RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 KLF2Q9Y5W3 355 aaPredicted RBP11.65□□□□□ -0.54
SPTLC2-201ENST00000216484 G3V318 75 aa11.65□□□□□ -0.55
SPTLC2-201ENST00000216484 J3QRE1 110 aa11.65□□□□□ -0.55
SPTLC2-201ENST00000216484 CRYGBP07316 175 aa11.65□□□□□ -0.55
SPTLC2-201ENST00000216484 TRBV12-3P01733 135 aa11.64□□□□□ -0.55
SPTLC2-201ENST00000216484 FAM110AQ9BQ89 295 aa11.64□□□□□ -0.55
SPTLC2-201ENST00000216484 PRR25Q96S07 402 aa11.64□□□□□ -0.55
SPTLC2-201ENST00000216484 DOPEY1Q5JWR5 2465 aa11.64□□□□□ -0.55
SPTLC2-201ENST00000216484 GATA3P23771 443 aa11.64□□□□□ -0.55
SPTLC2-201ENST00000216484 ABCA2Q9BZC7 2435 aa11.64□□□□□ -0.55
SPTLC2-201ENST00000216484 LTAP01374 205 aa11.64□□□□□ -0.55
SPTLC2-201ENST00000216484 Q6P435 159 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 TRBV19A0A075B6N1 114 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 EPOPA6NHQ4 379 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 USP17L23D6RBM5 183 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 IGKV1D-17A0A075B6S4 117 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 ADAMTS7Q9UKP4 1686 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 GGNQ86UU5 652 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 C20orf78Q9BR46 151 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 TRAV23DV6A0A075B6W5 121 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 PCP2Q8IVA1 136 aa11.63□□□□□ -0.55
SPTLC2-201ENST00000216484 ZFP36L1Q07352 338 aaKnown RBP11.62□□□□□ -0.55
SPTLC2-201ENST00000216484 TMEM256-PLSCR3K7ERE1 68 aa11.62□□□□□ -0.55
SPTLC2-201ENST00000216484 EIF4EBP2Q13542 120 aaPredicted RBP11.62□□□□□ -0.55
SPTLC2-201ENST00000216484 MESP1Q9BRJ9 268 aa11.62□□□□□ -0.55
SPTLC2-201ENST00000216484 V9GYY9 64 aa11.62□□□□□ -0.55
SPTLC2-201ENST00000216484 GYPEP15421 78 aa11.62□□□□□ -0.55
SPTLC2-201ENST00000216484 LYPD6Q86Y78 171 aa11.62□□□□□ -0.55
SPTLC2-201ENST00000216484 CCL18P55774 89 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 LINC01620Q4KN68 170 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 FOXI2Q6ZQN5 318 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 IGHV3-30P01768 117 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 IGHV3-33P01772 117 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 IGHV3-30-3P0DP02 117 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 IGHV3-30-5P0DP03 117 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 GNRH2O43555 120 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 NDUFA4O00483 81 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 DAND5Q8N907 189 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 H0YGX0 51 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 ADCYAP1P18509 176 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 PYGO2Q9BRQ0 406 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 V9GYV3 84 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 RAI1Q7Z5J4 1906 aaPredicted RBP11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 FAM208BQ5VWN6 2430 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 IGHV2-70P01814 119 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 CRYGSP22914 178 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 FANCD2OSQ96PS1 177 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 LINC01545Q5VT33 79 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 C17orf77Q96MU5 243 aa11.61□□□□□ -0.55
SPTLC2-201ENST00000216484 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
SPTLC2-201ENST00000216484 WI2-2373I1.2A0A1W2PRP0 233 aa11.6□□□□□ -0.55
SPTLC2-201ENST00000216484 IGHV4-59P01825 116 aa11.6□□□□□ -0.55
SPTLC2-201ENST00000216484 VOPP1Q96AW1 172 aa11.6□□□□□ -0.55
SPTLC2-201ENST00000216484 LGALS9O00182 355 aa11.6□□□□□ -0.55
SPTLC2-201ENST00000216484 LYPD3O95274 346 aa11.6□□□□□ -0.55
SPTLC2-201ENST00000216484 C9JQL5 133 aa11.6□□□□□ -0.55
SPTLC2-201ENST00000216484 FOXI1Q12951 378 aa11.6□□□□□ -0.55
SPTLC2-201ENST00000216484 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
SPTLC2-201ENST00000216484 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
SPTLC2-201ENST00000216484 COL18A1P39060 1754 aa11.59□□□□□ -0.55
SPTLC2-201ENST00000216484 DAZ2Q13117 558 aaKnown RBP11.59□□□□□ -0.55
SPTLC2-201ENST00000216484 ARTNQ5T4W7 220 aa11.59□□□□□ -0.55
SPTLC2-201ENST00000216484 DAZ4Q86SG3 579 aaKnown RBP11.59□□□□□ -0.55
SPTLC2-201ENST00000216484 DAZ3Q9NR90 486 aaKnown RBP11.59□□□□□ -0.55
SPTLC2-201ENST00000216484 NDUFA4L2Q9NRX3 87 aa11.59□□□□□ -0.55
SPTLC2-201ENST00000216484 UPK3BQ9BT76 320 aa11.59□□□□□ -0.55
SPTLC2-201ENST00000216484 IGKV2D-26A0A0A0MRZ7 120 aa11.58□□□□□ -0.56
SPTLC2-201ENST00000216484 IGHV1-69DA0A0B4J2H0 117 aa11.58□□□□□ -0.56
SPTLC2-201ENST00000216484 IGHV1-69P01742 117 aa11.58□□□□□ -0.56
SPTLC2-201ENST00000216484 GPR179Q6PRD1 2367 aa11.58□□□□□ -0.56
SPTLC2-201ENST00000216484 LRP4O75096 1905 aa11.58□□□□□ -0.56
SPTLC2-201ENST00000216484 IGLV3-32A0A0A0MS00 114 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 NPBQ8NG41 125 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 ZNF581Q9P0T4 197 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 TRBV10-2A0A0K0K1G8 114 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 Q6ZRM9 215 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 CCL24O00175 119 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 RBAKDNA6NC62 111 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 WISP1O95388 367 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 Q0VFX4 171 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 E7EQL1 145 aa11.57□□□□□ -0.56
SPTLC2-201ENST00000216484 JMJD7-PLA2G4BH0Y9G9 81 aa11.56□□□□□ -0.56
SPTLC2-201ENST00000216484 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
SPTLC2-201ENST00000216484 A0A0J9YWU9 116 aa11.56□□□□□ -0.56
SPTLC2-201ENST00000216484 PTPRSQ13332 1948 aa11.56□□□□□ -0.56
SPTLC2-201ENST00000216484 H3BRN7 92 aa11.56□□□□□ -0.56
SPTLC2-201ENST00000216484 IGHV7-4-1A0A0J9YVY3 117 aa11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 FAM240AA0A1B0GVK7 77 aa11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 TRBV6-6A0A0A6YYG2 114 aa11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 Q6ZVH6 145 aa11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 A4D1N5 150 aa11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 CLEC2BQ92478 149 aa11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 F8W735 103 aaPredicted RBP11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 TEN1Q86WV5 123 aa11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 DIRC1Q969H9 104 aa11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 A6NED7 52 aa11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.55□□□□□ -0.56
SPTLC2-201ENST00000216484 IGLV3-12A0A075B6K2 115 aa11.54□□□□□ -0.56
SPTLC2-201ENST00000216484 C5orf63A6NC05 138 aa11.54□□□□□ -0.56
SPTLC2-201ENST00000216484 LRCOL1A6NCL2 159 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms