RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 RPL23P62829 140 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-212ENST00000580061 KCNS1Q96KK3 526 aa11.47□□□□□ -0.57
CSNK1D-212ENST00000580061 SDF2L1Q9HCN8 221 aa11.47□□□□□ -0.57
CSNK1D-212ENST00000580061 TENM3Q9P273 2699 aa11.46□□□□□ -0.57
CSNK1D-212ENST00000580061 CBY3A6NI87 242 aa11.46□□□□□ -0.57
CSNK1D-212ENST00000580061 F8W036 122 aa11.46□□□□□ -0.57
CSNK1D-212ENST00000580061 ORM1P02763 201 aa11.46□□□□□ -0.57
CSNK1D-212ENST00000580061 NDUFA5Q16718 116 aa11.46□□□□□ -0.57
CSNK1D-212ENST00000580061 SLC7A5P1Q8MH63 180 aa11.46□□□□□ -0.57
CSNK1D-212ENST00000580061 Q8NAQ8 132 aa11.46□□□□□ -0.57
CSNK1D-212ENST00000580061 SEC11CQ9BY50 192 aa11.46□□□□□ -0.57
CSNK1D-212ENST00000580061 TP53TG3Q9ULZ0 132 aa11.46□□□□□ -0.57
CSNK1D-212ENST00000580061 IGHV4-28A0A0C4DH34 117 aa11.45□□□□□ -0.58
CSNK1D-212ENST00000580061 KRBOX1C9JBD0 128 aa11.45□□□□□ -0.58
CSNK1D-212ENST00000580061 M0R036 132 aa11.45□□□□□ -0.58
CSNK1D-212ENST00000580061 TYMSP04818 313 aa11.45□□□□□ -0.58
CSNK1D-212ENST00000580061 ADIRFQ15847 76 aa11.45□□□□□ -0.58
CSNK1D-212ENST00000580061 LINC01559Q495D7 138 aa11.45□□□□□ -0.58
CSNK1D-212ENST00000580061 RNASE8Q8TDE3 154 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-212ENST00000580061 TMEM263Q8WUH6 116 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-212ENST00000580061 DAZAP1Q96EP5 407 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-212ENST00000580061 B4DEV8 164 aa11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 GNRH2O43555 120 aa11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 RPL19P84098 196 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 ZNF493Q6ZR52 646 aa11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 FAM231DQ6ZW35 169 aa11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 ZNF575Q86XF7 245 aa11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 NUDT10Q8NFP7 164 aa11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 ISOC2Q96AB3 205 aa11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 NUDT11Q96G61 164 aa11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 C16orf74Q96GX8 76 aa11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 RNASE7Q9H1E1 156 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-212ENST00000580061 TRGV11A0A075B6L2 103 aa11.43□□□□□ -0.58
CSNK1D-212ENST00000580061 PLAC8L1A1L4L8 177 aa11.43□□□□□ -0.58
CSNK1D-212ENST00000580061 P01737 135 aa11.43□□□□□ -0.58
CSNK1D-212ENST00000580061 PNRC1Q12796 327 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-212ENST00000580061 C10orf91Q5T1B1 145 aa11.43□□□□□ -0.58
CSNK1D-212ENST00000580061 IBA57Q5T440 356 aaKnown RBP11.43□□□□□ -0.58
CSNK1D-212ENST00000580061 C11orf72Q8NBR9 251 aa11.43□□□□□ -0.58
CSNK1D-212ENST00000580061 TMSB15BA0A087X1C1 80 aa11.42□□□□□ -0.58
CSNK1D-212ENST00000580061 IGHV3-16A0A0C4DH30 117 aa11.42□□□□□ -0.58
CSNK1D-212ENST00000580061 TMEM189A5PLL7 270 aa11.42□□□□□ -0.58
CSNK1D-212ENST00000580061 DEFB4AO15263 64 aa11.42□□□□□ -0.58
CSNK1D-212ENST00000580061 ERVFC1-1P60608 527 aa11.42□□□□□ -0.58
CSNK1D-212ENST00000580061 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
CSNK1D-212ENST00000580061 ZNF415Q09FC8 603 aa11.41□□□□□ -0.58
CSNK1D-212ENST00000580061 DNLZQ5SXM8 178 aa11.41□□□□□ -0.58
CSNK1D-212ENST00000580061 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
CSNK1D-212ENST00000580061 SFRP2Q96HF1 295 aa11.41□□□□□ -0.58
CSNK1D-212ENST00000580061 C11orf68Q9H3H3 251 aaKnown RBP11.41□□□□□ -0.58
CSNK1D-212ENST00000580061 GSN-AS1Q9NRJ2 163 aa11.41□□□□□ -0.58
CSNK1D-212ENST00000580061 OSTCQ9NRP0 149 aa11.41□□□□□ -0.58
CSNK1D-212ENST00000580061 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
CSNK1D-212ENST00000580061 A0A0J9YWU9 116 aa11.4□□□□□ -0.58
CSNK1D-212ENST00000580061 GRIFINA4D1Z8 144 aa11.4□□□□□ -0.58
CSNK1D-212ENST00000580061 GATCO43716 136 aaKnown RBP11.4□□□□□ -0.58
CSNK1D-212ENST00000580061 CXCL1P09341 107 aa11.4□□□□□ -0.58
CSNK1D-212ENST00000580061 TCL1AP56279 114 aa11.4□□□□□ -0.58
CSNK1D-212ENST00000580061 IL17DQ8TAD2 202 aa11.4□□□□□ -0.58
CSNK1D-212ENST00000580061 RPP21Q9H633 154 aaKnown RBP11.4□□□□□ -0.58
CSNK1D-212ENST00000580061 U3KQK5 164 aa11.4□□□□□ -0.58
CSNK1D-212ENST00000580061 SNURFLB1AK76 121 aa11.39□□□□□ -0.59
CSNK1D-212ENST00000580061 RNASE3P12724 160 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-212ENST00000580061 ASIPP42127 132 aa11.39□□□□□ -0.59
CSNK1D-212ENST00000580061 EMP1P54849 157 aa11.39□□□□□ -0.59
CSNK1D-212ENST00000580061 RPS20P60866 119 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-212ENST00000580061 GZMBP10144 247 aa11.38□□□□□ -0.59
CSNK1D-212ENST00000580061 S100A4P26447 101 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-212ENST00000580061 DAZ2Q13117 558 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-212ENST00000580061 C15orf54Q8N8G6 183 aa11.38□□□□□ -0.59
CSNK1D-212ENST00000580061 OR10G8Q8NGN5 311 aa11.38□□□□□ -0.59
CSNK1D-212ENST00000580061 C9orf85Q96MD7 179 aa11.38□□□□□ -0.59
CSNK1D-212ENST00000580061 TIMM8BQ9Y5J9 83 aaPredicted RBP11.38□□□□□ -0.59
CSNK1D-212ENST00000580061 V9GYV3 84 aa11.38□□□□□ -0.59
CSNK1D-212ENST00000580061 MUC4Q99102 2169 aa11.38□□□□□ -0.59
CSNK1D-212ENST00000580061 XKRY2A2RUG3 117 aa11.37□□□□□ -0.59
CSNK1D-212ENST00000580061 H3BVH4 76 aa11.37□□□□□ -0.59
CSNK1D-212ENST00000580061 ARMS2P0C7Q2 107 aa11.37□□□□□ -0.59
CSNK1D-212ENST00000580061 CT83Q5H943 113 aa11.37□□□□□ -0.59
CSNK1D-212ENST00000580061 NOP10Q9NPE3 64 aaKnown RBP11.37□□□□□ -0.59
CSNK1D-212ENST00000580061 IL36BQ9NZH7 164 aa11.37□□□□□ -0.59
CSNK1D-212ENST00000580061 DKK2Q9UBU2 259 aa11.37□□□□□ -0.59
CSNK1D-212ENST00000580061 SPINK4O60575 86 aa11.36□□□□□ -0.59
CSNK1D-212ENST00000580061 MED14OSP0DP75 135 aa11.36□□□□□ -0.59
CSNK1D-212ENST00000580061 FAM222AQ5U5X8 452 aa11.36□□□□□ -0.59
CSNK1D-212ENST00000580061 SPXQ9BT56 116 aa11.36□□□□□ -0.59
CSNK1D-212ENST00000580061 EDA2RQ9HAV5 297 aa11.36□□□□□ -0.59
CSNK1D-212ENST00000580061 CELA1Q9UNI1 258 aa11.36□□□□□ -0.59
CSNK1D-212ENST00000580061 LYRM9A8MSI8 78 aa11.35□□□□□ -0.59
CSNK1D-212ENST00000580061 A8MWL6 223 aa11.35□□□□□ -0.59
CSNK1D-212ENST00000580061 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
CSNK1D-212ENST00000580061 SPART-AS1P0CW21 52 aa11.35□□□□□ -0.59
CSNK1D-212ENST00000580061 RNF212Q495C1 297 aa11.35□□□□□ -0.59
CSNK1D-212ENST00000580061 SSBP4Q9BWG4 385 aaPredicted RBP11.35□□□□□ -0.59
CSNK1D-212ENST00000580061 SCRT2Q9NQ03 307 aa11.35□□□□□ -0.59
CSNK1D-212ENST00000580061 M0R2P5 195 aa11.34□□□□□ -0.59
CSNK1D-212ENST00000580061 PPP1R2P9O14990 202 aa11.34□□□□□ -0.59
CSNK1D-212ENST00000580061 SNAI2O43623 268 aa11.34□□□□□ -0.59
CSNK1D-212ENST00000580061 APOC3P02656 99 aa11.34□□□□□ -0.59
CSNK1D-212ENST00000580061 OR5AL1P0C617 328 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms