RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 C11orf71Q6IPW1 123 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 E7EQL1 145 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 GAS8-AS1O95177 125 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 IGHV1-46P01743 117 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 EGR2P11161 476 aaPredicted RBP4.21□□□□□ -1.73
LINC01541-202ENST00000568095 EDN2P20800 178 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 PLNP26678 52 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 GAGE5Q13069 117 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 GAGE6Q13070 117 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 DIAPH2-AS1Q14236 149 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 VMA21Q3ZAQ7 101 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 PPDPFLQ8WWR9 84 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 DLX4Q92988 240 aaPredicted RBP4.21□□□□□ -1.73
LINC01541-202ENST00000568095 FAM110AQ9BQ89 295 aa4.21□□□□□ -1.73
LINC01541-202ENST00000568095 CRYBG3Q68DQ2 2970 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 TRAV40A0A0B4J280 105 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 MYMXA0A1B0GTQ4 84 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 HOXA3O43365 443 aaPredicted RBP4.21□□□□□ -1.74
LINC01541-202ENST00000568095 DLX6P56179 175 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 TEN1Q86WV5 123 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 FAM216BQ8N7L0 139 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 CCL13Q99616 98 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 FOXC2Q99958 501 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 MRPL35Q9NZE8 188 aaKnown RBP4.21□□□□□ -1.74
LINC01541-202ENST00000568095 TENM4Q6N022 2769 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 CELSR2Q9HCU4 2923 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 ASH1LQ9NR48 2969 aaKnown RBP4.21□□□□□ -1.74
LINC01541-202ENST00000568095 A0A1W2PPR1 153 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 LYZP61626 148 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 HCP5Q6MZN7 132 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 IL17RELQ6ZVW7 336 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 ZNF491Q8N8L2 437 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 PRR25Q96S07 402 aa4.21□□□□□ -1.74
LINC01541-202ENST00000568095 UTP20O75691 2785 aaKnown RBP4.2□□□□□ -1.74
LINC01541-202ENST00000568095 F8WDY8 70 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 PRSS1P07477 247 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 GNLYP22749 145 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 RPL27AP46776 148 aaKnown RBP4.2□□□□□ -1.74
LINC01541-202ENST00000568095 ZNF80P51504 273 aaPredicted RBP4.2□□□□□ -1.74
LINC01541-202ENST00000568095 TMEM200BQ69YZ2 307 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 C11orf44Q8N8P7 122 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 NRACQ8N912 160 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 HIST1H4GQ99525 98 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 ANKHD1Q8IWZ3 2542 aaKnown RBP4.2□□□□□ -1.74
LINC01541-202ENST00000568095 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.2□□□□□ -1.74
LINC01541-202ENST00000568095 RHODO00212 210 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 LGALS1P09382 135 aaKnown RBP4.2□□□□□ -1.74
LINC01541-202ENST00000568095 CD7P09564 240 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 COX6B1P14854 86 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 ZNF843Q8N446 348 aa4.2□□□□□ -1.74
LINC01541-202ENST00000568095 C19orf84I3L1E1 186 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 ZNF688P0C7X2 276 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 PPIFP30405 207 aaKnown RBP4.19□□□□□ -1.74
LINC01541-202ENST00000568095 PLGLAQ15195 96 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 Q6Q795 121 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 OR11H6Q8NGC7 330 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 MSRB1Q9NZV6 116 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 SIGLEC9Q9Y336 463 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 IGHV4-4A0A075B6R2 117 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 NCBP2LA6PVI3 153 aaKnown RBP4.19□□□□□ -1.74
LINC01541-202ENST00000568095 C17orf100A8MU93 164 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 F8VRH5 84 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 K7EIM0 57 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 M0R3E3 92 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 SPRY3O43610 288 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 DTX2Q86UW9 622 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 RASL11BQ9BPW5 248 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 SS18L2Q9UHA2 77 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 USP9XQ93008 2570 aaPredicted RBP4.19□□□□□ -1.74
LINC01541-202ENST00000568095 ANK3Q12955 4377 aaKnown RBP4.19□□□□□ -1.74
LINC01541-202ENST00000568095 DOPEY1Q5JWR5 2465 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 TRBV20-1A0A075B6N2 111 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 TRAV25A0A0B4J276 109 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 LINC01548A6NM66 108 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 USP17L23D6RBM5 183 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 TMEM262E9PQX1 116 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 H7C1H1 209 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 IL4P05112 153 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 CCL3L1P16619 93 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 LAGE3Q14657 143 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 ZFAND6Q6FIF0 208 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 NEXN-AS1Q8NBZ9 246 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 LINC01560Q8TB33 94 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 RPEQ96AT9 228 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 AJUBAQ96IF1 538 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 ANAPC13Q9BS18 74 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 RAB1BQ9H0U4 201 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 UBTD1Q9HAC8 227 aa4.19□□□□□ -1.74
LINC01541-202ENST00000568095 TMSB15BA0A087X1C1 80 aa4.18□□□□□ -1.74
LINC01541-202ENST00000568095 IGHV3-21A0A0B4J1V1 117 aa4.18□□□□□ -1.74
LINC01541-202ENST00000568095 SLC25A16P16260 332 aa4.18□□□□□ -1.74
LINC01541-202ENST00000568095 TNFAIP6P98066 277 aaPredicted RBP4.18□□□□□ -1.74
LINC01541-202ENST00000568095 ZFP2Q6ZN57 461 aa4.18□□□□□ -1.74
LINC01541-202ENST00000568095 MYOZ3Q8TDC0 251 aa4.18□□□□□ -1.74
LINC01541-202ENST00000568095 NAV3Q8IVL0 2385 aa4.18□□□□□ -1.74
LINC01541-202ENST00000568095 RP1L1Q8IWN7 2480 aaPredicted RBP4.18□□□□□ -1.74
LINC01541-202ENST00000568095 TRBV7-9A0A0J9YWB2 115 aa4.18□□□□□ -1.74
LINC01541-202ENST00000568095 GATA1P15976 413 aaPredicted RBP4.18□□□□□ -1.74
LINC01541-202ENST00000568095 ASIPP42127 132 aa4.18□□□□□ -1.74
LINC01541-202ENST00000568095 SPANXA1Q9NS26 97 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms