RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 DEFB131AP59861 70 aa2.58□□□□□ -2
LIG4-205ENST00000614526 KLF5Q13887 457 aaPredicted RBP2.58□□□□□ -2
LIG4-205ENST00000614526 ANXA2RQ3ZCQ2 193 aa2.58□□□□□ -2
LIG4-205ENST00000614526 COA6Q5JTJ3 125 aaKnown RBP2.58□□□□□ -2
LIG4-205ENST00000614526 C9orf47Q6ZRZ4 202 aa2.58□□□□□ -2
LIG4-205ENST00000614526 Q6ZWC4 215 aa2.58□□□□□ -2
LIG4-205ENST00000614526 NIT1Q86X76 327 aa2.58□□□□□ -2
LIG4-205ENST00000614526 ATOH7Q8N100 152 aa2.58□□□□□ -2
LIG4-205ENST00000614526 ZFAND2AQ8N6M9 145 aa2.58□□□□□ -2
LIG4-205ENST00000614526 DYNLRB2Q8TF09 96 aa2.58□□□□□ -2
LIG4-205ENST00000614526 RAX2Q96IS3 184 aa2.58□□□□□ -2
LIG4-205ENST00000614526 ATP6V0BQ99437 205 aa2.58□□□□□ -2
LIG4-205ENST00000614526 GFRA4Q9GZZ7 299 aa2.58□□□□□ -2
LIG4-205ENST00000614526 VWFP04275 2813 aa2.58□□□□□ -2
LIG4-205ENST00000614526 TENM1Q9UKZ4 2725 aa2.57□□□□□ -2
LIG4-205ENST00000614526 OVOL1O14753 267 aa2.57□□□□□ -2
LIG4-205ENST00000614526 SNRPD3P62318 126 aaKnown RBP2.57□□□□□ -2
LIG4-205ENST00000614526 TDRG1Q3Y452 100 aa2.57□□□□□ -2
LIG4-205ENST00000614526 SPANXN1Q5VSR9 72 aa2.57□□□□□ -2
LIG4-205ENST00000614526 ATP5L2Q7Z4Y8 100 aa2.57□□□□□ -2
LIG4-205ENST00000614526 OR9G4Q8NGQ1 327 aa2.57□□□□□ -2
LIG4-205ENST00000614526 RBAKDNA6NC62 111 aa2.57□□□□□ -2
LIG4-205ENST00000614526 CCL24O00175 119 aa2.57□□□□□ -2
LIG4-205ENST00000614526 PAFAH1B2P68402 229 aa2.57□□□□□ -2
LIG4-205ENST00000614526 Q0VG73 95 aa2.57□□□□□ -2
LIG4-205ENST00000614526 CD300EQ496F6 205 aaPredicted RBP2.57□□□□□ -2
LIG4-205ENST00000614526 COX19Q49B96 90 aa2.57□□□□□ -2
LIG4-205ENST00000614526 LINC00173Q6ZV60 143 aa2.57□□□□□ -2
LIG4-205ENST00000614526 Q8N2B8 174 aa2.57□□□□□ -2
LIG4-205ENST00000614526 MYOZ3Q8TDC0 251 aa2.57□□□□□ -2
LIG4-205ENST00000614526 LINC00477Q96M19 166 aa2.57□□□□□ -2
LIG4-205ENST00000614526 GSN-AS1Q9NRJ2 163 aa2.57□□□□□ -2
LIG4-205ENST00000614526 NACAE9PAV3 2078 aa2.57□□□□□ -2
LIG4-205ENST00000614526 TMEM89A2RUT3 159 aa2.57□□□□□ -2
LIG4-205ENST00000614526 FAM231BA6NCW3 169 aa2.57□□□□□ -2
LIG4-205ENST00000614526 K7EQG2 157 aa2.57□□□□□ -2
LIG4-205ENST00000614526 CKS2P33552 79 aa2.57□□□□□ -2
LIG4-205ENST00000614526 IFI27P40305 119 aaPredicted RBP2.57□□□□□ -2
LIG4-205ENST00000614526 MRPL51Q4U2R6 128 aaKnown RBP2.57□□□□□ -2
LIG4-205ENST00000614526 EBLN2Q6P2I7 272 aa2.57□□□□□ -2
LIG4-205ENST00000614526 PRSS3P2Q8NHM4 247 aa2.57□□□□□ -2
LIG4-205ENST00000614526 C4orf3Q8WVX3 66 aa2.57□□□□□ -2
LIG4-205ENST00000614526 URB1-AS1Q96HZ7 61 aa2.57□□□□□ -2
LIG4-205ENST00000614526 PMCHL2Q9BQD1 86 aa2.57□□□□□ -2
LIG4-205ENST00000614526 JPT2Q9H910 190 aa2.57□□□□□ -2
LIG4-205ENST00000614526 NBEAL2Q6ZNJ1 2754 aa2.56□□□□□ -2
LIG4-205ENST00000614526 IGHV3OR16-12A0A075B7B8 117 aa2.56□□□□□ -2
LIG4-205ENST00000614526 LINC00587B1AMM8 73 aa2.56□□□□□ -2
LIG4-205ENST00000614526 ZNF324O75467 553 aaPredicted RBP2.56□□□□□ -2
LIG4-205ENST00000614526 CD7P09564 240 aa2.56□□□□□ -2
LIG4-205ENST00000614526 IGLC6P0CF74 106 aa2.56□□□□□ -2
LIG4-205ENST00000614526 TCTAP57738 103 aa2.56□□□□□ -2
LIG4-205ENST00000614526 JOSD1Q15040 202 aaPredicted RBP2.56□□□□□ -2
LIG4-205ENST00000614526 LINC01559Q495D7 138 aa2.56□□□□□ -2
LIG4-205ENST00000614526 OR10J3Q5JRS4 329 aa2.56□□□□□ -2
LIG4-205ENST00000614526 RASL11AQ6T310 242 aa2.56□□□□□ -2
LIG4-205ENST00000614526 TMEM86BQ8N661 226 aa2.56□□□□□ -2
LIG4-205ENST00000614526 TEX29Q8N6K0 151 aa2.56□□□□□ -2
LIG4-205ENST00000614526 C14orf178Q8N769 122 aaPredicted RBP2.56□□□□□ -2
LIG4-205ENST00000614526 MRPL53Q96EL3 112 aaKnown RBP2.56□□□□□ -2
LIG4-205ENST00000614526 KCNS1Q96KK3 526 aa2.56□□□□□ -2
LIG4-205ENST00000614526 PRELID3AQ96N28 172 aa2.56□□□□□ -2
LIG4-205ENST00000614526 TRAV21A0A0B4J279 112 aa2.56□□□□□ -2
LIG4-205ENST00000614526 A0A0J9YX75 114 aa2.56□□□□□ -2
LIG4-205ENST00000614526 FBLL1A6NHQ2 334 aaKnown RBP2.56□□□□□ -2
LIG4-205ENST00000614526 SAP30O75446 220 aa2.56□□□□□ -2
LIG4-205ENST00000614526 NPYP01303 97 aa2.56□□□□□ -2
LIG4-205ENST00000614526 RNASE1P07998 156 aaKnown RBP2.56□□□□□ -2
LIG4-205ENST00000614526 HILS1P60008 231 aa2.56□□□□□ -2
LIG4-205ENST00000614526 DMRTA1Q5VZB9 504 aa2.56□□□□□ -2
LIG4-205ENST00000614526 FAM104BQ5XKR9 115 aa2.56□□□□□ -2
LIG4-205ENST00000614526 FAM159AQ6UWV7 190 aa2.56□□□□□ -2
LIG4-205ENST00000614526 REC114Q7Z4M0 266 aa2.56□□□□□ -2
LIG4-205ENST00000614526 RNF152Q8N8N0 203 aa2.56□□□□□ -2
LIG4-205ENST00000614526 WFDC10AQ9H1F0 79 aa2.56□□□□□ -2
LIG4-205ENST00000614526 PEMTQ9UBM1 199 aa2.56□□□□□ -2
LIG4-205ENST00000614526 PHLDA3Q9Y5J5 127 aa2.56□□□□□ -2
LIG4-205ENST00000614526 BAHCC1Q9P281 2608 aa2.56□□□□□ -2
LIG4-205ENST00000614526 A0A087WWL8 130 aa2.56□□□□□ -2
LIG4-205ENST00000614526 LGALS9O00182 355 aa2.56□□□□□ -2
LIG4-205ENST00000614526 MGPP08493 103 aa2.56□□□□□ -2
LIG4-205ENST00000614526 LINC00614P0C842 121 aa2.56□□□□□ -2
LIG4-205ENST00000614526 C3orf79P0CE67 100 aa2.56□□□□□ -2
LIG4-205ENST00000614526 RPS20P60866 119 aaKnown RBP2.56□□□□□ -2
LIG4-205ENST00000614526 DEFB114Q30KQ6 69 aa2.56□□□□□ -2
LIG4-205ENST00000614526 MAJINQ3KP22 176 aa2.56□□□□□ -2
LIG4-205ENST00000614526 FAM74A4Q5TZK3 123 aa2.56□□□□□ -2
LIG4-205ENST00000614526 ARL6IP6Q8N6S5 226 aa2.56□□□□□ -2
LIG4-205ENST00000614526 MDFICQ9P1T7 246 aa2.56□□□□□ -2
LIG4-205ENST00000614526 PAM16Q9Y3D7 125 aa2.56□□□□□ -2
LIG4-205ENST00000614526 RAB4AP20338 218 aa2.55□□□□□ -2
LIG4-205ENST00000614526 CTRLP40313 264 aa2.55□□□□□ -2
LIG4-205ENST00000614526 ASIPP42127 132 aa2.55□□□□□ -2
LIG4-205ENST00000614526 KRTAP10-3P60369 221 aa2.55□□□□□ -2
LIG4-205ENST00000614526 S100A12P80511 92 aa2.55□□□□□ -2
LIG4-205ENST00000614526 Q6AWC8 147 aa2.55□□□□□ -2
LIG4-205ENST00000614526 FA2HQ7L5A8 372 aa2.55□□□□□ -2
LIG4-205ENST00000614526 COX8CQ7Z4L0 72 aa2.55□□□□□ -2
LIG4-205ENST00000614526 ORMDL3Q8N138 153 aa2.55□□□□□ -2
LIG4-205ENST00000614526 ZNF664Q8N3J9 261 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms