RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 SPXQ9BT56 116 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 KCNIP2Q9NS61 270 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 IGLV5-52A0A0A0MRZ9 124 aa10.42□□□□□ -0.74
NME3-211ENST00000568561 TRAV4A0A0B4J268 109 aa10.42□□□□□ -0.74
NME3-211ENST00000568561 PSCAO43653 123 aa10.42□□□□□ -0.74
NME3-211ENST00000568561 H2BFSP57053 126 aa10.42□□□□□ -0.74
NME3-211ENST00000568561 ASB13Q8WXK3 278 aa10.42□□□□□ -0.74
NME3-211ENST00000568561 Q9HAA7 133 aa10.42□□□□□ -0.74
NME3-211ENST00000568561 LRCOL1A6NCL2 159 aa10.41□□□□□ -0.74
NME3-211ENST00000568561 F6UZH7 168 aa10.41□□□□□ -0.74
NME3-211ENST00000568561 K7EP13 123 aa10.41□□□□□ -0.74
NME3-211ENST00000568561 PPT1P50897 306 aa10.41□□□□□ -0.74
NME3-211ENST00000568561 FFAR4Q5NUL3 377 aa10.41□□□□□ -0.74
NME3-211ENST00000568561 C10orf126Q8N4M7 172 aa10.41□□□□□ -0.74
NME3-211ENST00000568561 IGHV3-38A0A0C4DH36 116 aa10.4□□□□□ -0.74
NME3-211ENST00000568561 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
NME3-211ENST00000568561 TYMSP04818 313 aa10.4□□□□□ -0.74
NME3-211ENST00000568561 GIPP09681 153 aaPredicted RBP10.4□□□□□ -0.74
NME3-211ENST00000568561 Q6ZSN1 163 aa10.4□□□□□ -0.74
NME3-211ENST00000568561 NMES1Q9C002 83 aa10.4□□□□□ -0.74
NME3-211ENST00000568561 TRAV8-1A0A0A6YYK1 113 aa10.39□□□□□ -0.75
NME3-211ENST00000568561 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
NME3-211ENST00000568561 M0R2P5 195 aa10.39□□□□□ -0.75
NME3-211ENST00000568561 CYCSP99999 105 aaKnown RBP10.39□□□□□ -0.75
NME3-211ENST00000568561 TDRG1Q3Y452 100 aa10.39□□□□□ -0.75
NME3-211ENST00000568561 KHDC3LQ587J8 217 aa10.39□□□□□ -0.75
NME3-211ENST00000568561 GOLT1AQ6ZVE7 132 aa10.39□□□□□ -0.75
NME3-211ENST00000568561 ATP5SQ99766 215 aa10.39□□□□□ -0.75
NME3-211ENST00000568561 SMIM3Q9BZL3 60 aa10.39□□□□□ -0.75
NME3-211ENST00000568561 LENEPQ9Y5L5 61 aa10.39□□□□□ -0.75
NME3-211ENST00000568561 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 IGHV3-33P01772 117 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 GATA1P15976 413 aaPredicted RBP10.38□□□□□ -0.75
NME3-211ENST00000568561 GNG5P63218 68 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 LINC01556Q5JQF7 62 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 AKAP14Q86UN6 197 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 TVP23CQ96ET8 276 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 OTORQ9NRC9 128 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 FAM30AQ9NZY2 134 aa10.38□□□□□ -0.75
NME3-211ENST00000568561 IGHV3-73A0A0B4J1V6 119 aa10.37□□□□□ -0.75
NME3-211ENST00000568561 PGPA6NDG6 321 aa10.37□□□□□ -0.75
NME3-211ENST00000568561 OR10J3Q5JRS4 329 aa10.37□□□□□ -0.75
NME3-211ENST00000568561 TCTE3Q8IZS6 198 aa10.37□□□□□ -0.75
NME3-211ENST00000568561 Q8N814 137 aa10.37□□□□□ -0.75
NME3-211ENST00000568561 CMTM2Q8TAZ6 248 aa10.37□□□□□ -0.75
NME3-211ENST00000568561 TMED6Q8WW62 240 aa10.37□□□□□ -0.75
NME3-211ENST00000568561 SGK494Q96LW2 274 aa10.37□□□□□ -0.75
NME3-211ENST00000568561 TMEM70Q9BUB7 260 aa10.37□□□□□ -0.75
NME3-211ENST00000568561 TRAV21A0A0B4J279 112 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 FBLL1A6NHQ2 334 aaKnown RBP10.36□□□□□ -0.75
NME3-211ENST00000568561 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 PFDN1O60925 122 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 TIRAPP58753 221 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 TAS2R45P59539 299 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 DPPA3Q6W0C5 159 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 SLC25A29Q8N8R3 303 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 NTN5Q8WTR8 489 aaPredicted RBP10.36□□□□□ -0.75
NME3-211ENST00000568561 SDF2L1Q9HCN8 221 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 TREM1Q9NP99 234 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 MBD2Q9UBB5 411 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 HSPB11Q9Y547 144 aa10.36□□□□□ -0.75
NME3-211ENST00000568561 TRAV8-6A0A0B4J262 113 aa10.35□□□□□ -0.75
NME3-211ENST00000568561 G3V3Q6 166 aa10.35□□□□□ -0.75
NME3-211ENST00000568561 HMGB3O15347 200 aaKnown RBP10.35□□□□□ -0.75
NME3-211ENST00000568561 WFDC2Q14508 124 aa10.35□□□□□ -0.75
NME3-211ENST00000568561 SH2D6Q7Z4S9 175 aa10.35□□□□□ -0.75
NME3-211ENST00000568561 Q8N3U1 123 aa10.35□□□□□ -0.75
NME3-211ENST00000568561 PPP1R1CQ8WVI7 109 aa10.35□□□□□ -0.75
NME3-211ENST00000568561 MPC2O95563 127 aa10.34□□□□□ -0.75
NME3-211ENST00000568561 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
NME3-211ENST00000568561 Q5BKY6 102 aa10.34□□□□□ -0.75
NME3-211ENST00000568561 TMEM75Q8N9X5 138 aa10.34□□□□□ -0.75
NME3-211ENST00000568561 OR2T35Q8NGX2 323 aa10.34□□□□□ -0.75
NME3-211ENST00000568561 SCGB1C1Q8TD33 95 aa10.34□□□□□ -0.75
NME3-211ENST00000568561 C11orf21Q9P2W6 132 aa10.34□□□□□ -0.75
NME3-211ENST00000568561 J3QL48 77 aa10.33□□□□□ -0.76
NME3-211ENST00000568561 ZNF80P51504 273 aaPredicted RBP10.33□□□□□ -0.76
NME3-211ENST00000568561 RAB2AP61019 212 aa10.33□□□□□ -0.76
NME3-211ENST00000568561 FAM74A1Q5RGS3 127 aa10.33□□□□□ -0.76
NME3-211ENST00000568561 CFAP126Q5VTH2 177 aa10.33□□□□□ -0.76
NME3-211ENST00000568561 WFDC1Q9HC57 220 aa10.33□□□□□ -0.76
NME3-211ENST00000568561 LECT2O14960 151 aa10.32□□□□□ -0.76
NME3-211ENST00000568561 RS1O15537 224 aa10.32□□□□□ -0.76
NME3-211ENST00000568561 PFN1P07737 140 aaKnown RBP10.32□□□□□ -0.76
NME3-211ENST00000568561 RHOHQ15669 191 aa10.32□□□□□ -0.76
NME3-211ENST00000568561 KCNS1Q96KK3 526 aa10.32□□□□□ -0.76
NME3-211ENST00000568561 PRADC1Q9BSG0 188 aa10.32□□□□□ -0.76
NME3-211ENST00000568561 SMLR1H3BR10 107 aa10.31□□□□□ -0.76
NME3-211ENST00000568561 C1QBP02746 253 aa10.31□□□□□ -0.76
NME3-211ENST00000568561 PET100P0DJ07 73 aa10.31□□□□□ -0.76
NME3-211ENST00000568561 RPL12P30050 165 aaKnown RBP10.31□□□□□ -0.76
NME3-211ENST00000568561 LELP1Q5T871 98 aa10.31□□□□□ -0.76
NME3-211ENST00000568561 A0A1W2PPV4 95 aa10.3□□□□□ -0.76
NME3-211ENST00000568561 ZNF506Q5JVG8 444 aa10.3□□□□□ -0.76
NME3-211ENST00000568561 PQLC2Q6ZP29 291 aa10.3□□□□□ -0.76
NME3-211ENST00000568561 TRBV6-4A0A1B0GX49 114 aa10.29□□□□□ -0.76
NME3-211ENST00000568561 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
NME3-211ENST00000568561 GCGP01275 180 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms