RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 C16orf92Q96LL3 132 aa13.25□□□□□ -0.29
CNOT3-209ENST00000617930 RHPN1-AS1Q9BWJ2 59 aa13.25□□□□□ -0.29
CNOT3-209ENST00000617930 TP73-AS1Q9UF72 201 aa13.25□□□□□ -0.29
CNOT3-209ENST00000617930 FBLL1A6NHQ2 334 aaKnown RBP13.25□□□□□ -0.29
CNOT3-209ENST00000617930 SLC25A34Q6PIV7 304 aa13.25□□□□□ -0.29
CNOT3-209ENST00000617930 ZNF493Q6ZR52 646 aa13.25□□□□□ -0.29
CNOT3-209ENST00000617930 OR10AG1Q8NH19 301 aa13.25□□□□□ -0.29
CNOT3-209ENST00000617930 HIVEP2P31629 2446 aa13.24□□□□□ -0.29
CNOT3-209ENST00000617930 MUC21A0A0G2JKD1 596 aa13.24□□□□□ -0.29
CNOT3-209ENST00000617930 MUC21A0A140T8X8 626 aa13.24□□□□□ -0.29
CNOT3-209ENST00000617930 MUC21Q5SSG8 566 aa13.24□□□□□ -0.29
CNOT3-209ENST00000617930 MYOZ3Q8TDC0 251 aa13.24□□□□□ -0.29
CNOT3-209ENST00000617930 MRPL53Q96EL3 112 aaKnown RBP13.24□□□□□ -0.29
CNOT3-209ENST00000617930 MCRIP2Q9BUT9 160 aaKnown RBP13.24□□□□□ -0.29
CNOT3-209ENST00000617930 C11orf21Q9P2W6 132 aa13.24□□□□□ -0.29
CNOT3-209ENST00000617930 ZNF738Q8NE65 137 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 DAZ1Q9NQZ3 744 aaKnown RBP13.23□□□□□ -0.29
CNOT3-209ENST00000617930 SMPXQ9UHP9 88 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 IGKV3-7A0A075B6H7 116 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 TMEM213A2RRL7 107 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 TMEM89A2RUT3 159 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 CYSRT1A8MQ03 144 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 D6R8Y8 96 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 LINC01545Q5VT33 79 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 C9orf47Q6ZRZ4 202 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 SCRT2Q9NQ03 307 aa13.23□□□□□ -0.29
CNOT3-209ENST00000617930 SRD5A1P18405 259 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 PMCHL2Q9BQD1 86 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 MS4A6AQ9H2W1 248 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 NSD1Q96L73 2696 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-209ENST00000617930 LOC389332A0A1B0GUA5 103 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 IFI27P40305 119 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-209ENST00000617930 PRR9Q5T870 116 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 HIST2H2BDQ6DRA6 164 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 C18orf65Q6ZTR6 163 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 Q6ZVH6 145 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 AMN1Q8IY45 258 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 Q8N2B8 174 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 PRELID3AQ96N28 172 aa13.22□□□□□ -0.29
CNOT3-209ENST00000617930 SETXQ7Z333 2677 aaKnown RBP13.21□□□□□ -0.29
CNOT3-209ENST00000617930 IGKV3D-20A0A0C4DH25 116 aa13.21□□□□□ -0.29
CNOT3-209ENST00000617930 PTTG1IPP53801 180 aa13.21□□□□□ -0.29
CNOT3-209ENST00000617930 RPS20P60866 119 aaKnown RBP13.21□□□□□ -0.29
CNOT3-209ENST00000617930 FAM104BQ5XKR9 115 aa13.21□□□□□ -0.29
CNOT3-209ENST00000617930 ORMDL3Q8N138 153 aa13.21□□□□□ -0.29
CNOT3-209ENST00000617930 ZNF747Q9BV97 191 aa13.21□□□□□ -0.29
CNOT3-209ENST00000617930 FN1P02751 2386 aaKnown RBP13.21□□□□□ -0.29
CNOT3-209ENST00000617930 K7EMT4 169 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 IGLC6P0CF74 106 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 BMI1P35226 326 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 FOXE3Q13461 319 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 MPV17L2Q567V2 206 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 FABP5P3A8MUU1 101 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 F6UB75 175 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 RPL11P62913 178 aaKnown RBP13.2□□□□□ -0.3
CNOT3-209ENST00000617930 Q6ZSV7 163 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 TMEM86BQ8N661 226 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 TEX29Q8N6K0 151 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 RNF152Q8N8N0 203 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 TMEM160Q9NX00 188 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 SIGLEC8Q9NYZ4 499 aa13.2□□□□□ -0.3
CNOT3-209ENST00000617930 IGHV4OR15-8A0A075B7B6 117 aa13.19□□□□□ -0.3
CNOT3-209ENST00000617930 A0A087WW49 117 aa13.19□□□□□ -0.3
CNOT3-209ENST00000617930 TMEM78Q5T7P6 136 aa13.19□□□□□ -0.3
CNOT3-209ENST00000617930 FER1L6-AS1Q8NA97 138 aa13.19□□□□□ -0.3
CNOT3-209ENST00000617930 OR8A1Q8NGG7 326 aa13.19□□□□□ -0.3
CNOT3-209ENST00000617930 PPP1R14DQ9NXH3 145 aa13.19□□□□□ -0.3
CNOT3-209ENST00000617930 U3KQK5 164 aa13.19□□□□□ -0.3
CNOT3-209ENST00000617930 ORM1P02763 201 aa13.18□□□□□ -0.3
CNOT3-209ENST00000617930 ELANEP08246 267 aa13.18□□□□□ -0.3
CNOT3-209ENST00000617930 TWIST1Q15672 202 aa13.18□□□□□ -0.3
CNOT3-209ENST00000617930 LINC01559Q495D7 138 aa13.18□□□□□ -0.3
CNOT3-209ENST00000617930 FAM106AQ4KMX7 169 aa13.18□□□□□ -0.3
CNOT3-209ENST00000617930 MRPL51Q4U2R6 128 aaKnown RBP13.18□□□□□ -0.3
CNOT3-209ENST00000617930 NUDT3O95989 172 aa13.18□□□□□ -0.3
CNOT3-209ENST00000617930 SRSF2Q01130 221 aaKnown RBP13.18□□□□□ -0.3
CNOT3-209ENST00000617930 TCTEX1D4Q5JR98 221 aa13.18□□□□□ -0.3
CNOT3-209ENST00000617930 MSRB1Q9NZV6 116 aa13.18□□□□□ -0.3
CNOT3-209ENST00000617930 NCR2O95944 276 aa13.17□□□□□ -0.3
CNOT3-209ENST00000617930 LGALS1P09382 135 aaKnown RBP13.17□□□□□ -0.3
CNOT3-209ENST00000617930 C12orf54Q6X4T0 127 aa13.17□□□□□ -0.3
CNOT3-209ENST00000617930 DCANP1Q8TF63 244 aa13.17□□□□□ -0.3
CNOT3-209ENST00000617930 INAFM1C9JVW0 142 aa13.17□□□□□ -0.3
CNOT3-209ENST00000617930 CCL25O15444 150 aa13.17□□□□□ -0.3
CNOT3-209ENST00000617930 UBE2V1Q13404 147 aa13.17□□□□□ -0.3
CNOT3-209ENST00000617930 KIR3DS1Q14943 382 aa13.17□□□□□ -0.3
CNOT3-209ENST00000617930 UBE2E2Q96LR5 201 aa13.17□□□□□ -0.3
CNOT3-209ENST00000617930 CKS2P33552 79 aa13.16□□□□□ -0.3
CNOT3-209ENST00000617930 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
CNOT3-209ENST00000617930 HIST1H1AQ02539 215 aaPredicted RBP13.16□□□□□ -0.3
CNOT3-209ENST00000617930 BVES-AS1Q5T3Y7 98 aa13.16□□□□□ -0.3
CNOT3-209ENST00000617930 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
CNOT3-209ENST00000617930 A0A096LNJ9 63 aa13.15□□□□□ -0.3
CNOT3-209ENST00000617930 FAM19A4Q96LR4 140 aa13.15□□□□□ -0.3
CNOT3-209ENST00000617930 SMKR1H3BMG3 65 aa13.15□□□□□ -0.3
CNOT3-209ENST00000617930 HBDP02042 147 aa13.15□□□□□ -0.3
CNOT3-209ENST00000617930 COX8AP10176 69 aa13.15□□□□□ -0.3
CNOT3-209ENST00000617930 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms