RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 LOXP28300 417 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 ZNF362Q5T0B9 420 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 DEFB125Q8N687 156 aa14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 TNRC6BQ9UPQ9 1833 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 LECT2O14960 151 aa14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 FOXI1Q12951 378 aa14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 C1orf194Q5T5A4 169 aa14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 HHLA3Q9XRX5 114 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 TRBV19A0A075B6N1 114 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 PRSS46E5RG02 174 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 MRPL35Q9NZE8 188 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 CACNA1EQ15878 2313 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 COX7A2LO14548 114 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 K7EQD1 137 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 NDUFB1O75438 58 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 LY6G6CO95867 125 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 NPYP01303 97 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 SLAQ13239 276 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 GAGE12HA6NDE8 117 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 TEX22C9J3V5 150 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 LYPD1Q8N2G4 141 aa14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 MRPL36Q9P0J6 103 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-227ENST00000636549 ZNF833PQ6ZTB9 187 aa14.03□□□□□ -0.16
CACNA1A-227ENST00000636549 DKK2Q9UBU2 259 aa14.03□□□□□ -0.16
CACNA1A-227ENST00000636549 FBLN5Q9UBX5 448 aa14.03□□□□□ -0.16
CACNA1A-227ENST00000636549 HELZP42694 1942 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-227ENST00000636549 WDR81Q562E7 1941 aa14.03□□□□□ -0.16
CACNA1A-227ENST00000636549 INAFM1C9JVW0 142 aa14.03□□□□□ -0.16
CACNA1A-227ENST00000636549 IGHV2-5P01817 119 aa14.03□□□□□ -0.16
CACNA1A-227ENST00000636549 A0A0G2JMZ2 1700 aa14.03□□□□□ -0.16
CACNA1A-227ENST00000636549 LRRC37A2A6NM11 1700 aa14.03□□□□□ -0.16
CACNA1A-227ENST00000636549 ATP5G1P05496 136 aa14.02□□□□□ -0.16
CACNA1A-227ENST00000636549 BAALC-AS2P0C853 105 aa14.02□□□□□ -0.16
CACNA1A-227ENST00000636549 MRPL23Q16540 153 aaKnown RBP14.02□□□□□ -0.16
CACNA1A-227ENST00000636549 SMAD5-AS1Q9Y6J3 95 aa14.02□□□□□ -0.16
CACNA1A-227ENST00000636549 NDUFA4L2Q9NRX3 87 aa14.02□□□□□ -0.17
CACNA1A-227ENST00000636549 ETV2O00321 342 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-227ENST00000636549 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
CACNA1A-227ENST00000636549 H3BRN7 92 aa14.01□□□□□ -0.17
CACNA1A-227ENST00000636549 TMEM14EPQ6UXP3 125 aa14.01□□□□□ -0.17
CACNA1A-227ENST00000636549 CASC2Q6XLA1 102 aa14.01□□□□□ -0.17
CACNA1A-227ENST00000636549 FAM231DQ6ZW35 169 aa14.01□□□□□ -0.17
CACNA1A-227ENST00000636549 VOPP1Q96AW1 172 aa14.01□□□□□ -0.17
CACNA1A-227ENST00000636549 FUSP35637 526 aaKnown RBP eCLIP14□□□□□ -0.17
CACNA1A-227ENST00000636549 FOXI2Q6ZQN5 318 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 HEATR5AQ86XA9 2040 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 IGKV1-17P01599 117 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 MYLKQ15746 1914 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 SIGLEC8Q9NYZ4 499 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 NCKAP5O14513 1909 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 PRR20EP86478 221 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 PRR20CP86479 221 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 PRR20DP86480 221 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 PRR20BP86481 221 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 PRR20AP86496 221 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 C16orf74Q96GX8 76 aa14□□□□□ -0.17
CACNA1A-227ENST00000636549 VSIG2Q96IQ7 327 aa13.99□□□□□ -0.17
CACNA1A-227ENST00000636549 CYTL1Q9NRR1 136 aa13.99□□□□□ -0.17
CACNA1A-227ENST00000636549 FAM186AA6NE01 2351 aa13.99□□□□□ -0.17
CACNA1A-227ENST00000636549 A0A087WZ39 114 aa13.99□□□□□ -0.17
CACNA1A-227ENST00000636549 DENND4AQ7Z401 1863 aa13.99□□□□□ -0.17
CACNA1A-227ENST00000636549 H3BMG7 143 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 HIGD2AQ9BW72 106 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 CEND1Q8N111 149 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 SLC25A29Q8N8R3 303 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 IGHV4-30-4P0DP06 118 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 IGHV4-31P0DP07 118 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 AJUBAQ96IF1 538 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 J3QQQ9 107 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 MPZP25189 248 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 ZNF407Q9C0G0 2248 aa13.98□□□□□ -0.17
CACNA1A-227ENST00000636549 SPTA1P02549 2419 aa13.97□□□□□ -0.17
CACNA1A-227ENST00000636549 WT1P19544 449 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-227ENST00000636549 LOC105371267A0A1B0GV96 52 aa13.97□□□□□ -0.17
CACNA1A-227ENST00000636549 TMEM258P61165 79 aa13.97□□□□□ -0.17
CACNA1A-227ENST00000636549 NCOR1O75376 2440 aa13.97□□□□□ -0.17
CACNA1A-227ENST00000636549 WT1-ASQ06250 92 aa13.97□□□□□ -0.17
CACNA1A-227ENST00000636549 C11orf45Q8TAV5 145 aa13.97□□□□□ -0.17
CACNA1A-227ENST00000636549 TRBV20-1A0A075B6N2 111 aa13.96□□□□□ -0.17
CACNA1A-227ENST00000636549 J3QRE1 110 aa13.96□□□□□ -0.17
CACNA1A-227ENST00000636549 IFITM1P13164 125 aa13.96□□□□□ -0.17
CACNA1A-227ENST00000636549 CSRP3P50461 194 aa13.96□□□□□ -0.17
CACNA1A-227ENST00000636549 RBAKDNA6NC62 111 aa13.96□□□□□ -0.18
CACNA1A-227ENST00000636549 ANKRD29Q8N6D5 301 aa13.95□□□□□ -0.18
CACNA1A-227ENST00000636549 CENPVL3A0A0U1RRI6 287 aa13.95□□□□□ -0.18
CACNA1A-227ENST00000636549 LTBP1Q14766 1721 aa13.95□□□□□ -0.18
CACNA1A-227ENST00000636549 YPEL3P61236 119 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-227ENST00000636549 Q8NFD4 153 aa13.95□□□□□ -0.18
CACNA1A-227ENST00000636549 UBE2D4Q9Y2X8 147 aa13.95□□□□□ -0.18
CACNA1A-227ENST00000636549 UBE2D1P51668 147 aa13.95□□□□□ -0.18
CACNA1A-227ENST00000636549 ZFP2Q6ZN57 461 aa13.95□□□□□ -0.18
CACNA1A-227ENST00000636549 FAM215AQ9Y5M1 114 aa13.95□□□□□ -0.18
CACNA1A-227ENST00000636549 PDE6HQ13956 83 aa13.94□□□□□ -0.18
CACNA1A-227ENST00000636549 SPINK6Q6UWN8 80 aa13.94□□□□□ -0.18
CACNA1A-227ENST00000636549 B9D2Q9BPU9 175 aa13.94□□□□□ -0.18
CACNA1A-227ENST00000636549 MPLKIPQ8TAP9 179 aa13.94□□□□□ -0.18
CACNA1A-227ENST00000636549 SIRPDQ9H106 197 aa13.94□□□□□ -0.18
CACNA1A-227ENST00000636549 KIAA1671Q9BY89 1806 aa13.94□□□□□ -0.18
CACNA1A-227ENST00000636549 PRO1854Q9UHT4 67 aa13.94□□□□□ -0.18
CACNA1A-227ENST00000636549 IGLL1P15814 213 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms