RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TMEM86BQ8N661 226 aa13.66□□□□□ -0.22
SMPD3-211ENST00000568373 HOXD3P31249 432 aaPredicted RBP13.65□□□□□ -0.22
SMPD3-211ENST00000568373 FA2HQ7L5A8 372 aa13.65□□□□□ -0.22
SMPD3-211ENST00000568373 APRG1Q8IVJ8 170 aa13.65□□□□□ -0.22
SMPD3-211ENST00000568373 RNF185Q96GF1 192 aa13.65□□□□□ -0.22
SMPD3-211ENST00000568373 MS4A6AQ9H2W1 248 aa13.65□□□□□ -0.22
SMPD3-211ENST00000568373 WFDC3Q8IUB2 231 aa13.65□□□□□ -0.22
SMPD3-211ENST00000568373 OR10AG1Q8NH19 301 aa13.65□□□□□ -0.22
SMPD3-211ENST00000568373 TMEM70Q9BUB7 260 aa13.65□□□□□ -0.22
SMPD3-211ENST00000568373 SNAI2O43623 268 aa13.64□□□□□ -0.23
SMPD3-211ENST00000568373 IFI27P40305 119 aaPredicted RBP13.64□□□□□ -0.23
SMPD3-211ENST00000568373 KLHDC1Q8N7A1 406 aa13.64□□□□□ -0.23
SMPD3-211ENST00000568373 SIGLEC8Q9NYZ4 499 aa13.64□□□□□ -0.23
SMPD3-211ENST00000568373 LOC389332A0A1B0GUA5 103 aa13.63□□□□□ -0.23
SMPD3-211ENST00000568373 SMKR1H3BMG3 65 aa13.63□□□□□ -0.23
SMPD3-211ENST00000568373 CRXO43186 299 aaPredicted RBP13.63□□□□□ -0.23
SMPD3-211ENST00000568373 PPBPP02775 128 aa13.63□□□□□ -0.23
SMPD3-211ENST00000568373 LINC00173Q6ZV60 143 aa13.63□□□□□ -0.23
SMPD3-211ENST00000568373 SETXQ7Z333 2677 aaKnown RBP13.62□□□□□ -0.23
SMPD3-211ENST00000568373 IGHV4-4A0A075B6R2 117 aa13.62□□□□□ -0.23
SMPD3-211ENST00000568373 NCR2O95944 276 aa13.62□□□□□ -0.23
SMPD3-211ENST00000568373 NPYP01303 97 aa13.62□□□□□ -0.23
SMPD3-211ENST00000568373 RNASE4P34096 147 aaKnown RBP13.62□□□□□ -0.23
SMPD3-211ENST00000568373 H3BVH4 76 aa13.62□□□□□ -0.23
SMPD3-211ENST00000568373 CACNG7P62955 275 aa13.62□□□□□ -0.23
SMPD3-211ENST00000568373 HSPB8Q9UJY1 196 aa13.62□□□□□ -0.23
SMPD3-211ENST00000568373 SYS1-DBNDD2H3BUS1 97 aa13.61□□□□□ -0.23
SMPD3-211ENST00000568373 TFPI2P48307 235 aa13.61□□□□□ -0.23
SMPD3-211ENST00000568373 KIR3DS1Q14943 382 aa13.61□□□□□ -0.23
SMPD3-211ENST00000568373 SPATA12Q7Z6I5 190 aa13.61□□□□□ -0.23
SMPD3-211ENST00000568373 K7EQG2 157 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 ZNF688P0C7X2 276 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 SNRPD3P62318 126 aaKnown RBP13.6□□□□□ -0.23
SMPD3-211ENST00000568373 SPATA45Q537H7 98 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 SPANXN1Q5VSR9 72 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 C18orf65Q6ZTR6 163 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 LAMTOR2Q9Y2Q5 125 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 KLLNB2CW77 178 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 TCF21O43680 179 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 EVI2AP22794 236 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 ANXA2RQ3ZCQ2 193 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 SMIM15Q7Z3B0 74 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 ATOH7Q8N100 152 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 MIEN1Q9BRT3 115 aa13.6□□□□□ -0.23
SMPD3-211ENST00000568373 FOSL1P15407 271 aa13.59□□□□□ -0.23
SMPD3-211ENST00000568373 DEFB136Q30KP8 78 aa13.59□□□□□ -0.23
SMPD3-211ENST00000568373 PSMG4Q5JS54 123 aa13.59□□□□□ -0.23
SMPD3-211ENST00000568373 MAP1LC3CQ9BXW4 147 aa13.59□□□□□ -0.23
SMPD3-211ENST00000568373 DNAJC9-AS1A6NH13 148 aa13.59□□□□□ -0.23
SMPD3-211ENST00000568373 KRTAP1-1Q07627 177 aa13.59□□□□□ -0.23
SMPD3-211ENST00000568373 ASIPP42127 132 aa13.58□□□□□ -0.24
SMPD3-211ENST00000568373 SLURP1P55000 103 aa13.58□□□□□ -0.24
SMPD3-211ENST00000568373 TCTEX1D4Q5JR98 221 aa13.58□□□□□ -0.24
SMPD3-211ENST00000568373 C4orf3Q8WVX3 66 aa13.58□□□□□ -0.24
SMPD3-211ENST00000568373 FOXC2Q99958 501 aa13.58□□□□□ -0.24
SMPD3-211ENST00000568373 A0A096LNJ9 63 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 GAS8-AS1O95177 125 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 S100A4P26447 101 aaKnown RBP13.57□□□□□ -0.24
SMPD3-211ENST00000568373 Q6ZSV7 163 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 MAP1LC3AQ9H492 121 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 TIMM8BQ9Y5J9 83 aaPredicted RBP13.57□□□□□ -0.24
SMPD3-211ENST00000568373 C20orf202A1L168 122 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 LINC01619G3V211 115 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 TNFRSF6BO95407 300 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 MED14OSP0DP75 135 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 ADAMTSL5Q6ZMM2 481 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 ZNF705AQ6ZN79 300 aaPredicted RBP13.57□□□□□ -0.24
SMPD3-211ENST00000568373 ODF3Q96PU9 254 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 ZNF747Q9BV97 191 aa13.57□□□□□ -0.24
SMPD3-211ENST00000568373 OTOGQ6ZRI0 2925 aa13.56□□□□□ -0.24
SMPD3-211ENST00000568373 TRAV9-2A0A087WT02 112 aa13.56□□□□□ -0.24
SMPD3-211ENST00000568373 A0A0J9YX75 114 aa13.56□□□□□ -0.24
SMPD3-211ENST00000568373 PET117Q6UWS5 81 aa13.56□□□□□ -0.24
SMPD3-211ENST00000568373 ACANP16112 2415 aa13.56□□□□□ -0.24
SMPD3-211ENST00000568373 CD5LO43866 347 aa13.55□□□□□ -0.24
SMPD3-211ENST00000568373 MAJINQ3KP22 176 aa13.55□□□□□ -0.24
SMPD3-211ENST00000568373 OR11H1Q8NG94 326 aa13.55□□□□□ -0.24
SMPD3-211ENST00000568373 SCRT2Q9NQ03 307 aa13.55□□□□□ -0.24
SMPD3-211ENST00000568373 OR4C46A6NHA9 309 aa13.55□□□□□ -0.24
SMPD3-211ENST00000568373 KHDC1LQ5JSQ8 128 aa13.55□□□□□ -0.24
SMPD3-211ENST00000568373 GNRH2O43555 120 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 GATA1P15976 413 aaPredicted RBP13.54□□□□□ -0.24
SMPD3-211ENST00000568373 LEPP41159 167 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 DPF1Q92782 380 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 ESM1Q9NQ30 184 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 PHLDA3Q9Y5J5 127 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 LINC01546A6NGU7 62 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 M0R381 172 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 HBDP02042 147 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 OR1N2Q8NGR9 330 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 WFDC12Q8WWY7 111 aa13.54□□□□□ -0.24
SMPD3-211ENST00000568373 IGLC3P0DOY3 106 aa13.53□□□□□ -0.24
SMPD3-211ENST00000568373 RNASE3P12724 160 aaKnown RBP13.53□□□□□ -0.24
SMPD3-211ENST00000568373 LBHQ53QV2 105 aaPredicted RBP13.53□□□□□ -0.24
SMPD3-211ENST00000568373 OR2K2Q8NGT1 345 aa13.53□□□□□ -0.24
SMPD3-211ENST00000568373 NXT2Q9NPJ8 142 aaKnown RBP13.53□□□□□ -0.24
SMPD3-211ENST00000568373 YAE1D1Q9NRH1 226 aa13.53□□□□□ -0.24
SMPD3-211ENST00000568373 NF1P21359 2839 aa13.53□□□□□ -0.24
SMPD3-211ENST00000568373 C7orf71A4D174 169 aa13.52□□□□□ -0.24
SMPD3-211ENST00000568373 FAM159AQ6UWV7 190 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms