RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 NDUFV3P56181 108 aaKnown RBP11.56□□□□□ -0.56
SRRT-217ENST00000618411 PAPPA-AS1Q5QFB9 102 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 RNF182Q8N6D2 247 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 PRO1854Q9UHT4 67 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 SLC25A20O43772 301 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 GAGE7O76087 117 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 IGHV3-23P01764 117 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 GAGE12FP0CL80 117 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 GAGE12GP0CL81 117 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 GAGE12IP0CL82 117 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 HERVK_113P61574 105 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 GAGE4Q13068 117 aa11.56□□□□□ -0.56
SRRT-217ENST00000618411 CENPVL3A0A0U1RRI6 287 aa11.55□□□□□ -0.56
SRRT-217ENST00000618411 IGHV3-30P01768 117 aa11.55□□□□□ -0.56
SRRT-217ENST00000618411 IGHV3-30-5P0DP03 117 aa11.55□□□□□ -0.56
SRRT-217ENST00000618411 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.55□□□□□ -0.56
SRRT-217ENST00000618411 ZZEF1O43149 2961 aa11.55□□□□□ -0.56
SRRT-217ENST00000618411 SNCGO76070 127 aa11.55□□□□□ -0.56
SRRT-217ENST00000618411 SLC25A29Q8N8R3 303 aa11.55□□□□□ -0.56
SRRT-217ENST00000618411 HIF1ANQ9NWT6 349 aa11.55□□□□□ -0.56
SRRT-217ENST00000618411 Q6Q795 121 aa11.54□□□□□ -0.56
SRRT-217ENST00000618411 DYNLRB1Q9NP97 96 aa11.54□□□□□ -0.56
SRRT-217ENST00000618411 ZDBF2Q9HCK1 2354 aa11.54□□□□□ -0.56
SRRT-217ENST00000618411 BUB3O43684 328 aa11.54□□□□□ -0.56
SRRT-217ENST00000618411 PIP4P1Q86T03 277 aa11.53□□□□□ -0.56
SRRT-217ENST00000618411 PKDREJQ9NTG1 2253 aa11.53□□□□□ -0.56
SRRT-217ENST00000618411 DPM3Q9P2X0 92 aa11.53□□□□□ -0.56
SRRT-217ENST00000618411 TRAV8-2A0A0B4J237 113 aa11.53□□□□□ -0.56
SRRT-217ENST00000618411 TRBV7-9A0A0J9YWB2 115 aa11.53□□□□□ -0.56
SRRT-217ENST00000618411 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
SRRT-217ENST00000618411 FAM110AQ9BQ89 295 aa11.53□□□□□ -0.56
SRRT-217ENST00000618411 MSRB2Q9Y3D2 182 aa11.53□□□□□ -0.56
SRRT-217ENST00000618411 IGHV3OR16-8A0A075B7F1 116 aa11.53□□□□□ -0.56
SRRT-217ENST00000618411 CDX4O14627 284 aaPredicted RBP11.53□□□□□ -0.56
SRRT-217ENST00000618411 C11orf86A6NJI1 115 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 C9JAW5 83 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 M0R381 172 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 KALRNO60229 2985 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 TGFAP01135 160 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 CRYGDP07320 174 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 TTC32Q5I0X7 151 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 C9orf47Q6ZRZ4 202 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 SPANXA1Q9NS26 97 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 GPR179Q6PRD1 2367 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 IFITM1P13164 125 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 PRTN3P24158 256 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 DPH3P1Q9H4G8 78 aa11.52□□□□□ -0.57
SRRT-217ENST00000618411 TRAV4A0A0B4J268 109 aa11.51□□□□□ -0.57
SRRT-217ENST00000618411 RPL39LQ96EH5 51 aaKnown RBP11.51□□□□□ -0.57
SRRT-217ENST00000618411 TIMD4Q96H15 378 aa11.51□□□□□ -0.57
SRRT-217ENST00000618411 IGLV4-69A0A075B6H9 119 aa11.51□□□□□ -0.57
SRRT-217ENST00000618411 PPP1R17O96001 155 aa11.51□□□□□ -0.57
SRRT-217ENST00000618411 NDPQ00604 133 aa11.51□□□□□ -0.57
SRRT-217ENST00000618411 HES1Q14469 280 aa11.51□□□□□ -0.57
SRRT-217ENST00000618411 TNRC18O15417 2968 aaPredicted RBP11.51□□□□□ -0.57
SRRT-217ENST00000618411 IGHV1-69DA0A0B4J2H0 117 aa11.5□□□□□ -0.57
SRRT-217ENST00000618411 IGHV3-35A0A0C4DH35 117 aa11.5□□□□□ -0.57
SRRT-217ENST00000618411 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
SRRT-217ENST00000618411 Q6ZS46 218 aa11.5□□□□□ -0.57
SRRT-217ENST00000618411 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
SRRT-217ENST00000618411 RP1L1Q8IWN7 2480 aaPredicted RBP11.5□□□□□ -0.57
SRRT-217ENST00000618411 LINC01600Q96MT4 127 aa11.5□□□□□ -0.57
SRRT-217ENST00000618411 Q6ZQT7 251 aa11.5□□□□□ -0.57
SRRT-217ENST00000618411 LOC400499M0QZD8 3231 aa11.49□□□□□ -0.57
SRRT-217ENST00000618411 CCDC179H3BU77 68 aa11.49□□□□□ -0.57
SRRT-217ENST00000618411 CRLF1O75462 422 aa11.49□□□□□ -0.57
SRRT-217ENST00000618411 DUSP14O95147 198 aaKnown RBP11.49□□□□□ -0.57
SRRT-217ENST00000618411 P0DMU3 169 aa11.49□□□□□ -0.57
SRRT-217ENST00000618411 FAM231AP0DMU4 169 aa11.49□□□□□ -0.57
SRRT-217ENST00000618411 FAM231CP0DMU5 169 aa11.49□□□□□ -0.57
SRRT-217ENST00000618411 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
SRRT-217ENST00000618411 DEFB109BQ30KR1 87 aa11.49□□□□□ -0.57
SRRT-217ENST00000618411 Q8N1Y9 231 aa11.49□□□□□ -0.57
SRRT-217ENST00000618411 RAX2Q96IS3 184 aa11.49□□□□□ -0.57
SRRT-217ENST00000618411 TPRP12270 2363 aaKnown RBP11.48□□□□□ -0.57
SRRT-217ENST00000618411 IGHV3-33P01772 117 aa11.48□□□□□ -0.57
SRRT-217ENST00000618411 PMVKQ15126 192 aa11.48□□□□□ -0.57
SRRT-217ENST00000618411 ANXA2RQ3ZCQ2 193 aa11.48□□□□□ -0.57
SRRT-217ENST00000618411 LENEPQ9Y5L5 61 aa11.48□□□□□ -0.57
SRRT-217ENST00000618411 RPL32P62910 135 aaKnown RBP11.48□□□□□ -0.57
SRRT-217ENST00000618411 SHISA2Q6UWI4 295 aa11.48□□□□□ -0.57
SRRT-217ENST00000618411 WNK2Q9Y3S1 2297 aa11.48□□□□□ -0.57
SRRT-217ENST00000618411 TSHBP01222 138 aa11.47□□□□□ -0.57
SRRT-217ENST00000618411 HERV-K104P63124 156 aa11.47□□□□□ -0.57
SRRT-217ENST00000618411 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
SRRT-217ENST00000618411 C14orf178Q8N769 122 aaPredicted RBP11.47□□□□□ -0.57
SRRT-217ENST00000618411 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
SRRT-217ENST00000618411 IGIPA6NJ69 53 aa11.47□□□□□ -0.57
SRRT-217ENST00000618411 RPL13AP40429 203 aaKnown RBP11.47□□□□□ -0.57
SRRT-217ENST00000618411 TSPEAR-AS2P59090 65 aa11.47□□□□□ -0.57
SRRT-217ENST00000618411 FAM57AQ8TBR7 257 aa11.47□□□□□ -0.57
SRRT-217ENST00000618411 AMELXQ99217 191 aa11.47□□□□□ -0.57
SRRT-217ENST00000618411 LY6G5BQ8NDX9 201 aa11.46□□□□□ -0.57
SRRT-217ENST00000618411 CLPSL1A2RUU4 121 aa11.46□□□□□ -0.57
SRRT-217ENST00000618411 A4D1N5 150 aa11.46□□□□□ -0.57
SRRT-217ENST00000618411 E7EQL1 145 aa11.46□□□□□ -0.57
SRRT-217ENST00000618411 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
SRRT-217ENST00000618411 TMEM141Q96I45 108 aa11.46□□□□□ -0.57
SRRT-217ENST00000618411 A0A0B4J2C4 111 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms