RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
TGFBR3-201ENST00000212355 RIF1Q5UIP0 2472 aaKnown RBP10.61□□□□□ -0.71
TGFBR3-201ENST00000212355 CCL24O00175 119 aa10.61□□□□□ -0.71
TGFBR3-201ENST00000212355 RHODO00212 210 aa10.61□□□□□ -0.71
TGFBR3-201ENST00000212355 ANKRD39Q53RE8 183 aa10.61□□□□□ -0.71
TGFBR3-201ENST00000212355 NPBQ8NG41 125 aa10.61□□□□□ -0.71
TGFBR3-201ENST00000212355 IGKV3D-7A0A0C4DH55 119 aa10.61□□□□□ -0.71
TGFBR3-201ENST00000212355 ETV2O00321 342 aaPredicted RBP10.61□□□□□ -0.71
TGFBR3-201ENST00000212355 OBSL1O75147 1896 aa10.6□□□□□ -0.71
TGFBR3-201ENST00000212355 PATE2Q6UY27 113 aa10.6□□□□□ -0.71
TGFBR3-201ENST00000212355 AJUBAQ96IF1 538 aa10.6□□□□□ -0.71
TGFBR3-201ENST00000212355 COL4A3Q01955 1670 aa10.6□□□□□ -0.71
TGFBR3-201ENST00000212355 LHBP01229 141 aa10.6□□□□□ -0.71
TGFBR3-201ENST00000212355 BAALC-AS2P0C853 105 aa10.6□□□□□ -0.71
TGFBR3-201ENST00000212355 UBL5Q9BZL1 73 aa10.6□□□□□ -0.71
TGFBR3-201ENST00000212355 GTSF1Q8WW33 167 aa10.6□□□□□ -0.71
TGFBR3-201ENST00000212355 TP73-AS1Q9UF72 201 aa10.6□□□□□ -0.71
TGFBR3-201ENST00000212355 OPRPNQ99935 248 aaPredicted RBP10.59□□□□□ -0.71
TGFBR3-201ENST00000212355 TRAV4A0A0B4J268 109 aa10.59□□□□□ -0.71
TGFBR3-201ENST00000212355 CLPSL1A2RUU4 121 aa10.59□□□□□ -0.71
TGFBR3-201ENST00000212355 TRBV12-3P01733 135 aa10.59□□□□□ -0.71
TGFBR3-201ENST00000212355 MUSTN1Q8IVN3 82 aa10.59□□□□□ -0.71
TGFBR3-201ENST00000212355 TANC1Q9C0D5 1861 aa10.59□□□□□ -0.71
TGFBR3-201ENST00000212355 UBE2BP63146 152 aa10.59□□□□□ -0.71
TGFBR3-201ENST00000212355 LINC00311Q8N616 119 aa10.59□□□□□ -0.71
TGFBR3-201ENST00000212355 PLCE1Q9P212 2302 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 B5MCH6 92 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 TRACP01848 142 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 APOC4P55056 127 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 PLA2G2CQ5R387 149 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 MRPL36Q9P0J6 103 aaKnown RBP10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 IGHV7-81A0A0B4J1V7 117 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 HERVK_113P63121 156 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 GYPEP15421 78 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 GPR179Q6PRD1 2367 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 IGHV4OR15-8A0A075B7B6 117 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 A0A087WW49 117 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 CENPVL3A0A0U1RRI6 287 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 UTF1Q5T230 341 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 ANKRD29Q8N6D5 301 aa10.58□□□□□ -0.72
TGFBR3-201ENST00000212355 IL15RAQ13261 267 aa10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 MRPL52Q86TS9 123 aaKnown RBP10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 A0A0J9YXV3 536 aa10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 I3L2K1 104 aa10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 IGFL3Q6UXB1 125 aa10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 ZNF493Q6ZR52 646 aa10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 C5orf47Q569G3 176 aa10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 C11orf52Q96A22 123 aa10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 DSCAML1Q8TD84 2053 aa10.57□□□□□ -0.72
TGFBR3-201ENST00000212355 BUB3O43684 328 aa10.56□□□□□ -0.72
TGFBR3-201ENST00000212355 CLEC2BQ92478 149 aa10.56□□□□□ -0.72
TGFBR3-201ENST00000212355 K7EIM0 57 aa10.56□□□□□ -0.72
TGFBR3-201ENST00000212355 GP9P14770 177 aa10.56□□□□□ -0.72
TGFBR3-201ENST00000212355 COX7B2Q8TF08 81 aa10.56□□□□□ -0.72
TGFBR3-201ENST00000212355 MED13LQ71F56 2210 aa10.56□□□□□ -0.72
TGFBR3-201ENST00000212355 TEX48A0A1B0GUV7 120 aa10.56□□□□□ -0.72
TGFBR3-201ENST00000212355 ZFP36P26651 326 aaKnown RBP10.56□□□□□ -0.72
TGFBR3-201ENST00000212355 DKK4Q9UBT3 224 aa10.56□□□□□ -0.72
TGFBR3-201ENST00000212355 CFC1BP0CG36 223 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 CFC1P0CG37 223 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 GATA3P23771 443 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 SPATA25Q9BR10 227 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 P0DMU3 169 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 FAM231AP0DMU4 169 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 FAM231CP0DMU5 169 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 FXYD2P54710 66 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 TRAV13-2A0A0B4J235 113 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 FOXI2Q6ZQN5 318 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 TIMM17AQ99595 171 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 IGLV2-14P01704 120 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 Q8N1Y9 231 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 VPREB3Q9UKI3 123 aa10.55□□□□□ -0.72
TGFBR3-201ENST00000212355 INAFM2P0DMQ5 153 aa10.54□□□□□ -0.72
TGFBR3-201ENST00000212355 WFDC2Q14508 124 aa10.54□□□□□ -0.72
TGFBR3-201ENST00000212355 PYGO2Q9BRQ0 406 aa10.54□□□□□ -0.72
TGFBR3-201ENST00000212355 NBL1P41271 181 aa10.54□□□□□ -0.72
TGFBR3-201ENST00000212355 ZFP2Q6ZN57 461 aa10.54□□□□□ -0.72
TGFBR3-201ENST00000212355 C20orf78Q9BR46 151 aa10.53□□□□□ -0.72
TGFBR3-201ENST00000212355 PRSS47A8MTI9 375 aa10.53□□□□□ -0.72
TGFBR3-201ENST00000212355 A4D1N5 150 aa10.53□□□□□ -0.72
TGFBR3-201ENST00000212355 CTSGP08311 255 aa10.53□□□□□ -0.72
TGFBR3-201ENST00000212355 PIFOQ8TCI5 191 aa10.53□□□□□ -0.72
TGFBR3-201ENST00000212355 SPTAN1Q13813 2472 aaKnown RBP10.53□□□□□ -0.72
TGFBR3-201ENST00000212355 A0A1W2PNU3 283 aaPredicted RBP10.52□□□□□ -0.72
TGFBR3-201ENST00000212355 IGLL5B9A064 214 aa10.52□□□□□ -0.73
TGFBR3-201ENST00000212355 RBM3P98179 157 aaKnown RBP10.52□□□□□ -0.73
TGFBR3-201ENST00000212355 HIST2H2BCQ6DN03 193 aa10.52□□□□□ -0.73
TGFBR3-201ENST00000212355 TP53TG3Q9ULZ0 132 aa10.52□□□□□ -0.73
TGFBR3-201ENST00000212355 IGKV1-17P01599 117 aa10.52□□□□□ -0.73
TGFBR3-201ENST00000212355 RHOHQ15669 191 aa10.52□□□□□ -0.73
TGFBR3-201ENST00000212355 SLC25A29Q8N8R3 303 aa10.52□□□□□ -0.73
TGFBR3-201ENST00000212355 LYPD6BQ8NI32 183 aa10.52□□□□□ -0.73
TGFBR3-201ENST00000212355 NUP210Q8TEM1 1887 aaPredicted RBP10.51□□□□□ -0.73
TGFBR3-201ENST00000212355 LOXL1Q08397 574 aaPredicted RBP10.51□□□□□ -0.73
TGFBR3-201ENST00000212355 K7EQD1 137 aa10.51□□□□□ -0.73
TGFBR3-201ENST00000212355 BAALCQ8WXS3 180 aa10.51□□□□□ -0.73
TGFBR3-201ENST00000212355 PTH2Q96A98 100 aa10.51□□□□□ -0.73
TGFBR3-201ENST00000212355 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
TGFBR3-201ENST00000212355 MALRD1Q5VYJ5 2156 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms