RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 NPFFO15130 113 aa9.64□□□□□ -0.87
MATR3-227ENST00000618441 SPRY2O43597 315 aa9.64□□□□□ -0.87
MATR3-227ENST00000618441 LGALS1P09382 135 aaKnown RBP9.64□□□□□ -0.87
MATR3-227ENST00000618441 KLF14Q8TD94 323 aaPredicted RBP9.64□□□□□ -0.87
MATR3-227ENST00000618441 DEFB127Q9H1M4 99 aa9.64□□□□□ -0.87
MATR3-227ENST00000618441 TRBV7-3A0A075B6L6 115 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 PRSS2P07478 247 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 OTORQ9NRC9 128 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 CTSZQ9UBR2 303 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 C15orf65H3BRN8 121 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 SPRY3O43610 288 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 WT1-ASQ06250 92 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 IGHV3-35A0A0C4DH35 117 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 TMEM170BQ5T4T1 132 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 RUSC1-AS1Q66K80 236 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 DNAJC30Q96LL9 226 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 TMEM133Q9H2Q1 129 aa9.63□□□□□ -0.87
MATR3-227ENST00000618441 TRGV11A0A075B6L2 103 aa9.62□□□□□ -0.87
MATR3-227ENST00000618441 DEFB109BQ30KR1 87 aa9.62□□□□□ -0.87
MATR3-227ENST00000618441 C2orf82Q6UX34 121 aa9.62□□□□□ -0.87
MATR3-227ENST00000618441 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
MATR3-227ENST00000618441 NXT2Q9NPJ8 142 aaKnown RBP9.62□□□□□ -0.87
MATR3-227ENST00000618441 HERVK_113P63121 156 aa9.62□□□□□ -0.87
MATR3-227ENST00000618441 PLGLAQ15195 96 aa9.62□□□□□ -0.87
MATR3-227ENST00000618441 MRPL20Q9BYC9 149 aaKnown RBP9.62□□□□□ -0.87
MATR3-227ENST00000618441 CRIP1P50238 77 aa9.62□□□□□ -0.87
MATR3-227ENST00000618441 KLRB1Q12918 225 aa9.62□□□□□ -0.87
MATR3-227ENST00000618441 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
MATR3-227ENST00000618441 TRAV12-3A0A0B4J271 114 aa9.61□□□□□ -0.87
MATR3-227ENST00000618441 CXXC4Q9H2H0 198 aa9.61□□□□□ -0.87
MATR3-227ENST00000618441 ZNF292O60281 2723 aa9.61□□□□□ -0.87
MATR3-227ENST00000618441 PINLYPA6NC86 204 aa9.61□□□□□ -0.87
MATR3-227ENST00000618441 ASIPP42127 132 aa9.61□□□□□ -0.87
MATR3-227ENST00000618441 NPC2P61916 151 aa9.61□□□□□ -0.87
MATR3-227ENST00000618441 COL12A1Q99715 3063 aa9.61□□□□□ -0.87
MATR3-227ENST00000618441 A8MZ25 164 aa9.61□□□□□ -0.87
MATR3-227ENST00000618441 CDX4O14627 284 aaPredicted RBP9.61□□□□□ -0.87
MATR3-227ENST00000618441 TRAV41A0A0B4J266 112 aa9.6□□□□□ -0.87
MATR3-227ENST00000618441 RPL13AP40429 203 aaKnown RBP9.6□□□□□ -0.87
MATR3-227ENST00000618441 GATD1Q8NB37 220 aa9.6□□□□□ -0.87
MATR3-227ENST00000618441 ZFYVE26Q68DK2 2539 aa9.6□□□□□ -0.87
MATR3-227ENST00000618441 AKAP13Q12802 2813 aa9.6□□□□□ -0.87
MATR3-227ENST00000618441 PTPN13Q12923 2485 aa9.6□□□□□ -0.87
MATR3-227ENST00000618441 H3BMM0 161 aa9.6□□□□□ -0.87
MATR3-227ENST00000618441 B3GALT5-AS1P59052 145 aa9.6□□□□□ -0.87
MATR3-227ENST00000618441 UBE2WQ96B02 151 aa9.6□□□□□ -0.87
MATR3-227ENST00000618441 ARHGAP32A7KAX9 2087 aa9.6□□□□□ -0.87
MATR3-227ENST00000618441 LAGE3Q14657 143 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 H7C1H1 209 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 GAGE2AQ6NT46 116 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 NDUFA11Q86Y39 141 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 RASL10AQ92737 203 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 CCL13Q99616 98 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 ZNF71Q9NQZ8 489 aaPredicted RBP9.59□□□□□ -0.87
MATR3-227ENST00000618441 IGKV1D-37A0A075B6S9 117 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 MRPS12O15235 138 aaKnown RBP9.59□□□□□ -0.87
MATR3-227ENST00000618441 MYCNOSP40205 109 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 PRO1854Q9UHT4 67 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 EGR2P11161 476 aaPredicted RBP9.59□□□□□ -0.87
MATR3-227ENST00000618441 PLNP26678 52 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 PSMG4Q5JS54 123 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 SPANXN1Q5VSR9 72 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 TPSG1Q9NRR2 321 aa9.59□□□□□ -0.87
MATR3-227ENST00000618441 GP9P14770 177 aa9.58□□□□□ -0.88
MATR3-227ENST00000618441 THBDP07204 575 aa9.58□□□□□ -0.88
MATR3-227ENST00000618441 MGPP08493 103 aa9.58□□□□□ -0.88
MATR3-227ENST00000618441 MALP21145 153 aa9.58□□□□□ -0.88
MATR3-227ENST00000618441 DLX1P56177 255 aa9.58□□□□□ -0.88
MATR3-227ENST00000618441 F8VRH5 84 aa9.58□□□□□ -0.88
MATR3-227ENST00000618441 PTPRBP23467 1997 aa9.57□□□□□ -0.88
MATR3-227ENST00000618441 IGKV1D-17A0A075B6S4 117 aa9.57□□□□□ -0.88
MATR3-227ENST00000618441 IGLC6P0CF74 106 aa9.57□□□□□ -0.88
MATR3-227ENST00000618441 CD59P13987 128 aa9.57□□□□□ -0.88
MATR3-227ENST00000618441 CEMP1Q6PRD7 247 aaPredicted RBP9.57□□□□□ -0.88
MATR3-227ENST00000618441 EEF1AKMT3Q96AZ1 226 aa9.57□□□□□ -0.88
MATR3-227ENST00000618441 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.57□□□□□ -0.885e-8■■■■■ 30.6
MATR3-227ENST00000618441 COX6A1P12074 109 aa9.57□□□□□ -0.88
MATR3-227ENST00000618441 IGHV3OR16-13A0A075B7E8 117 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 IGHV3-74A0A0B4J1X5 117 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 RBAKDNA6NC62 111 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 LINC00527Q9UJ94 153 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 IGHV1-45A0A0A0MS14 117 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 TMEM101Q96IK0 257 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 PRO0628Q9UI54 55 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 LRP4O75096 1905 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 CREBBPQ92793 2442 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 IGLV2-11P01706 119 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 C11orf53Q8IXP5 236 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 FAM216BQ8N7L0 139 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 MDS2Q8NDY4 140 aa9.56□□□□□ -0.88
MATR3-227ENST00000618441 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 ODF3Q96PU9 254 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 NDUFA4L2Q9NRX3 87 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 TRAV8-3A0A0A6YYJ7 113 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 A0A1W2PNU3 283 aaPredicted RBP9.55□□□□□ -0.88
MATR3-227ENST00000618441 TRGV3P03979 118 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 Q6ZS46 218 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 RNF138Q8WVD3 245 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 COL5A1P20908 1838 aaPredicted RBP9.55□□□□□ -0.88
MATR3-227ENST00000618441 C10orf142B7Z368 130 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms