RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 SAA2P0DJI9 122 aaPredicted RBP7.19□□□□□ -1.26
CDH8-203ENST00000577390 ZNF138P52744 262 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 NMSQ5H8A3 153 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 FOXI2Q6ZQN5 318 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 RPRMLQ8N4K4 120 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 WIPF2Q8TF74 440 aaPredicted RBP7.18□□□□□ -1.26
CDH8-203ENST00000577390 NOP10Q9NPE3 64 aaKnown RBP7.18□□□□□ -1.26
CDH8-203ENST00000577390 MYO18BQ8IUG5 2567 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 A0A096LNI7 61 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 PAPPA2Q9BXP8 1791 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 NUPR1O60356 82 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 C7orf33Q8WU49 177 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 E9PLN8 166 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 EXOC3-AS1Q8N2X6 119 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 RHPN1-AS1Q9BWJ2 59 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 QRFPP83859 136 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 FAM223BA6NKX1 122 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 FAM223AQ8IWN6 122 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 C1QTNF5Q9BXJ0 243 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 SMIM27A0A1W2PRY6 76 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 BAALC-AS2P0C853 105 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 SLC25A45Q8N413 288 aa7.18□□□□□ -1.26
CDH8-203ENST00000577390 SHISA2Q6UWI4 295 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 NUP35Q8NFH5 326 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 ANKHD1Q8IWZ3 2542 aaKnown RBP7.17□□□□□ -1.26
CDH8-203ENST00000577390 IGKV2-24A0A0C4DH68 120 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 BPESC1Q9GZL8 116 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 TRAV13-2A0A0B4J235 113 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 NREPQ16612 68 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 FOXI1Q12951 378 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 HIGD2BQ4VC39 106 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 PIFOQ8TCI5 191 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 ZNF462Q96JM2 2506 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 ADAMTS20P59510 1910 aa7.17□□□□□ -1.26
CDH8-203ENST00000577390 DUX4L9Q6RFH8 374 aaPredicted RBP7.17□□□□□ -1.26
CDH8-203ENST00000577390 ZNF672Q499Z4 452 aaPredicted RBP7.17□□□□□ -1.26
CDH8-203ENST00000577390 A0A0J9YWU9 116 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 MT-ATP8P03928 68 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 PYYP10082 97 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 FOXF2Q12947 444 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 RUSC1-AS1Q66K80 236 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 ORMDL1Q9P0S3 153 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 IGKV1D-16P01601 117 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 IGKV1-16P04430 117 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 COX6A1P12074 109 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 CEND1Q8N111 149 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 HLA-DRB4P13762 266 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 FGFBP3Q8TAT2 258 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 ZNF501Q96CX3 271 aaPredicted RBP7.16□□□□□ -1.26
CDH8-203ENST00000577390 CSDC2Q9Y534 153 aaKnown RBP7.16□□□□□ -1.26
CDH8-203ENST00000577390 HLA-DRB4X5D2U9 266 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 CR1LQ2VPA4 569 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 C9orf66Q5T8R8 295 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 Q8TAT8 98 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 PIEZO1Q92508 2521 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 I3L3M4 83 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 OVOL3O00110 214 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 IGHV4-30-4P0DP06 118 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 IGHV4-31P0DP07 118 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 ZFP36L1Q07352 338 aaKnown RBP7.16□□□□□ -1.26
CDH8-203ENST00000577390 ESM1Q9NQ30 184 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 NDUFA4O00483 81 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 SAA4P35542 130 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 LINC00114Q6XXX2 140 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 COX14Q96I36 57 aa7.16□□□□□ -1.26
CDH8-203ENST00000577390 CSRP1P21291 193 aaKnown RBP7.15□□□□□ -1.26
CDH8-203ENST00000577390 Q0VFX4 171 aa7.15□□□□□ -1.26
CDH8-203ENST00000577390 A0A087WZ39 114 aa7.15□□□□□ -1.26
CDH8-203ENST00000577390 M0QXV9 152 aa7.15□□□□□ -1.26
CDH8-203ENST00000577390 RNASE13Q5GAN3 156 aaKnown RBP7.15□□□□□ -1.26
CDH8-203ENST00000577390 PLA2G2EQ9NZK7 142 aa7.15□□□□□ -1.26
CDH8-203ENST00000577390 LHFPL6Q9Y693 200 aa7.15□□□□□ -1.26
CDH8-203ENST00000577390 ICOSQ9Y6W8 199 aa7.15□□□□□ -1.26
CDH8-203ENST00000577390 MSMBP08118 114 aa7.15□□□□□ -1.26
CDH8-203ENST00000577390 SH2D6Q7Z4S9 175 aa7.15□□□□□ -1.26
CDH8-203ENST00000577390 V9GYV3 84 aa7.15□□□□□ -1.27
CDH8-203ENST00000577390 A0A1W2PR77 199 aa7.15□□□□□ -1.27
CDH8-203ENST00000577390 LTAP01374 205 aa7.15□□□□□ -1.27
CDH8-203ENST00000577390 SERP2Q8N6R1 65 aa7.15□□□□□ -1.27
CDH8-203ENST00000577390 GFRA4Q9GZZ7 299 aa7.15□□□□□ -1.27
CDH8-203ENST00000577390 LINC01545Q5VT33 79 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 COX7B2Q8TF08 81 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 IGHV1-2P23083 117 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 PRR20EP86478 221 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 PRR20CP86479 221 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 PRR20DP86480 221 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 PRR20BP86481 221 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 PRR20AP86496 221 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 MRPL55Q7Z7F7 128 aaKnown RBP7.14□□□□□ -1.27
CDH8-203ENST00000577390 SAP25Q8TEE9 199 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 V9GYY9 64 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 MRPL23Q16540 153 aaKnown RBP7.14□□□□□ -1.27
CDH8-203ENST00000577390 IGFL4Q6B9Z1 124 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 VN1R4Q7Z5H5 301 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 C8orf49Q96NF6 230 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 C17orf98A8MV24 154 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 PRR31Q5SQ13 230 aa7.14□□□□□ -1.27
CDH8-203ENST00000577390 AMTNQ6UX39 209 aa7.13□□□□□ -1.27
CDH8-203ENST00000577390 TMEM14EPQ6UXP3 125 aa7.13□□□□□ -1.27
CDH8-203ENST00000577390 HIVEP2P31629 2446 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms