RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 A0A087WX48 190 aa10.32□□□□□ -0.76
CLK3-217ENST00000566126 CAV2P51636 162 aa10.32□□□□□ -0.76
CLK3-217ENST00000566126 MIC13Q5XKP0 118 aa10.32□□□□□ -0.76
CLK3-217ENST00000566126 HOXB5P09067 269 aa10.31□□□□□ -0.76
CLK3-217ENST00000566126 CNBPP62633 177 aaKnown RBP10.31□□□□□ -0.76
CLK3-217ENST00000566126 Q6ZRG5 221 aa10.31□□□□□ -0.76
CLK3-217ENST00000566126 OR1L4Q8NGR5 311 aa10.31□□□□□ -0.76
CLK3-217ENST00000566126 C15orf40Q8WUR7 153 aa10.31□□□□□ -0.76
CLK3-217ENST00000566126 SMIM8Q96KF7 97 aa10.31□□□□□ -0.76
CLK3-217ENST00000566126 SAMD10Q9BYL1 202 aa10.31□□□□□ -0.76
CLK3-217ENST00000566126 RAB26Q9ULW5 256 aa10.31□□□□□ -0.76
CLK3-217ENST00000566126 SSSCA1O60232 199 aa10.3□□□□□ -0.76
CLK3-217ENST00000566126 NCS1P62166 190 aa10.3□□□□□ -0.76
CLK3-217ENST00000566126 IGHV3-64A0A075B6Q5 118 aa10.29□□□□□ -0.76
CLK3-217ENST00000566126 CTDSPLO15194 276 aa10.29□□□□□ -0.76
CLK3-217ENST00000566126 CAMLGP49069 296 aa10.29□□□□□ -0.76
CLK3-217ENST00000566126 SMIM4Q8WVI0 70 aa10.29□□□□□ -0.76
CLK3-217ENST00000566126 PFDN5Q99471 154 aa10.29□□□□□ -0.76
CLK3-217ENST00000566126 C20orf85Q9H1P6 137 aa10.29□□□□□ -0.76
CLK3-217ENST00000566126 SCP2D1Q9UJQ7 156 aa10.29□□□□□ -0.76
CLK3-217ENST00000566126 PGPA6NDG6 321 aa10.28□□□□□ -0.76
CLK3-217ENST00000566126 DIRC3C9JPN6 131 aa10.28□□□□□ -0.76
CLK3-217ENST00000566126 H7C1H1 209 aa10.28□□□□□ -0.76
CLK3-217ENST00000566126 TAAR5O14804 337 aa10.28□□□□□ -0.76
CLK3-217ENST00000566126 DMRTA1Q5VZB9 504 aa10.28□□□□□ -0.76
CLK3-217ENST00000566126 MZT2AQ6P582 158 aa10.28□□□□□ -0.76
CLK3-217ENST00000566126 NRARPQ7Z6K4 114 aa10.28□□□□□ -0.76
CLK3-217ENST00000566126 C12orf45Q8N5I9 185 aaPredicted RBP10.28□□□□□ -0.76
CLK3-217ENST00000566126 ATP5SQ99766 215 aa10.28□□□□□ -0.76
CLK3-217ENST00000566126 GPN1Q9HCN4 374 aaPredicted RBP10.28□□□□□ -0.76
CLK3-217ENST00000566126 SLC39A9Q9NUM3 307 aa10.28□□□□□ -0.76
CLK3-217ENST00000566126 MUC21A0A0G2JKD1 596 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 RBAKDNA6NC62 111 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 PGPEP1LA6NFU8 196 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 CRPP02741 224 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 TMEM128Q5BJH2 165 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 ZNF506Q5JVG8 444 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 KRTAP26-1Q6PEX3 210 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 LINC00479Q96M42 142 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 GGACTQ9BVM4 153 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 SDF2L1Q9HCN8 221 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 LENEPQ9Y5L5 61 aa10.27□□□□□ -0.77
CLK3-217ENST00000566126 SLPIP03973 132 aa10.26□□□□□ -0.77
CLK3-217ENST00000566126 VAMP1P23763 118 aa10.26□□□□□ -0.77
CLK3-217ENST00000566126 MRPS10P82664 201 aaKnown RBP10.26□□□□□ -0.77
CLK3-217ENST00000566126 KCNIP4Q6PIL6 250 aa10.26□□□□□ -0.77
CLK3-217ENST00000566126 C15orf54Q8N8G6 183 aa10.26□□□□□ -0.77
CLK3-217ENST00000566126 OR2T35Q8NGX2 323 aa10.26□□□□□ -0.77
CLK3-217ENST00000566126 ANKRD20A5PA0PJZ0 165 aa10.25□□□□□ -0.77
CLK3-217ENST00000566126 VBP1P61758 197 aa10.25□□□□□ -0.77
CLK3-217ENST00000566126 C14orf178Q8N769 122 aaPredicted RBP10.25□□□□□ -0.77
CLK3-217ENST00000566126 CLRN3Q8NCR9 226 aa10.25□□□□□ -0.77
CLK3-217ENST00000566126 SLC25A2Q9BXI2 301 aa10.25□□□□□ -0.77
CLK3-217ENST00000566126 VCX3BQ9H321 246 aa10.25□□□□□ -0.77
CLK3-217ENST00000566126 TRAV21A0A0B4J279 112 aa10.24□□□□□ -0.77
CLK3-217ENST00000566126 FGF8P55075 233 aaPredicted RBP10.24□□□□□ -0.77
CLK3-217ENST00000566126 LYPD6BQ8NI32 183 aa10.24□□□□□ -0.77
CLK3-217ENST00000566126 ASB13Q8WXK3 278 aa10.24□□□□□ -0.77
CLK3-217ENST00000566126 C9orf85Q96MD7 179 aa10.24□□□□□ -0.77
CLK3-217ENST00000566126 MIXL1Q9H2W2 232 aa10.24□□□□□ -0.77
CLK3-217ENST00000566126 PARLQ9H300 379 aa10.24□□□□□ -0.77
CLK3-217ENST00000566126 MCUBQ9NWR8 336 aa10.24□□□□□ -0.77
CLK3-217ENST00000566126 FAM231BA6NCW3 169 aa10.23□□□□□ -0.77
CLK3-217ENST00000566126 SFT2D2O95562 160 aa10.23□□□□□ -0.77
CLK3-217ENST00000566126 NBEAP1P0C6P0 100 aa10.23□□□□□ -0.77
CLK3-217ENST00000566126 PRR4Q16378 134 aa10.23□□□□□ -0.77
CLK3-217ENST00000566126 ZFP2Q6ZN57 461 aa10.23□□□□□ -0.77
CLK3-217ENST00000566126 PTH2Q96A98 100 aa10.23□□□□□ -0.77
CLK3-217ENST00000566126 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
CLK3-217ENST00000566126 KCNS1Q96KK3 526 aa10.23□□□□□ -0.77
CLK3-217ENST00000566126 FAM167A-AS1Q96KT0 104 aa10.23□□□□□ -0.77
CLK3-217ENST00000566126 TSC22D2O75157 780 aa10.22□□□□□ -0.77
CLK3-217ENST00000566126 RPL29P47914 159 aaKnown RBP10.22□□□□□ -0.77
CLK3-217ENST00000566126 PPP1R1AQ13522 171 aa10.22□□□□□ -0.77
CLK3-217ENST00000566126 MIAQ16674 131 aa10.22□□□□□ -0.77
CLK3-217ENST00000566126 MPV17L2Q567V2 206 aa10.22□□□□□ -0.77
CLK3-217ENST00000566126 hDV102S1A0JD36 115 aa10.21□□□□□ -0.77
CLK3-217ENST00000566126 TMEM262E9PQX1 116 aa10.21□□□□□ -0.77
CLK3-217ENST00000566126 F6UZH7 168 aa10.21□□□□□ -0.77
CLK3-217ENST00000566126 CCSO14618 274 aa10.21□□□□□ -0.77
CLK3-217ENST00000566126 TCRBP04435 133 aa10.21□□□□□ -0.77
CLK3-217ENST00000566126 UFSP1Q6NVU6 142 aa10.21□□□□□ -0.77
CLK3-217ENST00000566126 DYNC2LI1Q8TCX1 351 aa10.21□□□□□ -0.77
CLK3-217ENST00000566126 ANGP03950 147 aaKnown RBP10.2□□□□□ -0.78
CLK3-217ENST00000566126 SMIM18P0DKX4 95 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 CSN1S1P47710 185 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 TAS2R30P59541 319 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 MAJINQ3KP22 176 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 GCSAMLQ5JQS6 135 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 OR10G7Q8NGN6 311 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 TMED6Q8WW62 240 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 AP3S1Q92572 193 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 FXYD5Q96DB9 178 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 TVP23CQ96ET8 276 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 C11orf21Q9P2W6 132 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 WDR83OSQ9Y284 106 aa10.2□□□□□ -0.78
CLK3-217ENST00000566126 MUC17Q685J3 4493 aa10.19□□□□□ -0.78
CLK3-217ENST00000566126 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.19□□□□□ -0.78
CLK3-217ENST00000566126 TRAV26-2A0A0B4J265 109 aa10.19□□□□□ -0.78
CLK3-217ENST00000566126 COX6A2Q02221 97 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms