG4Q5JS54 123 aa12.76□□□□□ -0.37
HOXC6-201ENST00000243108 TRAV2A0A0B4J234 112 aa12.75□□□□□ -0.37
HOXC6-201ENST00000243108 KLLNB2CW77 178 aa12.75□□□□□ -0.37
HOXC6-201ENST00000243108 OR11H12B2RN74 326 aa12.75□□□□□ -0.37
HOXC6-201ENST00000243108 NTF3P20783 257 aa12.75□□□□□ -0.37
HOXC6-201ENST00000243108 FAM104BQ5XKR9 115 aa12.75□□□□□ -0.37
HOXC6-201ENST00000243108 CDPF1Q6NVV7 123 aa12.75□□□□□ -0.37
HOXC6-201ENST00000243108 SPATA25Q9BR10 227 aa12.75□□□□□ -0.37
HOXC6-201ENST00000243108 A0A0J9YX75 114 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 ZNF324O75467 553 aaPredicted RBP12.74□□□□□ -0.37
HOXC6-201ENST00000243108 OR5AL1P0C617 328 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 DMRTA1Q5VZB9 504 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 SAMD10Q9BYL1 202 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 MUC21A0A0G2JKD1 596 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 MUC21A0A140T8X8 626 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 SNAI2O43623 268 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 TWIST1Q15672 202 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 URB1-AS1Q96HZ7 61 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 RYR2Q92736 4967 aa12.74□□□□□ -0.37
HOXC6-201ENST00000243108 Q6ZWC4 215 aa12.73□□□□□ -0.37
HOXC6-201ENST00000243108 IGHV4-4A0A075B6R2 117 aa12.72□□□□□ -0.37
HOXC6-201ENST00000243108 J3KRW8 73 aa12.72□□□□□ -0.37
HOXC6-201ENST00000243108 RNASE4P34096 147 aaKnown RBP12.72□□□□□ -0.37
HOXC6-201ENST00000243108 AMTP48728 403 aa12.72□□□□□ -0.37
HOXC6-201ENST00000243108 KIR3DS1Q14943 382 aa12.72□□□□□ -0.37
HOXC6-201ENST00000243108 FAM110AQ9BQ89 295 aa12.72□□□□□ -0.37
HOXC6-201ENST00000243108 FOXI2Q6ZQN5 318 aa12.71□□□□□ -0.37
HOXC6-201ENST00000243108 NIT1Q86X76 327 aa12.71□□□□□ -0.37
HOXC6-201ENST00000243108 AMN1Q8IY45 258 aa12.71□□□□□ -0.37
HOXC6-201ENST00000243108 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.37
HOXC6-201ENST00000243108 LEPP41159 167 aa12.71□□□□□ -0.38
HOXC6-201ENST00000243108 SSTP61278 116 aa12.71□□□□□ -0.38
HOXC6-201ENST00000243108 S100A12P80511 92 aa12.71□□□□□ -0.38
HOXC6-201ENST00000243108 MRPL51Q4U2R6 128 aaKnown RBP12.71□□□□□ -0.38
HOXC6-201ENST00000243108 EBLN2Q6P2I7 272 aa12.71□□□□□ -0.38
HOXC6-201ENST00000243108 CHCHD1Q96BP2 118 aaKnown RBP12.71□□□□□ -0.38
HOXC6-201ENST00000243108 TRAV25A0A0B4J276 109 aa12.7□□□□□ -0.38
HOXC6-201ENST00000243108 PCP4L1A6NKN8 68 aa12.7□□□□□ -0.38
HOXC6-201ENST00000243108 HSBP1O75506 76 aa12.7□□□□□ -0.38
HOXC6-201ENST00000243108 DUSP14O95147 198 aaKnown RBP12.7□□□□□ -0.38
HOXC6-201ENST00000243108 MED14OSP0DP75 135 aa12.7□□□□□ -0.38
HOXC6-201ENST00000243108 PMCHP20382 165 aa12.7□□□□□ -0.38
HOXC6-201ENST00000243108 CACNG7P62955 275 aa12.7□□□□□ -0.38
HOXC6-201ENST00000243108 RNASEKQ6P5S7 137 aaKnown RBP12.7□□□□□ -0.38
HOXC6-201ENST00000243108 OR10AG1Q8NH19 301 aa12.7□□□□□ -0.38
HOXC6-201ENST00000243108 GSN-AS1Q9NRJ2 163 aa12.7□□□□□ -0.38
HOXC6-201ENST00000243108 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
HOXC6-201ENST00000243108 ZFAND6Q6FIF0 208 aa12.69□□□□□ -0.38
HOXC6-201ENST00000243108 NAGKQ9UJ70 344 aa12.69□□□□□ -0.38
HOXC6-201ENST00000243108 ORMDL3Q8N138 153 aa12.68□□□□□ -0.38
HOXC6-201ENST00000243108 FAM19A2Q8N3H0 131 aa12.68□□□□□ -0.38
HOXC6-201ENST00000243108 RNF185Q96GF1 192 aa12.68□□□□□ -0.38
HOXC6-201ENST00000243108 A8MTW9 85 aa12.68□□□□□ -0.38
HOXC6-201ENST00000243108 D6R8Y8 96 aa12.68□□□□□ -0.38
HOXC6-201ENST00000243108 H3BVH4 76 aa12.68□□□□□ -0.38
HOXC6-201ENST00000243108 SCRT2Q9NQ03 307 aa12.68□□□□□ -0.38
HOXC6-201ENST00000243108 C7orf71A4D174 169 aa12.67□□□□□ -0.38
HOXC6-201ENST00000243108 LINC00614P0C842 121 aa12.67□□□□□ -0.38
HOXC6-201ENST00000243108 RAB4AP20338 218 aa12.67□□□□□ -0.38
HOXC6-201ENST00000243108 ASIPP42127 132 aa12.67□□□□□ -0.38
HOXC6-201ENST00000243108 AMTNQ6UX39 209 aa12.67□□□□□ -0.38
HOXC6-201ENST00000243108 PRELID3AQ96N28 172 aa12.67□□□□□ -0.38
HOXC6-201ENST00000243108 SPAG8Q99932 426 aaPredicted RBP12.67□□□□□ -0.38
HOXC6-201ENST00000243108 TSPOP30536 169 aa12.66□□□□□ -0.38
HOXC6-201ENST00000243108 ODF3L2Q3SX64 289 aa12.66□□□□□ -0.38
HOXC6-201ENST00000243108 DNAH1Q9P2D7 4330 aa12.66□□□□□ -0.38
HOXC6-201ENST00000243108 PPBPP02775 128 aa12.65□□□□□ -0.38
HOXC6-201ENST00000243108 TDRG1Q3Y452 100 aa12.65□□□□□ -0.38
HOXC6-201ENST00000243108 PLECQ15149 4684 aaKnown RBP12.65□□□□□ -0.38
HOXC6-201ENST00000243108 M0R2Z0 102 aa12.65□□□□□ -0.38
HOXC6-201ENST00000243108 SCGB1D1O95968 90 aa12.65□□□□□ -0.38
HOXC6-201ENST00000243108 CKS2P33552 79 aa12.65□□□□□ -0.38
HOXC6-201ENST00000243108 CDKN1BP46527 198 aa12.65□□□□□ -0.38
HOXC6-201ENST00000243108 DEFB131AP59861 70 aa12.65□□□□□ -0.38
HOXC6-201ENST00000243108 SPANXN1Q5VSR9 72 aa12.65□□□□□ -0.38
HOXC6-201ENST00000243108 TRAV12-3A0A0B4J271 114 aa12.64□□□□□ -0.39
HOXC6-201ENST00000243108 GNRH2O43555 120 aa12.64□□□□□ -0.39
HOXC6-201ENST00000243108 RNASE3P12724 160 aaKnown RBP12.64□□□□□ -0.39
HOXC6-201ENST00000243108 HLA-DRB4P13762 266 aa12.64□□□□□ -0.39
HOXC6-201ENST00000243108 S100A4P26447 101 aaKnown RBP12.64□□□□□ -0.39
HOXC6-201ENST00000243108 SMIM15Q7Z3B0 74 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms