RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PPT1P50897 306 aa9.1□□□□□ -0.95
CLPTM1-208ENST00000588274 RANP62826 216 aaKnown RBP9.1□□□□□ -0.95
CLPTM1-208ENST00000588274 LAGE3Q14657 143 aa9.1□□□□□ -0.95
CLPTM1-208ENST00000588274 FAM159AQ6UWV7 190 aa9.1□□□□□ -0.95
CLPTM1-208ENST00000588274 SCXQ7RTU7 201 aa9.1□□□□□ -0.95
CLPTM1-208ENST00000588274 NHLRC2Q8NBF2 726 aa9.1□□□□□ -0.95
CLPTM1-208ENST00000588274 OR5C1Q8NGR4 320 aa9.1□□□□□ -0.95
CLPTM1-208ENST00000588274 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
CLPTM1-208ENST00000588274 WDR61Q9GZS3 305 aaKnown RBP9.1□□□□□ -0.95
CLPTM1-208ENST00000588274 IGHV3-30P01768 117 aa9.09□□□□□ -0.95
CLPTM1-208ENST00000588274 IGHV3-33P01772 117 aa9.09□□□□□ -0.95
CLPTM1-208ENST00000588274 LINC00694P0DN24 101 aa9.09□□□□□ -0.95
CLPTM1-208ENST00000588274 IGHV3-30-3P0DP02 117 aa9.09□□□□□ -0.95
CLPTM1-208ENST00000588274 IGHV3-30-5P0DP03 117 aa9.09□□□□□ -0.95
CLPTM1-208ENST00000588274 NAGKQ9UJ70 344 aa9.09□□□□□ -0.95
CLPTM1-208ENST00000588274 CCDC160A6NGH7 325 aa9.08□□□□□ -0.96
CLPTM1-208ENST00000588274 H0YIZ8 118 aa9.08□□□□□ -0.96
CLPTM1-208ENST00000588274 UBE2L3P68036 154 aaKnown RBP9.08□□□□□ -0.96
CLPTM1-208ENST00000588274 LELP1Q5T871 98 aa9.08□□□□□ -0.96
CLPTM1-208ENST00000588274 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
CLPTM1-208ENST00000588274 C11orf21Q9P2W6 132 aa9.08□□□□□ -0.96
CLPTM1-208ENST00000588274 F6UZH7 168 aa9.07□□□□□ -0.96
CLPTM1-208ENST00000588274 OR7C2O60412 319 aa9.07□□□□□ -0.96
CLPTM1-208ENST00000588274 EIF3GO75821 320 aaKnown RBP eCLIP9.07□□□□□ -0.96
CLPTM1-208ENST00000588274 LINC01620Q4KN68 170 aa9.07□□□□□ -0.96
CLPTM1-208ENST00000588274 OR5AC2Q9NZP5 309 aa9.07□□□□□ -0.96
CLPTM1-208ENST00000588274 TRAV8-1A0A0A6YYK1 113 aa9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 TRAV8-6A0A0B4J262 113 aa9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 TRBV6-4A0A1B0GX49 114 aa9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 FBLL1A6NHQ2 334 aaKnown RBP9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 LECT2O14960 151 aa9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 RS1O15537 224 aa9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 PFN1P07737 140 aaKnown RBP9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 CSN1S1P47710 185 aa9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 OR10J3Q5JRS4 329 aa9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
CLPTM1-208ENST00000588274 TRAV21A0A0B4J279 112 aa9.05□□□□□ -0.96
CLPTM1-208ENST00000588274 RHOHQ15669 191 aa9.05□□□□□ -0.96
CLPTM1-208ENST00000588274 C9orf85Q96MD7 179 aa9.05□□□□□ -0.96
CLPTM1-208ENST00000588274 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
CLPTM1-208ENST00000588274 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.04□□□□□ -0.96
CLPTM1-208ENST00000588274 ZNF80P51504 273 aaPredicted RBP9.04□□□□□ -0.96
CLPTM1-208ENST00000588274 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
CLPTM1-208ENST00000588274 GTSF1LQ9H1H1 148 aa9.04□□□□□ -0.96
CLPTM1-208ENST00000588274 OTORQ9NRC9 128 aa9.04□□□□□ -0.96
CLPTM1-208ENST00000588274 KCNIP2Q9NS61 270 aa9.04□□□□□ -0.96
CLPTM1-208ENST00000588274 Q9UF83 564 aa9.04□□□□□ -0.96
CLPTM1-208ENST00000588274 IGHV3-73A0A0B4J1V6 119 aa9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 H2AFB2P0C5Z0 115 aa9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 KHDC3LQ587J8 217 aa9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 GOLT1AQ6ZVE7 132 aa9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 DAZ4Q86SG3 579 aaKnown RBP9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 HYLS1Q96M11 299 aa9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 SDF2L1Q9HCN8 221 aa9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 DAZ3Q9NR90 486 aaKnown RBP9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 BOLA1Q9Y3E2 137 aa9.03□□□□□ -0.96
CLPTM1-208ENST00000588274 PGPEP1LA6NFU8 196 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 SIX6O95475 246 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 OXTP01178 125 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 RNASE3P12724 160 aaKnown RBP9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 GNG5P63218 68 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 ZNF506Q5JVG8 444 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 TMEM75Q8N9X5 138 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 ATP6V0E2Q8NHE4 81 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 CIRBP-AS1Q8TBR5 109 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 ASB13Q8WXK3 278 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 PTH2Q96A98 100 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 PRADC1Q9BSG0 188 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 CHAC1Q9BUX1 264 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 TM2D2Q9BX73 214 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 TREM1Q9NP99 234 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 RPH3ALQ9UNE2 315 aa9.02□□□□□ -0.97
CLPTM1-208ENST00000588274 PGPA6NDG6 321 aa9.01□□□□□ -0.97
CLPTM1-208ENST00000588274 CIDEAO60543 219 aa9.01□□□□□ -0.97
CLPTM1-208ENST00000588274 FFAR4Q5NUL3 377 aa9.01□□□□□ -0.97
CLPTM1-208ENST00000588274 UFSP1Q6NVU6 142 aa9.01□□□□□ -0.97
CLPTM1-208ENST00000588274 ARL6IP6Q8N6S5 226 aa9.01□□□□□ -0.97
CLPTM1-208ENST00000588274 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
CLPTM1-208ENST00000588274 KCNS1Q96KK3 526 aa9.01□□□□□ -0.97
CLPTM1-208ENST00000588274 ATP5SQ99766 215 aa9.01□□□□□ -0.97
CLPTM1-208ENST00000588274 C17orf112F2Z3M2 114 aa9□□□□□ -0.97
CLPTM1-208ENST00000588274 IGLV2-11P01706 119 aa9□□□□□ -0.97
CLPTM1-208ENST00000588274 MGST1P10620 155 aaKnown RBP9□□□□□ -0.97
CLPTM1-208ENST00000588274 HNRNPA3P51991 378 aaKnown RBP9□□□□□ -0.97
CLPTM1-208ENST00000588274 LRRC37A5PQ49AS3 106 aa9□□□□□ -0.97
CLPTM1-208ENST00000588274 NMES1Q9C002 83 aa9□□□□□ -0.97
CLPTM1-208ENST00000588274 TNXBP22105 4242 aa9□□□□□ -0.97
CLPTM1-208ENST00000588274 TRAV8-3A0A0A6YYJ7 113 aa8.99□□□□□ -0.97
CLPTM1-208ENST00000588274 RNF222A6NCQ9 220 aa8.99□□□□□ -0.97
CLPTM1-208ENST00000588274 H2BFSP57053 126 aa8.99□□□□□ -0.97
CLPTM1-208ENST00000588274 SYT8Q8NBV8 401 aa8.99□□□□□ -0.97
CLPTM1-208ENST00000588274 SGK494Q96LW2 274 aa8.99□□□□□ -0.97
CLPTM1-208ENST00000588274 LINC00479Q96M42 142 aa8.99□□□□□ -0.97
CLPTM1-208ENST00000588274 PARLQ9H300 379 aa8.99□□□□□ -0.97
CLPTM1-208ENST00000588274 MBD2Q9UBB5 411 aa8.99□□□□□ -0.97
CLPTM1-208ENST00000588274 LRP2P98164 4655 aa8.98□□□□□ -0.97
CLPTM1-208ENST00000588274 TAS2R45P59539 299 aa8.98□□□□□ -0.97
CLPTM1-208ENST00000588274 CMTM2Q8TAZ6 248 aa8.98□□□□□ -0.97
CLPTM1-208ENST00000588274 PLA2G2DQ9UNK4 145 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms